Clone Sequence Records
BS16947.complete Sequence
3368 bp assembled on 2009-12-08
GenBank Submission: KX806058
> BS16947.complete
GAAGTTATCAGTCGACATGGCAGCGGCACATGAATCGCCTAAAGCACGCG
ATTCGACCAACGTCGAGACTGAGCGGACGTTTCAGCTGGAGGCAGGGCAA
TCCTATGACACAATGGCAGAATCTCATCGCGCATTCCATTCCCTGGAATT
GGAGGCGGGAGCGGAGGTAGCCGTAGATGCCGCTGTTGAAGCTGACTCAA
AAAGACAAAACGATAATCAACTGCAGTCGTTGGAACCCATTTCCTTGGAT
GACATACCCGAACCAATAAAAGTCCTCGACGAGATTATTTCCGAATTTGA
GGAGGCAGCAACGAAACCAGTGGCCTTGAACTGCAATAGTGGCGAGAATC
AGTCCGAGGACGATGGCTACATGAGCCTAAGTCGCAAGAACATGTCCAAA
AAGGATTCCGAAGATGTGCCCCAAACACCCAGCACAGACACTGTGCCAGA
GGGAAGCTTCAACGAAGTGGATGGTACGGCTGAGAATCTAACTAAATTAT
CTGAGGTTGTACACGGACAGGAAACTACATCGCCTCTCATTCAGACAACG
CTGCCAAAGGCTAGAGGATCTAGCTCAACTCCTGCCGTAAGCTCAAACTA
CTCTAGTTTACCGTGCTGTGGTGTCAGGGCTTCGAATTTGGGTGGAGTTT
CTGCTGCCAATTCATCAAGTGGATTGTCAGCCATCCGGCATCCAGGCAGC
TGCAACGGGGGTCGCAACGCACTGGGCATCGACATTAGCGCTGTTCATAA
CGCTGTTCTGCGTGGTAATTTGGCGAAGCTGCCGGAACCATTCGTCAACG
AACATCCAGTGACGATATACCCAGGTCCCTCTTCTAAGACAGCCGTGGGG
GAGGGAGCTCGCTGCAAGCGACTACTCAGCTCTGTCGAAAAGCACAAGGA
AGTGTGCCACATGCTAAATCCACTATCCAGCGGCTCAAACTCTTCGTCCG
GGGAGGCTTCGCCTGCTGCGTCTCACGTCAATGTGGCGAAATCAAAAGCT
GCTGCCAGGGATGACGAATATTCGGAAGATTCGCTGGAGGAGTCAACCAT
CTCTACTGAACTTACACCCGTTAAACAGAACGGAGTCGCCTGGGAGATTC
ACTTTAGAAACAGCAAGAAGAAATCCAGTGGCTTCAAAAATACGTCTGCA
TCTAAAACGGTGCGATCGTTAATAGTTTTTAACATCGTTAAGAAAAGCAA
CAATTTAGACGACAGTTTCATGTACAACGAAAGAAGCATGCTGGGCAAAG
GGACTTTTATTATCCGTCGCTCCACAGCCAAAAAACCGCCTCGTGTCACA
GATGTATTTTGTATACCAAAGCCACCACGTTCCTCGTTGGCCGAGGGAGT
CGGGCCAGAGACCAAAGTTGGAGCCGGGGCGATCAGTAATGAGTTCTACA
CAAGCGATAGCGAGCAAAGCGATGCCACACCCCTACCACCACCGCTGCCA
CCAGCTTCACCTGACATAAACTTCGTGTACAAGGAGTGTGAGGCTAATGT
GGAGCATACACGCCGGGGATTGGAGATGGTCGTCGCACACCGAGCGATCT
TATCTCTTGATATCGAGGCACCAGAACAACTTGGCTATTGCAAGCCTGTG
AAGAGTAAGACGGCGATGCTAACAGAAAAGCGCCTGAGTGCCGAGTCCAT
GCCGGACAACACATCCAGCAGCGAAGAGTTCGAAGAGGCTCGTCTGAACG
GAATCGGCAGCTACGAGTTGTATGGTTACAACGGTAACGATCAGCGAGCT
TCCAATGCCACCACTCCGCATACAGATTTGGCCCCAACTCTGGAGGAGGA
CGAAGAACTTTCAGATTTAAGCTATGGGTGTGCTCCACTGATGCAAATAG
AGCATAACATCAGTGCTTTGTTGCGTGGAGACCTTCCAATTATCGGCCAA
CCGGCTGAGAGGAAAGGAGGTGGGCTTACTGGTGCCGCAACGACAGCTGC
CGAGCAGCATGCAAAGCGGGTGCTAGAATTTCGACATGGCGTTCACAAGT
CTGAAAGCGCCAAGGAGATGCTGCTGTCACAGATGCCCAGTTTGGGCCCA
CTGCCACCATCGCCGCCGAATTCCAACCCGGATTTATTTGACTACAATGC
CCCTCTTCCACCGTCACCGGTGGAGCCGCGAAAGCAGCTAGAGCTCCCTG
TAGTGCCGAATGCCCCTCCCGCGAATCGGGGCACTACCGTAGTGGAGGTG
CATGCCACCGCCTCTGGTACGGCGGTGCACAGTAGCAACAGCCACACTCG
