Clone Sequence Records
BS17051.3prime Sequence
453 bp (453 high quality bases) assembled on 2007-05-15
> BS17051.3prime
ATGGTCTAGAAAGCTTTTATCCTCTGTGATTTCGAGTTCTTTGGCCCTTC
TTAACATCTGATAATCTTACTCCTTCGTAGCACTCGGAGATTTGCCAGGC
GAATTCACAAGACTCGTCATGGGATGTCTCGCTCTTAATCATATTACACG
TCGCTTCCATTCGCTCTACGGCTTCCGCGGTAACTATATGGCCTAGAACT
CGGTCAAAAGCACCGGGTATTATCTGGTTATCGGCGATAATGCCAATGTT
TTCTAGAAAACAGCGGAAAAAGCACTTGACACTATGGCCAGGGTCGTCGG
TCTCATGACGATTCGCAACATCTTGTGCTGTGATGCCCGCCGCCGCCATG
CATTGATCCTTAATGGGACCTGCTTGTACGAAACATGTTGGTAATGTAAC
GACGACTAACAATAATGCACAGCAGGTGAAAAAATGCATGTCGACTGATA
ACT
BS17051.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:57:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30448-PA | 423 | Obp56i-RA | 1..423 | 439..17 | 2115 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:50:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp56i-RA | 569 | CG30448-RA | 29..452 | 439..16 | 2120 | 100 | Minus |
Obp56i-RB | 938 | CG30448-RB | 458..821 | 379..16 | 1820 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:50:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19868234..19868597 | 379..16 | 1820 | 100 | Minus |
2R | 25286936 | 2R | 19868116..19868178 | 439..377 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:50:47 has no hits.
BS17051.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:57:45 Download gff for
BS17051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30448-PA | 1..423 | 17..439 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:51:25 Download gff for
BS17051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 29..452 | 16..439 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:27:22 Download gff for
BS17051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 29..452 | 16..439 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:27:22 Download gff for
BS17051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19868116..19868175 | 380..439 | 100 | -> | Minus |
2R | 19868234..19868597 | 16..379 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:51:25 Download gff for
BS17051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15755621..15755680 | 380..439 | 100 | -> | Minus |
arm_2R | 15755739..15756102 | 16..379 | 100 | | Minus |
BS17051.5prime Sequence
453 bp (453 high quality bases) assembled on 2007-05-15
> BS17051.5prime
GAAGTTATCAGTCGACATGCATTTTTTCACCTGCTGTGCATTATTGTTAG
TCGTCGTTACATTACCAACATGTTTCGTACAAGCAGGTCCCATTAAGGAT
CAATGCATGGCGGCGGCGGGCATCACAGCACAAGATGTTGCGAATCGTCA
TGAGACCGACGACCCTGGCCATAGTGTCAAGTGCTTTTTCCGCTGTTTTC
TAGAAAACATTGGCATTATCGCCGATAACCAGATAATACCCGGTGCTTTT
GACCGAGTTCTAGGCCATATAGTTACCGCGGAAGCCGTAGAGCGAATGGA
AGCGACGTGTAATATGATTAAGAGCGAGACATCCCATGACGAGTCTTGTG
AATTCGCCTGGCAAATCTCCGAGTGCTACGAAGGAGTAAGATTATCAGAT
GTTAAGAAGGGCCAAAGAACTCGAAATCACAGAGGATAAAAGCTTTCTAG
ACC
BS17051.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:54:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30448-PA | 423 | Obp56i-RA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:09:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp56i-RA | 569 | CG30448-RA | 29..452 | 17..440 | 2120 | 100 | Plus |
Obp56i-RB | 938 | CG30448-RB | 458..821 | 77..440 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:09:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19868234..19868597 | 77..440 | 1820 | 100 | Plus |
2R | 25286936 | 2R | 19868116..19868178 | 17..79 | 315 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:09:02 has no hits.
BS17051.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:54:06 Download gff for
BS17051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30448-PA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:29:42 Download gff for
BS17051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 29..452 | 17..440 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:46:38 Download gff for
BS17051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 29..452 | 17..440 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:46:38 Download gff for
BS17051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19868116..19868175 | 17..76 | 100 | -> | Plus |
2R | 19868234..19868597 | 77..440 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:29:42 Download gff for
BS17051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15755621..15755680 | 17..76 | 100 | -> | Plus |
arm_2R | 15755739..15756102 | 77..440 | 100 | | Plus |
BS17051.complete Sequence
455 bp assembled on 2007-05-08
GenBank Submission: FJ638236
> BS17051.complete
GAAGTTATCAGTCGACATGCATTTTTTCACCTGCTGTGCATTATTGTTAG
TCGTCGTTACATTACCAACATGTTTCGTACAAGCAGGTCCCATTAAGGAT
CAATGCATGGCGGCGGCGGGCATCACAGCACAAGATGTTGCGAATCGTCA
TGAGACCGACGACCCTGGCCATAGTGTCAAGTGCTTTTTCCGCTGTTTTC
TAGAAAACATTGGCATTATCGCCGATAACCAGATAATACCCGGTGCTTTT
GACCGAGTTCTAGGCCATATAGTTACCGCGGAAGCCGTAGAGCGAATGGA
AGCGACGTGTAATATGATTAAGAGCGAGACATCCCATGACGAGTCTTGTG
AATTCGCCTGGCAAATCTCCGAGTGCTACGAAGGAGTAAGATTATCAGAT
GTTAAGAAGGGCCAAAGAACTCGAAATCACAGAGGATAAAAGCTTTCTAG
ACCAT
BS17051.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:45:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp56i-RA | 423 | CG30448-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
Obp56i-RB | 390 | CG30448-PB | 28..390 | 77..439 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:45:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp56i-RA | 569 | CG30448-RA | 29..452 | 17..440 | 2120 | 100 | Plus |
Obp56i-RB | 938 | CG30448-RB | 458..821 | 77..440 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:45:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19868234..19868597 | 77..440 | 1820 | 100 | Plus |
2R | 25286936 | 2R | 19868116..19868178 | 17..79 | 315 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:45:44 has no hits.
BS17051.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:29:16 Download gff for
BS17051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:53:53 Download gff for
BS17051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:24:11 Download gff for
BS17051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 29..449 | 17..437 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:29:16 Download gff for
BS17051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:55:21 Download gff for
BS17051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp56i-RA | 29..449 | 17..437 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:21 Download gff for
BS17051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19868116..19868175 | 17..76 | 100 | -> | Plus |
2R | 19868234..19868594 | 77..437 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:11 Download gff for
BS17051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15755621..15755680 | 17..76 | 100 | -> | Plus |
arm_2R | 15755739..15756099 | 77..437 | 100 | | Plus |
BS17051.pep Sequence
Translation from 16 to 438
> BS17051.pep
MHFFTCCALLLVVVTLPTCFVQAGPIKDQCMAAAGITAQDVANRHETDDP
GHSVKCFFRCFLENIGIIADNQIIPGAFDRVLGHIVTAEAVERMEATCNM
IKSETSHDESCEFAWQISECYEGVRLSDVKKGQRTRNHRG*
BS17051.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:27:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp56i-PA | 140 | CG30448-PA | 1..140 | 1..140 | 753 | 100 | Plus |
Obp56i-PB | 129 | CG30448-PB | 1..129 | 12..140 | 644 | 94.6 | Plus |
Obp56d-PB | 131 | CG11218-PB | 35..124 | 19..121 | 136 | 32 | Plus |
Obp56d-PA | 131 | CG11218-PA | 35..124 | 19..121 | 136 | 32 | Plus |