Clone Sequence Records
BS16863.complete Sequence
2744 bp assembled on 2009-12-08
GenBank Submission: KX804827
> BS16863.complete
GAAGTTATCAGTCGACATGGACTCCCTGGCCATCTTCATTTTCCTGTGGG
CCGTTCTGGCCCTCTTCTCCGTGTGGCTAATCAAGCTGCTCTACCACAAG
TATCTCAACAAGGACAAGTCGGCCAGTGCGGCCAACAGTCGCCAGACGAG
CGTGGCCCCCACATCCGGATCACCCACGTCCGTCGCCGGCAAGACGGAGA
AACGTCTCTCGGAGCCGCGCGATCTCCTGGCCACCAAGAGCAAGGTTGAA
GGCTTGGACTTATCCAAGCCTCTGGCCGGCGCATCCGGTGGCCGAGGACG
TTCATCAGCATCGCCATTGAATACCGCTGGTGCAGCTGCCGGCGGTCCAC
GTCGTCGGGTGGTGCGTCAGAGTTCCACTGGGCCAGAGAATCGCAAGAAG
CGCTATGTCCCACCGCCATCGAATGTCGTGGGTCCAGAAACGAGCTCCGT
CACCTGGACCAGCCAAGTGTTTCGCTGGCTTTATAGCGACCTGGTCATCG
TCAACGAGCTGCTCATGTCCTGGGTAATCGCCATCAACGACACGCTGCGC
AAGTCTGTGGAGGAGCATGGAGTGGCCGTTGAAGTGGTTCGAGTGCTACC
CGACAGTCCTGCCCCCGGATTGAATAATATATTTTGTAATTGCGATGAAA
ACAATCCCGCTGATATGCTCATCACCTTTGACTGCGATGCAATGCCGGTG
TTGCAGGTGAAGACCTTCCGCCAAAAGTCGGGCAAGGTGGAGACCTCCCA
CTACAAGGTCACCGTGTCTAGGTTCCGCGCCCGTATGGCCATTCCCATGA
ACTACAACAGCCTCAAGGGTGAGATGCGAGTCGAGGGCTATCCGGATGTT
CGCATCGCGATGAACAGCGTGGGTGCCATCAAGGCAATGGATCAGGATGA
ACAGCAATTGCAGACGGTGATCAGCGACATCCTGACGACGGCTTTGCGCG
ACACCATCTATCCGGTGGACTTCTCCATTTACTCCACCTGTCCAAGGGCC
GAAGTGGAGCCCCTGGACCTGCCCCACAACATGGAGCAGCACATGGGTGG
CGTGGGATTGAGGGATTCGCAACACATGGTTTCCGGCCGTCGGCTGCTGG
TGAAGATCGTCAAGGGCGATGGAATAAGGGATGCCCAGAATCCCTACGTG
GTCATCGAGATGGACGAGCCGGCCCAGAAGAATCAGACGGGTACTCAGCG
CGGCGGCAAACCCTTCTGGGATGAGCACTTCCTCTTTGAACTCTCCCCTC
AATCAGCTGAGATCCTGTTCGAGGTGTATGACCATCCGGTGATTGCCTCA
GATCCGCCCAAGTTTCTGGGTCTCGGCCTGGTTGGAATCGATGAGCTGGC
CGTTGGACCCGCATCCACTCAACTGTTGCAGCTGCAACCACGCCCCTATG
AGACGCAGCCCGTTTCGGGAGCCATCACCGTGGACTTTGTGTTCATTGAG
GGTGCCGAAATCCCGGCGGGCGCACGTCCACAGCGTCTCAAGGAGGCACT
GCGTCTCAGCACACCGGCCATTAACGAACACATCCGAAATGGAGCAGATC
TAGCGGATGCAGCCGTAAGAGCTCTGCAGGATGGAGCGCTCTCGAGCAGC
GGAAGTGGCGGACAACCCAGCAAGAGCACTTTGATCATCCACAGTGTGCA
GCGGAATTCAAGCAGCCCGAATGCATTTAAGGTCGAGTTGAATAGAGATG
GCCAAATCGAGGTGACCGATACGGCGACGGAATTGGATCAGGCAGTGGCT
CAGGCATTCGAACGTGCCGCCAATGAGGCACAAACCGAACTTGAGCTGGA
GCTGGCCAAGGAGGAGAAGTCCAGCCAGCTGGGTGAGCCTCTCATCGATT
CAGGTAATGGCACCGTCAACGAGGAAAGCACCGCTGAGTTTGGCCAGCCC
AATGCCGCCTCATCGCCCAATGGCAGTAGTTACCACAACAACTATAGCCT
CAATGGCAATGGTAACTCGAATGGCGCCGGTTCGGGCGGATATAACAGTC
TGCCACGAAACGGTGGTGCCCAGCAGCTGGCTCAGCAATCCGGATTATTG
GAGGGCCATGACGTGGTCGATGATCGCGGGCGCAGCAAAAAACGTAATTT
CTTTGGCACCCTGAAGAAGCGGCTCAGCCGCTCCAAGACACGCACCCTCT
CGGCCGATCAACCTAATAATAACAGTCATAAGTCACTATCAGCCACCAAC