CCGCAGTCGGGACAATATCGCCTCTGTGCGTCACTTTACCGACGAGCTGC
CACCGCCTCCAGCGCCTTCCCACCAATCGGCCAGCTTCTTAGAGGGCAAC
GGCGGACCACCTACGGTCCCCCCACATCGAGTGACTGGAGGTCATTCGGC
TAATACAATGAAATCCTGGAGTATCGACTCGCAATACCGCAAGAAATCGC
CAAAGCTATTTGGTCATTATAGCAGCGGTGGCAGTGGGATAACCACACCC
ACTGGTCTGGGACCGATTGCTCCACTGCCCCCTCCACATTTCGACGGAAT
GGCAGGTGGATCTGGGTCCTACCATCGTCGTTATATTAACTATGGCACCA
AGCGCAGCCTAAAGCAGTCGCCGCGCGAAGAGCATCGCCTGCAAACCTCA
TGTAGTCTTCCTGAAACGCCAATTTTTGCCAGAGGCTGTGACATACCACG
TACCCCATATCGACGCCAAAATGAGCCCCTGCCTGTGGTCAGTGGCTCCC
GCACAGCGCCCAGATCGAGCACATCGAACAGCATCAACATGGGCGCTTCA
ATTTTGGGGATCGGAGGTGGTAACTATGGTACAGCCCAAATTTGCCGTCA
GCGCTCAATAAATCATGCCTTGGCCTCCAACGAAATGCTTCGCATGACCG
GGGCCCCGGCTCGAGGATGGTATCCCAAGCAACGGGGAATGCGACCCGTC
TCCACCGAGAACATAGATCGAATGGCTTCCATGCGGGTGTGGGACAATCC
GACGGTCATGTCGGGCACCGGACAATCTCGTAAGCCTTTAACACTGCCAC
CAAATCTTACACCTTCCTTCTTGAATAAATCACCCCGCGAGGCTCTACGG
CGTGTTACTAGTTTGCTGATAACCAAAAAAAAAAACAGCAAAGATCGAAA
ACATAAGGCGTACTGCGATCAGCTTATGGATGATAGCAACAGCAAGCATG
TCTATGAATTTGAATCGGGATCCACCACGCGAAAGGATACCAATCGCAAA
GACAATGGAGCCTCGGGGGCGACCACGAATAACAAACCTAAAAAAAAGGG
GCTTTTTAAATCTCTTTGGAAACGCTCCAAAACGGTCTCTTTAGATCAGT
AAAAGCTTTCTAGACCAT
BS16947.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:53:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2225-RG | 3336 | CG2225-PG | 1..3336 | 17..3352 | 16680 | 100 | Plus |
| CG2225-RA | 3336 | CG2225-PA | 1..3336 | 17..3352 | 16680 | 100 | Plus |
| CG2225-RE | 3336 | CG2225-PE | 1..3336 | 17..3352 | 16680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:53:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2225-RG | 5627 | CG2225-RG | 636..3973 | 17..3354 | 16690 | 100 | Plus |
| CG2225-RA | 5390 | CG2225-RA | 399..3736 | 17..3354 | 16690 | 100 | Plus |
| CG2225-RE | 5246 | CG2225-RE | 255..3592 | 17..3354 | 16690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:53:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21668293..21669239 | 2685..1739 | 4735 | 100 | Minus |
| 2L | 23513712 | 2L | 21670533..21671141 | 1161..553 | 3045 | 100 | Minus |
| 2L | 23513712 | 2L | 21669367..21669915 | 1739..1191 | 2745 | 100 | Minus |
| 2L | 23513712 | 2L | 21666063..21666379 | 3131..2815 | 1585 | 100 | Minus |
| 2L | 23513712 | 2L | 21672857..21673050 | 210..17 | 970 | 100 | Minus |
| 2L | 23513712 | 2L | 21672290..21672469 | 390..211 | 900 | 100 | Minus |
| 2L | 23513712 | 2L | 21671229..21671391 | 553..391 | 815 | 100 | Minus |
