Clone Sequence Records
BS17045.3prime Sequence
558 bp (558 high quality bases) assembled on 2007-05-15
> BS17045.3prime
ATGGTCTAGAAAGCTTCTAAAGATCCTTGTGCGAGAACTTTAAGTGAAAT
TTGCAGGCCTTCTCCGTGTAAAAACATTCGCCGCAGAAGCCGCACTTGAA
GGCCGGTCCGGAGTCGCTGCTGAACTCGTTGGTGGGAGTAGCAGCTCTTT
TGGTCGACACTGCTTCCGCCAGCACCGTGGGCAGTTGCTCATTCTTCGGT
TCCACCGGATGAGTTTGGGTTTGCGTGTGCGACTGGGATTTGCTGGCCTG
GCTGCGCCTTCGGCGCTGCTCGAACTTTAGGGCCACGTTGAACTCGCCGT
GGGCGCCCAGCCACTGGTGGCTGAACTCGTAGGCCATCGACAGCTTCTTC
ACGCAGATGCGGCAGATCTGTTTGGGATAGTCGTCCTCTGGGTCCAGTGG
CGGCAAGGAGGCGGGCAGGCAGGACGCTAGCATATCCGCAATGGGCACCA
TCTGGTCAAGCACTTGGGCACACTCATTGTAAATGGACAGCGATTCCAGG
CATTCGTTTCCGCACGTGCGACAGAAGCTCTCGAATATGTCCATGTCGAC
TGATAACT
BS17045.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15367-PA | 528 | Dip1-RA | 1..528 | 544..17 | 2640 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:55:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip1-RA | 691 | CG15367-RA | 56..584 | 544..16 | 2645 | 100 | Minus |
| Dip1-RB | 694 | CG15367-RB | 56..587 | 544..16 | 2605 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:55:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9158677..9159076 | 544..145 | 2000 | 100 | Minus |
| X | 23542271 | X | 9159138..9159268 | 146..16 | 655 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:55:46 has no hits.
BS17045.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:57:22 Download gff for
BS17045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15367-PA | 1..528 | 17..544 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:34:49 Download gff for
BS17045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 52..593 | 8..552 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:26:06 Download gff for
BS17045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 52..593 | 8..552 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:06 Download gff for
BS17045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9158673..9159076 | 145..552 | 99 | -> | Minus |
| X | 9159140..9159277 | 8..144 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:34:49 Download gff for
BS17045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9052706..9053109 | 145..552 | 99 | -> | Minus |
| arm_X | 9053173..9053310 | 8..144 | 97 | | Minus |
BS17045.5prime Sequence
558 bp (558 high quality bases) assembled on 2007-05-15
> BS17045.5prime
GAAGTTATCAGTCGACATGGACATATTCGAGAGCTTCTGTCGCACGTGCG
GAAACGAATGCCTGGAATCGCTGTCCATTTACAATGAGTGTGCCCAAGTG
CTTGACCAGATGGTGCCCATTGCGGATATGCTAGCGTCCTGCCTGCCCGC
CTCCTTGCCGCCACTGGACCCAGAGGACGACTATCCCAAACAGATCTGCC
GCATCTGCGTGAAGAAGCTGTCGATGGCCTACGAGTTCAGCCACCAGTGG
CTGGGCGCCCACGGCGAGTTCAACGTGGCCCTAAAGTTCGAGCAGCGCCG
AAGGCGCAGCCAGGCCAGCAAATCCCAGTCGCACACGCAAACCCAAACTC
ATCCGGTGGAACCGAAGAATGAGCAACTGCCCACGGTGCTGGCGGAAGCA
GTGTCGACCAAAAGAGCTGCTACTCCCACCAACGAGTTCAGCAGCGACTC
CGGACCGGCCTTCAAGTGCGGCTTCTGCGGCGAATGTTTTTACACGGAGA
AGGCCTGCAAATTTCACTTAAAGTTCTCGCACAAGGATCTTTAGAAGCTT
TCTAGACC
BS17045.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:53:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15367-PA | 528 | Dip1-RA | 1..528 | 17..544 | 2640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:39:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip1-RA | 691 | CG15367-RA | 56..584 | 17..545 | 2645 | 100 | Plus |
| Dip1-RB | 694 | CG15367-RB | 56..587 | 17..545 | 2605 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9158677..9159076 | 17..416 | 2000 | 100 | Plus |
| X | 23542271 | X | 9159138..9159268 | 415..545 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:39:01 has no hits.
