Clone Sequence Records
BS17150.3prime Sequence
540 bp (540 high quality bases) assembled on 2007-05-15
> BS17150.3prime
ATGGTCTAGAAAGCTTTTCTAAATCGATGGTATCGTAATCAAACAGATCC
GCCTGCTGTTCAGCTATTAGTCCAGCGGTTTCCTCTTGTATTTGTTCATA
TGAATCGAACTTGATGACTGAATGTCCGGATTTGAATGCACATATTACCA
ATTTATAGACGTAGGCACAGGTTTCTTGGGGAGCCTTCTCCATGCACTTT
GATATGGATACCGCTGTCTCACTGGTTGCTTTCATTGATTTCAGATCGAC
TTCACCCCGAGCATTTAGCCATTTGGTTGGCTCTCTTTCCAGTTGACACT
TAATGTTGCACTTGTGCTTCAGTTCGACATTTTCCTTGAGGACATTATCC
AAATTGTCGGTATCGTCAAACTTCTCATACTCTTCAATGGTAATATTATT
GATTCTCAGACAATCAATAAAATCGTCATAGGTTCCTTCGAAAAAGTCAA
AGGGTTGGCTTTCCTTAGCTTGGCTAAGCGAAACAACGATAAGAAGCAAA
AAAATGGCAAGTCTAGTGTTGAACATGTCGACTGATAACT
BS17150.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:06:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30141-PA | 510 | Obp57a-RA | 1..507 | 526..20 | 2535 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:07:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-RA | 558 | CG30141-RA | 20..531 | 526..15 | 2545 | 99.8 | Minus |
Obp57b-RB | 823 | CG30142-RB | 142..407 | 400..135 | 250 | 74.3 | Minus |
Obp57b-RA | 477 | CG30142-RA | 142..407 | 400..135 | 250 | 74.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:07:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20505281..20505731 | 465..15 | 2240 | 99.8 | Minus |
2R | 25286936 | 2R | 20505169..20505232 | 526..463 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:07:11 has no hits.
BS17150.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:06:12 Download gff for
BS17150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30141-PA | 1..510 | 17..526 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:52:57 Download gff for
BS17150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 12..531 | 15..533 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:05:09 Download gff for
BS17150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 12..531 | 15..533 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:05:09 Download gff for
BS17150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20505161..20505231 | 464..533 | 95 | -> | Minus |
2R | 20505283..20505731 | 15..463 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:52:57 Download gff for
BS17150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16392666..16392736 | 464..533 | 95 | -> | Minus |
arm_2R | 16392788..16393236 | 15..463 | 99 | | Minus |
BS17150.5prime Sequence
540 bp (540 high quality bases) assembled on 2007-05-15
> BS17150.5prime
GAAGTTATCAGTCGACATGTTCAACACTAGACTTGCCATTTTTTTGCTTC
TTATCGTTGTTTCGCTTAGCCAAGCTAAGGAAAGCCAACCCTTTGACTTT
TTCGAAGGAACCTATGACGATTTTATTGATTGTCTGAGAATCAATAATAT
TACCATTGAAGAGTATGAGAAGTTTGACGATACCGACAATTTGGATAATG
TCCTCAAGGAAAATGTCGAACTGAAGCACAAGTGCAACATTAAGTGTCAA
CTGGAAAGAGAGCCAACCAAATGGCTAAATGCTCGGGGTGAAGTCGATCT
GAAATCAATGAAAGCAACCAGTGAGACAGCGGTATCCATATCAAAGTGCA
TGGAGAAGGCTCCCCAAGAAACCTGTGCCTACGTCTATAAATTGGTAATA
TGTGCATTCAAATCCGGACATTCAGTCATCAAGTTCGATTCATATGAACA
AATACAAGAGGAAACCGCTGGACTAATAGCTGAACAGCAGGCGGATCTGT
TTGATTACGATACCATCGATTTATAAAAGCTTTCTAGACC
BS17150.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:01:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30141-PA | 510 | Obp57a-RA | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:54:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-RA | 558 | CG30141-RA | 20..531 | 17..528 | 2560 | 100 | Plus |
Obp57b-RB | 823 | CG30142-RB | 142..407 | 143..408 | 250 | 74.3 | Plus |
Obp57b-RA | 477 | CG30142-RA | 142..407 | 143..408 | 250 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:54:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20505281..20505731 | 78..528 | 2255 | 100 | Plus |
2R | 25286936 | 2R | 20505169..20505232 | 17..80 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 15:54:34 has no hits.