TCGAATACAACAACAGCCACCGGATTCCCTCGAACAGCCACCGGAACCCT
CAATGGACCACGCATGGGCATTGGTCACTCCATCACCGACCACTCACGTC
GCTCCTCAATTTCAGAATCCTCGGCCATCTCAGGCTTTTCCTCGGCTAGC
AATAAAACCTACGTGCACGAGGCCTCCACCCTGGTGCTGGAGACCATCGA
GAATGGCATAAAGCGCCACTTCATTGTGCCTTTGGCCATCGCCCAGAGAC
CGCGCTGGCGTCGCAAGGGCACCAAGCTGCACATCTACAACGATCACACC
TTCATCGCCAAGCATTTGAGCGGAAGCGGTCTGCAGTGCTCCATCTGTAT
GAAGTCCATCCCGCGGAGGCCCGGAAAGCAGGGCTACGAGTGTCGCGACT
GCCAGCTGATTAGTCACAAGCAGTGCCACATACGGGCACCACAAGCATGT
CCCAATCCCACGGTGCTCTCCATGGAACTAACTAAACTCAATTCAGCGGC
GGCAGATCGCAGCATACGGAAGCTGTGAAAGCTTTCTAGACCAT
BS16863.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:48:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10737-RE | 2712 | CG10737-PE | 1..2712 | 17..2728 | 13560 | 100 | Plus |
| CG10737-RN | 2775 | CG10737-PN | 64..2729 | 17..2682 | 13330 | 100 | Plus |
| CG10737-RR | 2682 | CG10737-PR | 1..2663 | 17..2679 | 13315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:48:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10737-RE | 3516 | CG10737-RE | 449..3161 | 17..2729 | 13565 | 100 | Plus |
| CG10737-RN | 3107 | CG10737-RN | 303..2968 | 17..2682 | 13330 | 100 | Plus |
| CG10737-RR | 3204 | CG10737-RR | 449..3111 | 17..2679 | 13315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:48:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19170736..19171161 | 17..442 | 2130 | 100 | Plus |
| 2R | 25286936 | 2R | 19173704..19174121 | 1237..1654 | 2090 | 100 | Plus |
| 2R | 25286936 | 2R | 19174880..19175249 | 1887..2256 | 1850 | 100 | Plus |
| 2R | 25286936 | 2R | 19173432..19173643 | 1025..1236 | 1060 | 100 | Plus |
| 2R | 25286936 | 2R | 19174575..19174783 | 1680..1888 | 1045 | 100 | Plus |
| 2R | 25286936 | 2R | 19172344..19172526 | 667..849 | 915 | 100 | Plus |
| 2R | 25286936 | 2R | 19172712..19172888 | 848..1024 | 885 | 100 | Plus |
| 2R | 25286936 | 2R | 19176187..19176347 | 2255..2415 | 805 | 100 | Plus |
| 2R | 25286936 | 2R | 19176587..19176743 | 2523..2679 | 785 | 100 | Plus |
| 2R | 25286936 | 2R | 19171252..19171375 | 442..565 | 620 | 100 | Plus |
| 2R | 25286936 | 2R | 19176415..19176523 | 2415..2523 | 545 | 100 | Plus |
| 2R | 25286936 | 2R | 19172177..19172280 | 564..667 | 520 | 100 | Plus |
| 2R | 25286936 | 2R | 19177819..19177868 | 2680..2729 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:48:08 has no hits.