| 2L | 23513712 | 2L | 21665460..21665596 | 3354..3218 | 685 | 100 | Minus |
| 2L | 23513712 | 2L | 21668105..21668237 | 2817..2685 | 665 | 100 | Minus |
| 2L | 23513712 | 2L | 21665917..21666004 | 3219..3132 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:53:53 has no hits.
BS16947.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:54 Download gff for
BS16947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-RA | 399..3732 | 17..3350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:00:51 Download gff for
BS16947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-RE | 255..3588 | 17..3350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:07:09 Download gff for
BS16947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-RA | 399..3732 | 17..3350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:27 Download gff for
BS16947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-RE | 255..3588 | 17..3350 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:27 Download gff for
BS16947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21665464..21665595 | 3219..3350 | 100 | <- | Minus |
| 2L | 21665918..21666004 | 3132..3218 | 100 | <- | Minus |
| 2L | 21666063..21666377 | 2817..3131 | 100 | <- | Minus |
| 2L | 21668106..21668236 | 2686..2816 | 100 | <- | Minus |
| 2L | 21668293..21669238 | 1740..2685 | 100 | <- | Minus |
| 2L | 21669367..21669913 | 1193..1739 | 100 | <- | Minus |
| 2L | 21670449..21670481 | 1160..1192 | 100 | <- | Minus |
| 2L | 21670535..21671140 | 554..1159 | 100 | <- | Minus |
| 2L | 21671229..21671391 | 391..553 | 100 | <- | Minus |
| 2L | 21672290..21672469 | 211..390 | 100 | <- | Minus |
| 2L | 21672857..21673050 | 17..210 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:00:51 Download gff for
BS16947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21665464..21665595 | 3219..3350 | 100 | <- | Minus |
| arm_2L | 21665918..21666004 | 3132..3218 | 100 | <- | Minus |
| arm_2L | 21666063..21666377 | 2817..3131 | 100 | <- | Minus |
| arm_2L | 21668106..21668236 | 2686..2816 | 100 | <- | Minus |
| arm_2L | 21668293..21669238 | 1740..2685 | 100 | <- | Minus |
| arm_2L | 21669367..21669913 | 1193..1739 | 100 | <- | Minus |
| arm_2L | 21670449..21670481 | 1160..1192 | 100 | <- | Minus |
| arm_2L | 21670535..21671140 | 554..1159 | 100 | <- | Minus |
| arm_2L | 21671229..21671391 | 391..553 | 100 | <- | Minus |
