Clone Sequence Records
BS17148.3prime Sequence
303 bp (303 high quality bases) assembled on 2007-05-15
> BS17148.3prime
ATGGTCTAGAAAGCTTTTAGAAGTTCAAAGATTTGCGAGCCTTGATGAAA
TTCTTATCAGCCTCGTAAGTGTACATGCGATTCAGTTTGTTTTTGCGGCG
CTTTTTGAGTTCGGTTTGGAACTTTCCGTGTCCTGAGCTGCTGGGGGTGG
CTGGTACCAGGGAATACTTCTTGCTGTCCAGGGAGTAGCACTCGCGTTTT
CCGAACTCATGCTGCTCCTTTGGGGTTTCCACGATTTTCAGGCTGTTCAG
GCGCTGCAGCACTTGGTTGGTTTCATTTGTCGACGACATGTCGACTGATA
ACT
BS17148.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:08:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17962-PA | 273 | Z600-RA | 1..273 | 289..17 | 1365 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:09:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Z600-RA | 453 | CG17962-RA | 64..336 | 289..17 | 1365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:09:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15509124..15509396 | 289..17 | 1365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:09:29 has no hits.
BS17148.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:08:14 Download gff for
BS17148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17962-PA | 1..273 | 17..289 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:50:49 Download gff for
BS17148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 17..297 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:10:28 Download gff for
BS17148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 17..297 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:10:28 Download gff for
BS17148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15509116..15509396 | 17..297 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:50:49 Download gff for
BS17148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15502216..15502496 | 17..297 | 98 | | Minus |
BS17148.5prime Sequence
303 bp (303 high quality bases) assembled on 2007-05-15
> BS17148.5prime
GAAGTTATCAGTCGACATGTCGTCGACAAATGAAACCAACCAAGTGCTGC
AGCGCCTGAACAGCCTGAAAATCGTGGAAACCCCAAAGGAGCAGCATGAG
TTCGGAAAACGCGAGTGCTACTCCCTGGACAGCAAGAAGTATTCCCTGGT
ACCAGCCACCCCCAGCAGCTCAGGACACGGAAAGTTCCAAACCGAACTCA
AAAAGCGCCGCAAAAACAAACTGAATCGCATGTACACTTACGAGGCTGAT
AAGAATTTCATCAAGGCTCGCAAATCTTTGAACTTCTAAAAGCTTTCTAG
ACC
BS17148.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:03:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17962-PA | 273 | Z600-RA | 1..273 | 17..289 | 1365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:59:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Z600-RA | 453 | CG17962-RA | 64..336 | 17..289 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:59:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15509124..15509396 | 17..289 | 1365 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 20:59:47 has no hits.
BS17148.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:04:01 Download gff for
BS17148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17962-PA | 1..273 | 17..289 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:37:47 Download gff for
BS17148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 9..289 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:37:57 Download gff for
BS17148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 9..289 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:37:57 Download gff for
BS17148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15509129..15509396 | 22..289 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:37:47 Download gff for
BS17148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15502229..15502496 | 22..289 | 100 | | Plus |
BS17148.complete Sequence
305 bp assembled on 2007-05-08
GenBank Submission: FJ638255
> BS17148.complete
GAAGTTATCAGTCGACATGTCGTCGACAAATGAAACCAACCAAGTGCTGC
AGCGCCTGAACAGCCTGAAAATCGTGGAAACCCCAAAGGAGCAGCATGAG
TTCGGAAAACGCGAGTGCTACTCCCTGGACAGCAAGAAGTATTCCCTGGT
ACCAGCCACCCCCAGCAGCTCAGGACACGGAAAGTTCCAAACCGAACTCA
AAAAGCGCCGCAAAAACAAACTGAATCGCATGTACACTTACGAGGCTGAT
AAGAATTTCATCAAGGCTCGCAAATCTTTGAACTTCTAAAAGCTTTCTAG
ACCAT
BS17148.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:17:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Z600-RA | 273 | CG17962-PA | 1..273 | 17..289 | 1365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Z600-RA | 453 | CG17962-RA | 64..336 | 17..289 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15509124..15509396 | 17..289 | 1365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:17:51 has no hits.
BS17148.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:28:45 Download gff for
BS17148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 1..273 | 17..289 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:00:42 Download gff for
BS17148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 9..289 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:45:24 Download gff for
BS17148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 64..334 | 17..287 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:28:46 Download gff for
BS17148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 9..289 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:50:13 Download gff for
BS17148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 64..334 | 17..287 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:50:13 Download gff for
BS17148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15509124..15509394 | 17..287 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:45:24 Download gff for
BS17148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15502224..15502494 | 17..287 | 100 | | Plus |
BS17148.pep Sequence
Translation from 16 to 288
> BS17148.pep
MSSTNETNQVLQRLNSLKIVETPKEQHEFGKRECYSLDSKKYSLVPATPS
SSGHGKFQTELKKRRKNKLNRMYTYEADKNFIKARKSLNF*
BS17148.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Z600-PA | 90 | CG17962-PA | 1..90 | 1..90 | 464 | 100 | Plus |