BS16863.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:29 Download gff for
BS16863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-RE | 445..3155 | 17..2727 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:11 Download gff for
BS16863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-RE | 449..3159 | 17..2727 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:54:31 Download gff for
BS16863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-RE | 445..3155 | 17..2727 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:08 Download gff for
BS16863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-RE | 449..3159 | 17..2727 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:08 Download gff for
BS16863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19176416..19176523 | 2416..2523 | 100 | -> | Plus |
| 2R | 19176588..19176743 | 2524..2679 | 100 | -> | Plus |
| 2R | 19177819..19177866 | 2680..2727 | 100 | | Plus |
| 2R | 19170736..19171161 | 17..442 | 100 | -> | Plus |
| 2R | 19171253..19171375 | 443..565 | 100 | -> | Plus |
| 2R | 19172179..19172280 | 566..667 | 100 | -> | Plus |
| 2R | 19172345..19172524 | 668..847 | 100 | -> | Plus |
| 2R | 19172712..19172888 | 848..1024 | 100 | -> | Plus |
| 2R | 19173432..19173643 | 1025..1236 | 100 | -> | Plus |
| 2R | 19173704..19174121 | 1237..1654 | 100 | -> | Plus |
| 2R | 19174339..19174365 | 1655..1681 | 100 | -> | Plus |
| 2R | 19174577..19174783 | 1682..1888 | 100 | -> | Plus |
| 2R | 19174882..19175248 | 1889..2255 | 100 | -> | Plus |
| 2R | 19176188..19176347 | 2256..2415 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:11 Download gff for
BS16863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15058241..15058666 | 17..442 | 100 | -> | Plus |
| arm_2R | 15058758..15058880 | 443..565 | 100 | -> | Plus |
| arm_2R | 15059684..15059785 | 566..667 | 100 | -> | Plus |
| arm_2R | 15059850..15060029 | 668..847 | 100 | -> | Plus |
| arm_2R | 15060217..15060393 | 848..1024 | 100 | -> | Plus |
| arm_2R | 15060937..15061148 | 1025..1236 | 100 | -> | Plus |
| arm_2R | 15061209..15061626 | 1237..1654 | 100 | -> | Plus |
| arm_2R | 15061844..15061870 | 1655..1681 | 100 | -> | Plus |
| arm_2R | 15062082..15062288 | 1682..1888 | 100 | -> | Plus |
| arm_2R | 15062387..15062753 | 1889..2255 | 100 | -> | Plus |
| arm_2R | 15063693..15063852 | 2256..2415 | 100 | -> | Plus |
| arm_2R | 15063921..15064028 | 2416..2523 | 100 | -> | Plus |
| arm_2R | 15064093..15064248 | 2524..2679 | 100 | -> | Plus |
| arm_2R | 15065324..15065371 | 2680..2727 | 100 | | Plus |
BS16863.3prime Sequence
920 bp (847 high quality bases) assembled on 2007-05-15
> BS16863.3prime
ATGGTCTAGAAAGCTTTCACAGCTTCCGTATGCTGCGATCTGCCGCCGCT
GAATTGAGTTTAGTTAGTTCCATGGAGAGCACCGTGGGATTGGGACATGC
TTGTGGTGCCCGTATGTGGCACTGCTTGTGACTAATCAGCTGGCAGTCGC