| arm_2L | 21672290..21672469 | 211..390 | 100 | <- | Minus |
| arm_2L | 21672857..21673050 | 17..210 | 100 | | Minus |
BS16947.3prime Sequence
855 bp (824 high quality bases) assembled on 2007-05-15
> BS16947.3prime
ATGGTCTAGAAAGCTTTTACTGATCTAAAGAGACCGTTTTGGAGCGTTTC
CAAAGAGATTTAAAAAGCCCCTTTTTTTTAGGTTTGTTATTCGTGGTCGC
CCCCGAGGCTCCATTGTCTTTGCGATTGGTATCCTTTCGCGTGGTGGATC
CCGATTCAAATTCATAGACATGCTTGCTGTTGCTATCATCCATAAGCTGA
TCGCAGTACGCCTTATGTTTTCGATCTTTGCTGTTTTTTTTTTTGGTTAT
CAGCAAACTAGTAACACGCCGTAGAGCCTCGCGGGGTGATTTATTCAAGA
AGGAAGGTGTAAGATTTGGTGGCAGTGTTAAAGGCTTACGAGATTGTCCG
GTGCCCGACATGACCGTCGGATTGTCCCACACCCGCATGGAAGCCATTCG
ATCTATGTTCTCGGTGGAGACGGGTCGCATTCCCCGTTGCTTGGGATACC
ATCCTCGAGCCGGGGCCCCGGTCATGCGAAGCATTTCGTTGGAGGCCAAG
GCATGATTTATTGAGCGCTGACGGCAAATTTGGGCTGTACCATAGTTACC
ACCTCCGATCCCCAAAATTGAAGCGCCCATGTTGATGCTGTTCGATGTGC
TCGATCTGGGCGCTGTGCGGGAGCCACTGACCACAGGCAGGGGCTCATTT
TGGCGTCGATATGGGGTACGTGGTATGTCACAGCCTCTGGCAAAAATTGG
CGTTTCAGGAAGACTACATGAGGTTTGCAGGCGATGCTCTTCGCGCGGCG
ACTGCTTTAGGCTGCGCTTGGTGCCATAGTTAATATAACGACGATGGTAG
GACCCAGATCCACCTGCCATTCCGTCGAAATGTGGAGGGGGCAGTGGAGC
AATCG
BS16947.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:40:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2225-PE | 3336 | CG2225-RE | 2498..3336 | 855..17 | 4195 | 100 | Minus |
| CG2225-PB | 3303 | CG2225-RB | 2465..3303 | 855..17 | 4195 | 100 | Minus |
| CG2225-PA | 3336 | CG2225-RA | 2498..3336 | 855..17 | 4195 | 100 | Minus |
| CG2225-PF | 2928 | CG2225-RF | 2090..2928 | 855..17 | 4195 | 100 | Minus |
| CG2225-PC | 2133 | CG2225-RC | 1295..2133 | 855..17 | 4195 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:18:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2225-RG | 5627 | CG2225-RG | 3133..3973 | 855..15 | 4205 | 100 | Minus |
| CG2225-RH | 5213 | CG2225-RH | 2719..3559 | 855..15 | 4205 | 100 | Minus |
| CG2225-RC | 3912 | CG2225-RC | 1418..2258 | 855..15 | 4205 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:18:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21666063..21666379 | 238..554 | 1585 | 100 | Plus |
| 2L | 23513712 | 2L | 21668293..21668464 | 684..855 | 860 | 100 | Plus |
| 2L | 23513712 | 2L | 21665460..21665596 | 15..151 | 685 | 100 | Plus |
| 2L | 23513712 | 2L | 21668105..21668237 | 552..684 | 665 | 100 | Plus |
| 2L | 23513712 | 2L | 21665917..21666004 | 150..237 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:18:05 has no hits.
