Clone BS17150 Report

Search the DGRC for BS17150

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:171
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptObp57a-RA
Protein status:BS17150.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS17150.3prime Sequence

540 bp (540 high quality bases) assembled on 2007-05-15

> BS17150.3prime
ATGGTCTAGAAAGCTTTTCTAAATCGATGGTATCGTAATCAAACAGATCC
GCCTGCTGTTCAGCTATTAGTCCAGCGGTTTCCTCTTGTATTTGTTCATA
TGAATCGAACTTGATGACTGAATGTCCGGATTTGAATGCACATATTACCA
ATTTATAGACGTAGGCACAGGTTTCTTGGGGAGCCTTCTCCATGCACTTT
GATATGGATACCGCTGTCTCACTGGTTGCTTTCATTGATTTCAGATCGAC
TTCACCCCGAGCATTTAGCCATTTGGTTGGCTCTCTTTCCAGTTGACACT
TAATGTTGCACTTGTGCTTCAGTTCGACATTTTCCTTGAGGACATTATCC
AAATTGTCGGTATCGTCAAACTTCTCATACTCTTCAATGGTAATATTATT
GATTCTCAGACAATCAATAAAATCGTCATAGGTTCCTTCGAAAAAGTCAA
AGGGTTGGCTTTCCTTAGCTTGGCTAAGCGAAACAACGATAAGAAGCAAA
AAAATGGCAAGTCTAGTGTTGAACATGTCGACTGATAACT

BS17150.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG30141-PA 510 Obp57a-RA 1..507 526..20 2535 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:07:12
Subject Length Description Subject Range Query Range Score Percent Strand
Obp57a-RA 558 CG30141-RA 20..531 526..15 2545 99.8 Minus
Obp57b-RB 823 CG30142-RB 142..407 400..135 250 74.3 Minus
Obp57b-RA 477 CG30142-RA 142..407 400..135 250 74.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:07:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20505281..20505731 465..15 2240 99.8 Minus
2R 25286936 2R 20505169..20505232 526..463 320 100 Minus
Blast to na_te.dros performed on 2015-02-12 10:07:11 has no hits.

BS17150.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:06:12 Download gff for BS17150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30141-PA 1..510 17..526 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:52:57 Download gff for BS17150.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 12..531 15..533 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:05:09 Download gff for BS17150.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 12..531 15..533 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:05:09 Download gff for BS17150.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 20505161..20505231 464..533 95 -> Minus
2R 20505283..20505731 15..463 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:52:57 Download gff for BS17150.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16392666..16392736 464..533 95 -> Minus
arm_2R 16392788..16393236 15..463 99   Minus

BS17150.5prime Sequence

540 bp (540 high quality bases) assembled on 2007-05-15

> BS17150.5prime
GAAGTTATCAGTCGACATGTTCAACACTAGACTTGCCATTTTTTTGCTTC
TTATCGTTGTTTCGCTTAGCCAAGCTAAGGAAAGCCAACCCTTTGACTTT
TTCGAAGGAACCTATGACGATTTTATTGATTGTCTGAGAATCAATAATAT
TACCATTGAAGAGTATGAGAAGTTTGACGATACCGACAATTTGGATAATG
TCCTCAAGGAAAATGTCGAACTGAAGCACAAGTGCAACATTAAGTGTCAA
CTGGAAAGAGAGCCAACCAAATGGCTAAATGCTCGGGGTGAAGTCGATCT
GAAATCAATGAAAGCAACCAGTGAGACAGCGGTATCCATATCAAAGTGCA
TGGAGAAGGCTCCCCAAGAAACCTGTGCCTACGTCTATAAATTGGTAATA
TGTGCATTCAAATCCGGACATTCAGTCATCAAGTTCGATTCATATGAACA
AATACAAGAGGAAACCGCTGGACTAATAGCTGAACAGCAGGCGGATCTGT
TTGATTACGATACCATCGATTTATAAAAGCTTTCTAGACC

BS17150.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG30141-PA 510 Obp57a-RA 1..510 17..526 2550 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:54:36
Subject Length Description Subject Range Query Range Score Percent Strand
Obp57a-RA 558 CG30141-RA 20..531 17..528 2560 100 Plus
Obp57b-RB 823 CG30142-RB 142..407 143..408 250 74.3 Plus
Obp57b-RA 477 CG30142-RA 142..407 143..408 250 74.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:54:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20505281..20505731 78..528 2255 100 Plus
2R 25286936 2R 20505169..20505232 17..80 320 100 Plus
Blast to na_te.dros performed on 2015-02-12 15:54:34 has no hits.