GACACTCGTAGCCCTGCTTTCCGGGCCTCCGCGGGATGGACTTCATACAG
ATGGAGCACTGCAGACCGCTTCCGCTCAAATGCTTGGCGATGAAGGTGTG
ATCGTTGTAGATGTGCAGCTTGGTGCCCTTGCGACGCCAGCGCGGTCTCT
GGGCGATGGCCAAAGGCACAATGAAGTGGCGCTTTATGCCATTCTCGATG
GTCTCCAGCACCAGGGTGGAGGCCTCGTGCACGTAGGTTTTATTGCTAGC
CGAGGAAAAGCCTGAGATGGCCGAGGATTCTGAAATTGAGGAGCGACGTG
AGTGGTCGGTGATGGAGTGACCAATGCCCATGCGTGGTCCATTGAGGGTT
CCGGTGGCTGTTCGAGGGAATCCGGTGGCTGTTGTTGTATTCGAGTTGGT
GGCTGATAGTGACTTATGACTGTTATTATTAGGTTGATCGGCCGAGAGGG
TGCGTGTCTTGGAGCGGCTGAGCCGCTTCTTCAGGGTGCCAAAGAAATTA
CGTTTTTTGCTGCGCCCGCGATCATCGACCACGTCATGGCCCTCCAATAA
TCCGGATTGCTGAGCCAGCTGCTGGGCACCACCGTTTCGTGGCAGACTGT
TATATCCGCCCGAACCGGCGCCATTCGAGTTACCATTGCCATTGAGGCTA
TAGTTGTTGTGGTAACTACTGCCATTGGGCGATGAGGCGGCATTGGGCTG
GCAAACTCAGCGGTGCTTTCCTCGTTGACGGTGCCATTACCTGAATCGAT
GAGAGGCTTCACCAGCTGGC
BS16863.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10737-PE | 2712 | CG10737-RE | 1877..2712 | 852..17 | 4180 | 100 | Minus |
| CG10737-PB | 2613 | CG10737-RB | 2141..2613 | 489..17 | 2365 | 100 | Minus |
| CG10737-PD | 2835 | CG10737-RD | 2361..2789 | 491..63 | 2145 | 100 | Minus |
| CG10737-PC | 2835 | CG10737-RC | 2361..2789 | 491..63 | 2145 | 100 | Minus |
| CG10737-PA | 2613 | CG10737-RA | 2141..2567 | 489..63 | 2135 | 100 | Minus |
| CG10737-PD | 2835 | CG10737-RD | 1940..2303 | 852..489 | 1820 | 100 | Minus |
| CG10737-PC | 2835 | CG10737-RC | 1940..2303 | 852..489 | 1820 | 100 | Minus |
| CG10737-PB | 2613 | CG10737-RB | 1940..2141 | 852..651 | 1010 | 100 | Minus |
| CG10737-PA | 2613 | CG10737-RA | 1940..2141 | 852..651 | 1010 | 100 | Minus |
| CG10737-PE | 2712 | CG10737-RE | 1820..1876 | 908..852 | 285 | 100 | Minus |
| CG10737-PD | 2835 | CG10737-RD | 1883..1939 | 908..852 | 285 | 100 | Minus |
| CG10737-PC | 2835 | CG10737-RC | 1883..1939 | 908..852 | 285 | 100 | Minus |
| CG10737-PB | 2613 | CG10737-RB | 1883..1939 | 908..852 | 285 | 100 | Minus |
| CG10737-PA | 2613 | CG10737-RA | 1883..1939 | 908..852 | 285 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:11:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10737-RE | 3516 | CG10737-RE | 2256..3161 | 920..16 | 4460 | 99.7 | Minus |
| CG10737-RN | 3107 | CG10737-RN | 2110..2968 | 920..63 | 4225 | 99.7 | Minus |
| CG10737-RR | 3204 | CG10737-RR | 2256..3111 | 920..66 | 4210 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:11:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19174886..19175249 | 852..489 | 1820 | 100 | Minus |
| 2R | 25286936 | 2R | 19176187..19176347 | 490..330 | 805 | 100 | Minus |
| 2R | 25286936 | 2R | 19176587..19176743 | 222..66 | 785 | 100 | Minus |
| 2R | 25286936 | 2R | 19176415..19176523 | 330..222 | 545 | 100 | Minus |
| 2R | 25286936 | 2R | 19174719..19174783 | 920..856 | 280 | 95.4 | Minus |
| 2R | 25286936 | 2R | 19177819..19177868 | 65..16 | 250 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 21:11:50 has no hits.