BS17045.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:53:45 Download gff for
BS17045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15367-PA | 1..528 | 17..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:49:14 Download gff for
BS17045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 52..593 | 9..553 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:13:42 Download gff for
BS17045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 52..593 | 9..553 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:13:42 Download gff for
BS17045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9158673..9159076 | 9..416 | 99 | -> | Plus |
| X | 9159140..9159277 | 417..553 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:49:14 Download gff for
BS17045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9052706..9053109 | 9..416 | 99 | -> | Plus |
| arm_X | 9053173..9053310 | 417..553 | 97 | | Plus |
BS17045.complete Sequence
560 bp assembled on 2007-05-08
GenBank Submission: FJ638233
> BS17045.complete
GAAGTTATCAGTCGACATGGACATATTCGAGAGCTTCTGTCGCACGTGCG
GAAACGAATGCCTGGAATCGCTGTCCATTTACAATGAGTGTGCCCAAGTG
CTTGACCAGATGGTGCCCATTGCGGATATGCTAGCGTCCTGCCTGCCCGC
CTCCTTGCCGCCACTGGACCCAGAGGACGACTATCCCAAACAGATCTGCC
GCATCTGCGTGAAGAAGCTGTCGATGGCCTACGAGTTCAGCCACCAGTGG
CTGGGCGCCCACGGCGAGTTCAACGTGGCCCTAAAGTTCGAGCAGCGCCG
AAGGCGCAGCCAGGCCAGCAAATCCCAGTCGCACACGCAAACCCAAACTC
ATCCGGTGGAACCGAAGAATGAGCAACTGCCCACGGTGCTGGCGGAAGCA
GTGTCGACCAAAAGAGCTGCTACTCCCACCAACGAGTTCAGCAGCGACTC
CGGACCGGCCTTCAAGTGCGGCTTCTGCGGCGAATGTTTTTACACGGAGA
AGGCCTGCAAATTTCACTTAAAGTTCTCGCACAAGGATCTTTAGAAGCTT
TCTAGACCAT
BS17045.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 21:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip1-RA | 528 | CG15367-PA | 1..528 | 17..544 | 2640 | 100 | Plus |
| Dip1-RB | 531 | CG15367-PB | 1..531 | 17..544 | 2575 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:03:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip1-RA | 691 | CG15367-RA | 56..584 | 17..545 | 2645 | 100 | Plus |
| Dip1-RB | 694 | CG15367-RB | 56..587 | 17..545 | 2580 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9158677..9159076 | 17..416 | 2000 | 100 | Plus |
| X | 23542271 | X | 9159138..9159268 | 415..545 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:03:19 has no hits.
BS17045.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:29:11 Download gff for
BS17045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 1..528 | 17..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:01:12 Download gff for
BS17045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 23..564 | 9..553 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:45 Download gff for
BS17045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 56..583 | 17..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:29:12 Download gff for
BS17045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 23..564 | 9..553 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:45 Download gff for
BS17045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 56..583 | 17..544 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:45 Download gff for
BS17045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9158677..9159076 | 17..416 | 100 | -> | Plus |
| X | 9159140..9159267 | 417..544 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:45 Download gff for
BS17045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9052710..9053109 | 17..416 | 100 | -> | Plus |
| arm_X | 9053173..9053300 | 417..544 | 100 | | Plus |
BS17045.pep Sequence
Translation from 16 to 543
> BS17045.pep
MDIFESFCRTCGNECLESLSIYNECAQVLDQMVPIADMLASCLPASLPPL
DPEDDYPKQICRICVKKLSMAYEFSHQWLGAHGEFNVALKFEQRRRRSQA
SKSQSHTQTQTHPVEPKNEQLPTVLAEAVSTKRAATPTNEFSSDSGPAFK
CGFCGECFYTEKACKFHLKFSHKDL*
BS17045.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:27:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip1-PA | 175 | CG15367-PA | 1..175 | 1..175 | 947 | 100 | Plus |
| Dip1-PB | 176 | CG15367-PB | 1..176 | 1..175 | 935 | 99.4 | Plus |