BS16947.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:40:45 Download gff for
BS16947.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-PC | 1295..2133 | 17..855 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:29:27 Download gff for
BS16947.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-RC | 1418..2258 | 15..855 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:40:42 Download gff for
BS16947.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-RC | 1418..2258 | 15..855 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:40:42 Download gff for
BS16947.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21665460..21665595 | 15..150 | 100 | <- | Plus |
| 2L | 21665918..21666004 | 151..237 | 100 | <- | Plus |
| 2L | 21666063..21666377 | 238..552 | 100 | <- | Plus |
| 2L | 21668106..21668236 | 553..683 | 100 | <- | Plus |
| 2L | 21668293..21668464 | 684..855 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:29:27 Download gff for
BS16947.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21665460..21665595 | 15..150 | 100 | <- | Plus |
| arm_2L | 21665918..21666004 | 151..237 | 100 | <- | Plus |
| arm_2L | 21666063..21666377 | 238..552 | 100 | <- | Plus |
| arm_2L | 21668106..21668236 | 553..683 | 100 | <- | Plus |
| arm_2L | 21668293..21668464 | 684..855 | 100 | | Plus |
BS16947.5prime Sequence
862 bp (835 high quality bases) assembled on 2007-05-15
> BS16947.5prime
GAAGTTATCAGTCGACATGGCAGCGGCACATGAATCGCCTAAAGCACGCG
ATTCGACCAACGTCGAGACTGAGCGGACGTTTCAGCTGGAGGCAGGGCAA
TCCTATGACACAATGGCAGAATCTCATCGCGCATTCCATTCCCTGGAATT
GGAGGCGGGAGCGGAGGTAGCCGTAGATGCCGCTGTTGAAGCTGACTCAA
AAAGACAAAACGATAATCAACTGCAGTCGTTGGAACCCATTTCCTTGGAT
GACATACCCGAACCAATAAAAGTCCTCGACGAGATTATTTCCGAATTTGA
GGAGGCAGCAACGAAACCAGTGGCCTTGAACTGCAATAGTGGCGAGAATC
AGTCCGAGGACGATGGCTACATGAGCCTAAGTCGCAAGAACATGTCCAAA
AAGGATTCCGAAGATGTGCCCCAAACACCCAGCACAGACACTGTGCCAGA
GGGAAGCTTCAACGAAGTGGATGGTACGGCTGAGAATCTAACTAAATTAT
CTGAGGTTGTACACGGACAGGAAACTACATCGCCTCTCATTCAGACAACG
CTGCCAAAGGCTAGAGGATCTAGCTCAACTCCTGCCGTAAGCTCAAACTA
CTCTAGTTTACCGTGCTGTGGTGTCAGGGCTTCGAATTTGGGTGGAGTTT
CTGCTGCCAATTCATCAAGTGGATTGTCAGCCATCCGGCATCCAGGCAGC
TGCAACGGGGGTCGCAACGCACTGGGCATCGACATTAGCGCTGTTCATAA
CGCTGTTCTGCGTGGTAATTTGGCGAAGCTGCCGGAACCATTCGTCAACG
AACATCCAGTGACGATATACCCAGGTCCCTCTTCTAAGACAGCCGTGGGG
GAGGGAGCTCGC
BS16947.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2225-PE | 3336 | CG2225-RE | 1..846 | 17..862 | 4230 | 100 | Plus |
| CG2225-PB | 3303 | CG2225-RB | 1..846 | 17..862 | 4230 | 100 | Plus |
| CG2225-PA | 3336 | CG2225-RA | 1..846 | 17..862 | 4230 | 100 | Plus |
| CG2225-PF | 2928 | CG2225-RF | 1..471 | 392..862 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2225-RG | 5627 | CG2225-RG | 636..1481 | 17..862 | 4230 | 100 | Plus |
| CG2225-RH | 5213 | CG2225-RH | 255..1100 | 17..862 | 4230 | 100 | Plus |
| CG2225-RA | 5390 | CG2225-RA | 399..1244 | 17..862 | 4230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:10:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21670832..21671141 | 862..553 | 1550 | 100 | Minus |
| 2L | 23513712 | 2L | 21672857..21673050 | 210..17 | 970 | 100 | Minus |
| 2L | 23513712 | 2L | 21672290..21672469 | 390..211 | 900 | 100 | Minus |
| 2L | 23513712 | 2L | 21671229..21671391 | 553..391 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:10:20 has no hits.