BS16863.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:26:00 Download gff for
BS16863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-PE | 1808..2712 | 17..920 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:30:18 Download gff for
BS16863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-RE | 2256..3161 | 16..920 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:55:43 Download gff for
BS16863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-RE | 2256..3161 | 16..920 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:55:43 Download gff for
BS16863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19176188..19176347 | 330..489 | 100 | -> | Minus |
| 2R | 19174719..19174783 | 856..920 | 96 | -> | Minus |
| 2R | 19174882..19175248 | 490..855 | 99 | -> | Minus |
| 2R | 19176416..19176523 | 222..329 | 100 | -> | Minus |
| 2R | 19176588..19176743 | 66..221 | 100 | -> | Minus |
| 2R | 19177819..19177868 | 16..65 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:30:18 Download gff for
BS16863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15064093..15064248 | 66..221 | 100 | -> | Minus |
| arm_2R | 15065324..15065373 | 16..65 | 100 | | Minus |
| arm_2R | 15062224..15062288 | 856..920 | 96 | -> | Minus |
| arm_2R | 15062387..15062753 | 490..855 | 99 | -> | Minus |
| arm_2R | 15063693..15063852 | 330..489 | 100 | -> | Minus |
| arm_2R | 15063921..15064028 | 222..329 | 100 | -> | Minus |
BS16863.5prime Sequence
897 bp (820 high quality bases) assembled on 2007-05-15
> BS16863.5prime
GAAGTTATCAGTCGACATGGACTCCCTGGCCATCTTCATTTTCCTGTGGG
CCGTTCTGGCCCTCTTCTCCGTGTGGCTAATCAAGCTGCTCTACCACAAG
TATCTCAACAAGGACAAGTCGGCCAGTGCGGCCAACAGTCGCCAGACGAG
CGTGGCCCCCACATCCGGATCACCCACGTCCGTCGCCGGCAAGACGGAGA
AACGTCTCTCGGAGCCGCGCGATCTCCTGGCCACCAAGAGCAAGGTTGAA
GGCTTGGACTTATCCAAGCCTCTGGCCGGCGCATCCGGTGGCCGAGGACG
TTCATCAGCATCGCCATTGAATACCGCTGGTGCAGCTGCCGGCGGTCCAC
GTCGTCGGGTGGTGCGTCAGAGTTCCACTGGGCCAGAGAATCGCAAGAAG
CGCTATGTCCCACCGCCATCGAATGTCGTGGGTCCAGAAACGAGCTCCGT
CACCTGGACCAGCCAAGTGTTTCGCTGGCTTTATAGCGACCTGGTCATCG
TCAACGAGCTGCTCATGTCCTGGGTAATCGCCATCAACGACACGCTGCGC
AAGTCTGTGGAGGAGCATGGAGTGGCCGTTGAAGTGGTTCGAGTGCTACC
CGACAGTCCTGCCCCCGGATTGAATAATATATTTTGTAATTGCGATGAAA
ACAATCCCGCTGATATGCTCATCACCTTTGACTGCGATGCAATGCCGGTG
TTGCAGGTGAAGACCTTCCGCCAAAAGTCGGGCAAGGTGGAGACCTCCCA
CTACAAGGTCACCGTGTCTAGGTTCCGCGCCCGTATGGCCATTCCCATGA
ACTACAACAGCCTCAAGGGTGAGATGCGAGTCGAGGGCTATCCGGATGTT
CGCATCGCGATGAACAGCGTGGGTGCCATCAANGCAATGGATCANGA
BS16863.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10737-PB | 2613 | CG10737-RB | 64..941 | 17..894 | 4371 | 99.8 | Plus |
| CG10737-PD | 2835 | CG10737-RD | 64..941 | 17..894 | 4371 | 99.8 | Plus |
| CG10737-PC | 2835 | CG10737-RC | 64..941 | 17..894 | 4371 | 99.8 | Plus |
| CG10737-PA | 2613 | CG10737-RA | 64..941 | 17..894 | 4371 | 99.8 | Plus |
| CG10737-PE | 2712 | CG10737-RE | 1..878 | 17..894 | 4371 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:39:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10737-RN | 3107 | CG10737-RN | 303..1180 | 17..894 | 4379 | 99.9 | Plus |
| CG10737-RO | 3430 | CG10737-RO | 303..1180 | 17..894 | 4379 | 99.9 | Plus |
| CG10737-RP | 2981 | CG10737-RP | 84..961 | 17..894 | 4379 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:39:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19170736..19171161 | 17..442 | 2130 | 100 | Plus |
| 2R | 25286936 | 2R | 19172344..19172526 | 667..849 | 915 | 100 | Plus |
| 2R | 25286936 | 2R | 19171252..19171375 | 442..565 | 620 | 100 | Plus |
| 2R | 25286936 | 2R | 19172177..19172280 | 564..667 | 520 | 100 | Plus |
| 2R | 25286936 | 2R | 19172712..19172758 | 848..894 | 224 | 97.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:39:05 has no hits.