BS17150.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:01:55 Download gff for
BS17150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30141-PA | 1..510 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:19:36 Download gff for
BS17150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 12..531 | 10..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:26:25 Download gff for
BS17150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 12..531 | 10..528 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:26:25 Download gff for
BS17150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20505161..20505231 | 10..79 | 95 | -> | Plus |
2R | 20505283..20505731 | 80..528 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:19:36 Download gff for
BS17150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16392666..16392736 | 10..79 | 95 | -> | Plus |
arm_2R | 16392788..16393236 | 80..528 | 100 | | Plus |
BS17150.complete Sequence
542 bp assembled on 2007-05-08
GenBank Submission: FJ638257
> BS17150.complete
GAAGTTATCAGTCGACATGTTCAACACTAGACTTGCCATTTTTTTGCTTC
TTATCGTTGTTTCGCTTAGCCAAGCTAAGGAAAGCCAACCCTTTGACTTT
TTCGAAGGAACCTATGACGATTTTATTGATTGTCTGAGAATCAATAATAT
TACCATTGAAGAGTATGAGAAGTTTGACGATACCGACAATTTGGATAATG
TCCTCAAGGAAAATGTCGAACTGAAGCACAAGTGCAACATTAAGTGTCAA
CTGGAAAGAGAGCCAACCAAATGGCTAAATGCTCGGGGTGAAGTCGATCT
GAAATCAATGAAAGCAACCAGTGAGACAGCGGTATCCATATCAAAGTGCA
TGGAGAAGGCTCCCCAAGAAACCTGTGCCTACGTCTATAAATTGGTAATA
TGTGCATTCAAATCCGGACATTCAGTCATCAAGTTCGATTCATATGAACA
AATACAAGAGGAAACCGCTGGACTAATAGCTGAACAGCAGGCGGATCTGT
TTGATTACGATACCATCGATTTATAAAAGCTTTCTAGACCAT
BS17150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:41:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-RA | 510 | CG30141-PA | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:41:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-RA | 558 | CG30141-RA | 20..531 | 17..528 | 2560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:41:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20505281..20505731 | 78..528 | 2255 | 100 | Plus |
2R | 25286936 | 2R | 20505169..20505232 | 17..80 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:41:44 has no hits.
BS17150.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:28:47 Download gff for
BS17150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 1..510 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:00:44 Download gff for
BS17150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 1..514 | 16..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:44 Download gff for
BS17150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 25..527 | 22..524 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:28:47 Download gff for
BS17150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 1..514 | 16..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:08 Download gff for
BS17150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 25..527 | 22..524 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:08 Download gff for
BS17150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20505174..20505231 | 22..79 | 100 | -> | Plus |
2R | 20505283..20505727 | 80..524 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:44 Download gff for
BS17150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16392679..16392736 | 22..79 | 100 | -> | Plus |
arm_2R | 16392788..16393232 | 80..524 | 100 | | Plus |
BS17150.pep Sequence
Translation from 16 to 525
> BS17150.pep
MFNTRLAIFLLLIVVSLSQAKESQPFDFFEGTYDDFIDCLRINNITIEEY
EKFDDTDNLDNVLKENVELKHKCNIKCQLEREPTKWLNARGEVDLKSMKA
TSETAVSISKCMEKAPQETCAYVYKLVICAFKSGHSVIKFDSYEQIQEET
AGLIAEQQADLFDYDTIDL*
BS17150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-PA | 169 | CG30141-PA | 1..169 | 1..169 | 876 | 100 | Plus |
Obp57b-PB | 141 | CG30142-PB | 1..138 | 1..138 | 408 | 55.1 | Plus |
Obp57b-PA | 141 | CG30142-PA | 1..138 | 1..138 | 408 | 55.1 | Plus |