Clone Sequence Records
BS17058.3prime Sequence
417 bp (417 high quality bases) assembled on 2007-05-15
> BS17058.3prime
ATGGTCTAGAAAGCTTCTACCACATGGCGCGCTGGACGCCGGACAGCTTA
TTGTAGTCGGCGAGGTGGCGCCACACGATTCGACTGAGCCTGTACTTGTG
GACAACTCCGCGCGGACGTGACGTAAGCGCGCAGCGTTCCCTCACCCGGA
CGAGCGATGAGTCCCGAGGAAAAGCAGCGATCTCGGCGTCGGCTACCTCG
CGTAGCTCCGGCGGCAGGATGTCGTTCTTGCGCAGCGAGTTGACTCGCAG
CCGCTCCACGGCGTTCTCCTTGACGCACTTGCGCCGCTTTACGTCGCGAA
TCATCTTCCAATCGGCATACTTTGTGCGCACCTGCTGCAGCCCGCAGCCG
GCTATTTGCACGGACTGGCACACAAAACCCCCGATCCTGGCCAGAGAATT
CATGTCGACTGATAACT
BS17058.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:59:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32531-PA | 387 | mRpS14-RA | 1..387 | 403..17 | 1935 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:48:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS14-RB | 797 | CG32531-RB | 361..749 | 405..17 | 1945 | 100 | Minus |
mRpS14-RA | 476 | CG32531-RA | 40..428 | 405..17 | 1945 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:47:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19479430..19479754 | 17..341 | 1625 | 100 | Plus |
X | 23542271 | X | 19479814..19479878 | 341..405 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:47:57 has no hits.
BS17058.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:59:41 Download gff for
BS17058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32531-PA | 1..387 | 17..403 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:30:56 Download gff for
BS17058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 35..436 | 8..411 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:55:06 Download gff for
BS17058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 35..436 | 8..411 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:55:06 Download gff for
BS17058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19479422..19479753 | 8..340 | 99 | <- | Plus |
X | 19479814..19479883 | 341..411 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:30:56 Download gff for
BS17058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19373455..19373786 | 8..340 | 99 | <- | Plus |
arm_X | 19373847..19373916 | 341..411 | 95 | | Plus |
BS17058.5prime Sequence
417 bp (417 high quality bases) assembled on 2007-05-15
> BS17058.5prime
GAAGTTATCAGTCGACATGAATTCTCTGGCCAGGATCGGGGGTTTTGTGT
GCCAGTCCGTGCAAATAGCCGGCTGCGGGCTGCAGCAGGTGCGCACAAAG
TATGCCGATTGGAAGATGATTCGCGACGTAAAGCGGCGCAAGTGCGTCAA
GGAGAACGCCGTGGAGCGGCTGCGAGTCAACTCGCTGCGCAAGAACGACA
TCCTGCCGCCGGAGCTACGCGAGGTAGCCGACGCCGAGATCGCTGCTTTT
CCTCGGGACTCATCGCTCGTCCGGGTGAGGGAACGCTGCGCGCTTACGTC
ACGTCCGCGCGGAGTTGTCCACAAGTACAGGCTCAGTCGAATCGTGTGGC
GCCACCTCGCCGACTACAATAAGCTGTCCGGCGTCCAGCGCGCCATGTGG
TAGAAGCTTTCTAGACC
BS17058.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:55:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32531-PA | 387 | mRpS14-RA | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:16:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS14-RB | 797 | CG32531-RB | 361..749 | 15..403 | 1945 | 100 | Plus |
mRpS14-RA | 476 | CG32531-RA | 40..428 | 15..403 | 1945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:16:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19479430..19479754 | 403..79 | 1625 | 100 | Minus |
X | 23542271 | X | 19479814..19479878 | 79..15 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:16:18 has no hits.
BS17058.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:55:45 Download gff for
BS17058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32531-PA | 1..387 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:42:03 Download gff for
BS17058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 35..436 | 9..412 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:23:13 Download gff for
BS17058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 35..436 | 9..412 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:23:13 Download gff for
BS17058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19479422..19479753 | 80..412 | 99 | <- | Minus |
X | 19479814..19479883 | 9..79 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:42:03 Download gff for
BS17058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19373455..19373786 | 80..412 | 99 | <- | Minus |
arm_X | 19373847..19373916 | 9..79 | 95 | | Minus |
BS17058.complete Sequence
419 bp assembled on 2007-05-08
GenBank Submission: FJ638238
> BS17058.complete
GAAGTTATCAGTCGACATGAATTCTCTGGCCAGGATCGGGGGTTTTGTGT
GCCAGTCCGTGCAAATAGCCGGCTGCGGGCTGCAGCAGGTGCGCACAAAG
TATGCCGATTGGAAGATGATTCGCGACGTAAAGCGGCGCAAGTGCGTCAA
GGAGAACGCCGTGGAGCGGCTGCGAGTCAACTCGCTGCGCAAGAACGACA
TCCTGCCGCCGGAGCTACGCGAGGTAGCCGACGCCGAGATCGCTGCTTTT
CCTCGGGACTCATCGCTCGTCCGGGTGAGGGAACGCTGCGCGCTTACGTC
ACGTCCGCGCGGAGTTGTCCACAAGTACAGGCTCAGTCGAATCGTGTGGC
GCCACCTCGCCGACTACAATAAGCTGTCCGGCGTCCAGCGCGCCATGTGG
TAGAAGCTTTCTAGACCAT
BS17058.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:01:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS14-RB | 387 | CG32531-PB | 1..387 | 17..403 | 1935 | 100 | Plus |
mRpS14-RA | 387 | CG32531-PA | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:01:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS14-RB | 797 | CG32531-RB | 361..749 | 15..403 | 1945 | 100 | Plus |
mRpS14-RA | 476 | CG32531-RA | 40..428 | 15..403 | 1945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:01:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19479430..19479754 | 403..79 | 1625 | 100 | Minus |
X | 23542271 | X | 19479814..19479878 | 79..15 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:01:51 has no hits.
BS17058.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:38:25 Download gff for
BS17058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 1..387 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:16:27 Download gff for
BS17058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 1..387 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:38:33 Download gff for
BS17058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 42..428 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:38:25 Download gff for
BS17058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 1..387 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:32:20 Download gff for
BS17058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS14-RA | 42..428 | 17..403 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:20 Download gff for
BS17058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19479430..19479753 | 80..403 | 100 | <- | Minus |
X | 19479814..19479876 | 17..79 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:38:33 Download gff for
BS17058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19373463..19373786 | 80..403 | 100 | <- | Minus |
arm_X | 19373847..19373909 | 17..79 | 100 | | Minus |
BS17058.pep Sequence
Translation from 16 to 402
> BS17058.pep
MNSLARIGGFVCQSVQIAGCGLQQVRTKYADWKMIRDVKRRKCVKENAVE
RLRVNSLRKNDILPPELREVADAEIAAFPRDSSLVRVRERCALTSRPRGV
VHKYRLSRIVWRHLADYNKLSGVQRAMW*
BS17058.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:32:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS14-PB | 128 | CG32531-PB | 1..128 | 1..128 | 663 | 100 | Plus |
mRpS14-PA | 128 | CG32531-PA | 1..128 | 1..128 | 663 | 100 | Plus |