BS16947.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:34:09 Download gff for
BS16947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-PA | 1..846 | 17..862 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:28:34 Download gff for
BS16947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-RA | 395..1244 | 9..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:39:24 Download gff for
BS16947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2225-RA | 395..1244 | 9..862 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:39:24 Download gff for
BS16947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21670832..21671140 | 554..862 | 100 | <- | Minus |
| 2L | 21671229..21671391 | 391..553 | 100 | <- | Minus |
| 2L | 21672290..21672469 | 211..390 | 100 | <- | Minus |
| 2L | 21672857..21673054 | 9..210 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:28:34 Download gff for
BS16947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21670832..21671140 | 554..862 | 100 | <- | Minus |
| arm_2L | 21671229..21671391 | 391..553 | 100 | <- | Minus |
| arm_2L | 21672290..21672469 | 211..390 | 100 | <- | Minus |
| arm_2L | 21672857..21673054 | 9..210 | 98 | | Minus |
BS16947.pep Sequence
Translation from 16 to 3351
> BS16947.pep
MAAAHESPKARDSTNVETERTFQLEAGQSYDTMAESHRAFHSLELEAGAE
VAVDAAVEADSKRQNDNQLQSLEPISLDDIPEPIKVLDEIISEFEEAATK
PVALNCNSGENQSEDDGYMSLSRKNMSKKDSEDVPQTPSTDTVPEGSFNE
VDGTAENLTKLSEVVHGQETTSPLIQTTLPKARGSSSTPAVSSNYSSLPC
CGVRASNLGGVSAANSSSGLSAIRHPGSCNGGRNALGIDISAVHNAVLRG
NLAKLPEPFVNEHPVTIYPGPSSKTAVGEGARCKRLLSSVEKHKEVCHML
NPLSSGSNSSSGEASPAASHVNVAKSKAAARDDEYSEDSLEESTISTELT
PVKQNGVAWEIHFRNSKKKSSGFKNTSASKTVRSLIVFNIVKKSNNLDDS
FMYNERSMLGKGTFIIRRSTAKKPPRVTDVFCIPKPPRSSLAEGVGPETK
VGAGAISNEFYTSDSEQSDATPLPPPLPPASPDINFVYKECEANVEHTRR
GLEMVVAHRAILSLDIEAPEQLGYCKPVKSKTAMLTEKRLSAESMPDNTS
SSEEFEEARLNGIGSYELYGYNGNDQRASNATTPHTDLAPTLEEDEELSD
LSYGCAPLMQIEHNISALLRGDLPIIGQPAERKGGGLTGAATTAAEQHAK
RVLEFRHGVHKSESAKEMLLSQMPSLGPLPPSPPNSNPDLFDYNAPLPPS
PVEPRKQLELPVVPNAPPANRGTTVVEVHATASGTAVHSSNSHTRRSRDN
IASVRHFTDELPPPPAPSHQSASFLEGNGGPPTVPPHRVTGGHSANTMKS
WSIDSQYRKKSPKLFGHYSSGGSGITTPTGLGPIAPLPPPHFDGMAGGSG
SYHRRYINYGTKRSLKQSPREEHRLQTSCSLPETPIFARGCDIPRTPYRR
QNEPLPVVSGSRTAPRSSTSNSINMGASILGIGGGNYGTAQICRQRSINH
ALASNEMLRMTGAPARGWYPKQRGMRPVSTENIDRMASMRVWDNPTVMSG
TGQSRKPLTLPPNLTPSFLNKSPREALRRVTSLLITKKKNSKDRKHKAYC
DQLMDDSNSKHVYEFESGSTTRKDTNRKDNGASGATTNNKPKKKGLFKSL
WKRSKTVSLDQ*
BS16947.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:53:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2225-PG | 1111 | CG2225-PG | 1..1111 | 1..1111 | 5781 | 100 | Plus |
| CG2225-PA | 1111 | CG2225-PA | 1..1111 | 1..1111 | 5781 | 100 | Plus |
| CG2225-PE | 1111 | CG2225-PE | 1..1111 | 1..1111 | 5781 | 100 | Plus |
| CG2225-PH | 1100 | CG2225-PH | 1..1100 | 1..1111 | 5709 | 99 | Plus |
| CG2225-PB | 1100 | CG2225-PB | 1..1100 | 1..1111 | 5709 | 99 | Plus |