BS16863.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:20:23 Download gff for
BS16863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-PE | 1..879 | 17..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:47:34 Download gff for
BS16863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-RP | 84..962 | 17..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:23:25 Download gff for
BS16863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10737-RP | 84..962 | 17..896 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:23:25 Download gff for
BS16863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19171253..19171375 | 443..565 | 100 | -> | Plus |
| 2R | 19172179..19172280 | 566..667 | 100 | -> | Plus |
| 2R | 19172345..19172524 | 668..847 | 100 | -> | Plus |
| 2R | 19172712..19172759 | 848..896 | 95 | | Plus |
| 2R | 19170736..19171161 | 17..442 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:47:34 Download gff for
BS16863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15058241..15058666 | 17..442 | 100 | -> | Plus |
| arm_2R | 15058758..15058880 | 443..565 | 100 | -> | Plus |
| arm_2R | 15059684..15059785 | 566..667 | 100 | -> | Plus |
| arm_2R | 15059850..15060029 | 668..847 | 100 | -> | Plus |
| arm_2R | 15060217..15060264 | 848..896 | 95 | | Plus |
BS16863.pep Sequence
Translation from 16 to 2727
> BS16863.pep
MDSLAIFIFLWAVLALFSVWLIKLLYHKYLNKDKSASAANSRQTSVAPTS
GSPTSVAGKTEKRLSEPRDLLATKSKVEGLDLSKPLAGASGGRGRSSASP
LNTAGAAAGGPRRRVVRQSSTGPENRKKRYVPPPSNVVGPETSSVTWTSQ
VFRWLYSDLVIVNELLMSWVIAINDTLRKSVEEHGVAVEVVRVLPDSPAP
GLNNIFCNCDENNPADMLITFDCDAMPVLQVKTFRQKSGKVETSHYKVTV
SRFRARMAIPMNYNSLKGEMRVEGYPDVRIAMNSVGAIKAMDQDEQQLQT
VISDILTTALRDTIYPVDFSIYSTCPRAEVEPLDLPHNMEQHMGGVGLRD
SQHMVSGRRLLVKIVKGDGIRDAQNPYVVIEMDEPAQKNQTGTQRGGKPF
WDEHFLFELSPQSAEILFEVYDHPVIASDPPKFLGLGLVGIDELAVGPAS
TQLLQLQPRPYETQPVSGAITVDFVFIEGAEIPAGARPQRLKEALRLSTP
AINEHIRNGADLADAAVRALQDGALSSSGSGGQPSKSTLIIHSVQRNSSS
PNAFKVELNRDGQIEVTDTATELDQAVAQAFERAANEAQTELELELAKEE
KSSQLGEPLIDSGNGTVNEESTAEFGQPNAASSPNGSSYHNNYSLNGNGN
SNGAGSGGYNSLPRNGGAQQLAQQSGLLEGHDVVDDRGRSKKRNFFGTLK
KRLSRSKTRTLSADQPNNNSHKSLSATNSNTTTATGFPRTATGTLNGPRM
GIGHSITDHSRRSSISESSAISGFSSASNKTYVHEASTLVLETIENGIKR
HFIVPLAIAQRPRWRRKGTKLHIYNDHTFIAKHLSGSGLQCSICMKSIPR
RPGKQGYECRDCQLISHKQCHIRAPQACPNPTVLSMELTKLNSAAADRSI
RKL*
BS16863.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:58:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10737-PE | 903 | CG10737-PE | 1..903 | 1..903 | 4638 | 100 | Plus |
| CG10737-PO | 944 | CG10737-PO | 22..944 | 1..903 | 4607 | 97.8 | Plus |
| CG10737-PN | 924 | CG10737-PN | 22..910 | 1..889 | 4574 | 100 | Plus |
| CG10737-PR | 893 | CG10737-PR | 1..888 | 1..888 | 4569 | 100 | Plus |
| CG10737-PC | 944 | CG10737-PC | 22..930 | 1..889 | 4543 | 97.8 | Plus |
