Clone Sequence Records
BS17068.3prime Sequence
303 bp (303 high quality bases) assembled on 2007-05-15
> BS17068.3prime
ATGGTCTAGAAAGCTTTTATGCCATGTTCAGTTGCTGGCGCACACTCTCT
ATTTCATCAGGACTCATGACATCCGAGTTGAAGTCTGCTTTGTGAGTTTG
TATCAAATGCCCAGTCGCATCGTTCACACTATCCTGAACACTGTAGTCGT
ATAGGGTTCTCAACATGCCATTCATCACTTTCTGGGATCTTGATTGTGAA
CTAGACTGAACGCTTATAAAGGGGGCAGCATCGCTAAATTGCCAAAGGCA
AATGCAGGAGAAAATGCAGATCACCGCGAAGTAGTTCATGTCGACTGATA
ACT
BS17068.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:58:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9024-PA | 273 | Acp26Ab-RA | 1..273 | 289..17 | 1365 | 100 | Minus |
CG9024-PB | 273 | Acp26Ab-RB | 1..273 | 289..17 | 1365 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:51:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp26Ab-RC | 408 | CG9024-RC | 26..298 | 289..17 | 1365 | 100 | Minus |
Acp26Ab-RB | 504 | CG9024-RB | 26..298 | 289..17 | 1365 | 100 | Minus |
Acp26Ab-RA | 453 | CG9024-RA | 26..298 | 289..17 | 1365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:51:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5892504..5892745 | 17..258 | 1210 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:51:45 has no hits.
BS17068.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:58:09 Download gff for
BS17068.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9024-PB | 1..273 | 17..289 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:51:32 Download gff for
BS17068.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RA | 20..301 | 10..294 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:30:25 Download gff for
BS17068.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RA | 20..301 | 10..294 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:30:25 Download gff for
BS17068.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5892505..5892745 | 18..258 | 100 | <- | Plus |
2L | 5892807..5892843 | 259..294 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:51:32 Download gff for
BS17068.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5892505..5892745 | 18..258 | 100 | <- | Plus |
arm_2L | 5892807..5892843 | 259..294 | 94 | | Plus |
BS17068.5prime Sequence
303 bp (303 high quality bases) assembled on 2007-05-15
> BS17068.5prime
GAAGTTATCAGTCGACATGAACTACTTCGCGGTGATCTGCATTTTCTCCT
GCATTTGCCTTTGGCAATTTAGCGATGCTGCCCCCTTTATAAGCGTTCAG
TCTAGTTCACAATCAAGATCCCAGAAAGTGATGAATGGCATGTTGAGAAC
CCTATACGACTACAGTGTTCAGGATAGTGTGAACGATGCGACTGGGCATT
TGATACAAACTCACAAAGCAGACTTCAACTCGGATGTCATGAGTCCTGAT
GAAATAGAGAGTGTGCGCCAGCAACTGAACATGGCATAAAAGCTTTCTAG
ACC
BS17068.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:54:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9024-PA | 273 | Acp26Ab-RA | 1..273 | 17..289 | 1365 | 100 | Plus |
CG9024-PB | 273 | Acp26Ab-RB | 1..273 | 17..289 | 1365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:13:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp26Ab-RC | 408 | CG9024-RC | 26..298 | 17..289 | 1365 | 100 | Plus |
Acp26Ab-RB | 504 | CG9024-RB | 26..298 | 17..289 | 1365 | 100 | Plus |
Acp26Ab-RA | 453 | CG9024-RA | 26..298 | 17..289 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:13:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5892504..5892745 | 289..48 | 1210 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 21:13:15 has no hits.
BS17068.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:54:29 Download gff for
BS17068.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9024-PB | 1..273 | 17..289 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:30:34 Download gff for
BS17068.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RA | 20..301 | 12..296 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:56:00 Download gff for
BS17068.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RA | 20..301 | 12..296 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:56:00 Download gff for
BS17068.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5892505..5892745 | 48..288 | 100 | <- | Minus |
2L | 5892807..5892843 | 12..47 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:30:34 Download gff for
BS17068.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5892807..5892843 | 12..47 | 94 | | Minus |
arm_2L | 5892505..5892745 | 48..288 | 100 | <- | Minus |
BS17068.complete Sequence
305 bp assembled on 2007-05-08
GenBank Submission: FJ638244
> BS17068.complete
GAAGTTATCAGTCGACATGAACTACTTCGCGGTGATCTGCATTTTCTCCT
GCATTTGCCTTTGGCAATTTAGCGATGCTGCCCCCTTTATAAGCGTTCAG
TCTAGTTCACAATCAAGATCCCAGAAAGTGATGAATGGCATGTTGAGAAC
CCTATACGACTACAGTGTTCAGGATAGTGTGAACGATGCGACTGGGCATT
TGATACAAACTCACAAAGCAGACTTCAACTCGGATGTCATGAGTCCTGAT
GAAATAGAGAGTGTGCGCCAGCAACTGAACATGGCATAAAAGCTTTCTAG
ACCAT
BS17068.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:31:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp26Ab-RC | 273 | CG9024-PC | 1..273 | 17..289 | 1365 | 100 | Plus |
Acp26Ab-RB | 273 | CG9024-PB | 1..273 | 17..289 | 1365 | 100 | Plus |
Acp26Ab-RA | 273 | CG9024-PA | 1..273 | 17..289 | 1365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp26Ab-RC | 408 | CG9024-RC | 26..298 | 17..289 | 1365 | 100 | Plus |
Acp26Ab-RB | 504 | CG9024-RB | 26..298 | 17..289 | 1365 | 100 | Plus |
Acp26Ab-RA | 453 | CG9024-RA | 26..298 | 17..289 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:31:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5892504..5892745 | 289..48 | 1210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:31:46 has no hits.
BS17068.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:38:53 Download gff for
BS17068.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RB | 1..273 | 17..289 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:16:39 Download gff for
BS17068.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RB | 20..301 | 12..296 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:03:08 Download gff for
BS17068.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RA | 26..296 | 17..287 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:38:53 Download gff for
BS17068.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RB | 20..301 | 12..296 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:21:17 Download gff for
BS17068.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp26Ab-RA | 26..296 | 17..287 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:21:17 Download gff for
BS17068.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5892506..5892745 | 48..287 | 100 | <- | Minus |
2L | 5892807..5892837 | 17..47 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:03:08 Download gff for
BS17068.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5892506..5892745 | 48..287 | 100 | <- | Minus |
arm_2L | 5892807..5892837 | 17..47 | 100 | | Minus |
BS17068.pep Sequence
Translation from 16 to 288
> BS17068.pep
MNYFAVICIFSCICLWQFSDAAPFISVQSSSQSRSQKVMNGMLRTLYDYS
VQDSVNDATGHLIQTHKADFNSDVMSPDEIESVRQQLNMA*
BS17068.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:32:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp26Ab-PC | 90 | CG9024-PC | 1..90 | 1..90 | 466 | 100 | Plus |
Acp26Ab-PB | 90 | CG9024-PB | 1..90 | 1..90 | 466 | 100 | Plus |
Acp26Ab-PA | 90 | CG9024-PA | 1..90 | 1..90 | 466 | 100 | Plus |