BS17150.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:01:55 Download gff for BS17150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30141-PA 1..510 17..526 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:19:36 Download gff for BS17150.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 12..531 10..528 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:26:25 Download gff for BS17150.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 12..531 10..528 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:26:25 Download gff for BS17150.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 20505161..20505231 10..79 95 -> Plus
2R 20505283..20505731 80..528 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:19:36 Download gff for BS17150.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16392666..16392736 10..79 95 -> Plus
arm_2R 16392788..16393236 80..528 100   Plus

BS17150.complete Sequence

542 bp assembled on 2007-05-08

GenBank Submission: FJ638257

> BS17150.complete
GAAGTTATCAGTCGACATGTTCAACACTAGACTTGCCATTTTTTTGCTTC
TTATCGTTGTTTCGCTTAGCCAAGCTAAGGAAAGCCAACCCTTTGACTTT
TTCGAAGGAACCTATGACGATTTTATTGATTGTCTGAGAATCAATAATAT
TACCATTGAAGAGTATGAGAAGTTTGACGATACCGACAATTTGGATAATG
TCCTCAAGGAAAATGTCGAACTGAAGCACAAGTGCAACATTAAGTGTCAA
CTGGAAAGAGAGCCAACCAAATGGCTAAATGCTCGGGGTGAAGTCGATCT
GAAATCAATGAAAGCAACCAGTGAGACAGCGGTATCCATATCAAAGTGCA
TGGAGAAGGCTCCCCAAGAAACCTGTGCCTACGTCTATAAATTGGTAATA
TGTGCATTCAAATCCGGACATTCAGTCATCAAGTTCGATTCATATGAACA
AATACAAGAGGAAACCGCTGGACTAATAGCTGAACAGCAGGCGGATCTGT
TTGATTACGATACCATCGATTTATAAAAGCTTTCTAGACCAT

BS17150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
Obp57a-RA 510 CG30141-PA 1..510 17..526 2550 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Obp57a-RA 558 CG30141-RA 20..531 17..528 2560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20505281..20505731 78..528 2255 100 Plus
2R 25286936 2R 20505169..20505232 17..80 320 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:41:44 has no hits.

BS17150.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:28:47 Download gff for BS17150.complete
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 1..510 17..526 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:00:44 Download gff for BS17150.complete
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 1..514 16..528 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:44 Download gff for BS17150.complete
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 25..527 22..524 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:28:47 Download gff for BS17150.complete
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 1..514 16..528 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:08 Download gff for BS17150.complete
Subject Subject Range Query Range Percent Splice Strand
Obp57a-RA 25..527 22..524 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:08 Download gff for BS17150.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20505174..20505231 22..79 100 -> Plus
2R 20505283..20505727 80..524 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:44 Download gff for BS17150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16392679..16392736 22..79 100 -> Plus
arm_2R 16392788..16393232 80..524 100   Plus

BS17150.pep Sequence

Translation from 16 to 525

> BS17150.pep
MFNTRLAIFLLLIVVSLSQAKESQPFDFFEGTYDDFIDCLRINNITIEEY
EKFDDTDNLDNVLKENVELKHKCNIKCQLEREPTKWLNARGEVDLKSMKA
TSETAVSISKCMEKAPQETCAYVYKLVICAFKSGHSVIKFDSYEQIQEET
AGLIAEQQADLFDYDTIDL*

BS17150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
Obp57a-PA 169 CG30141-PA 1..169 1..169 876 100 Plus
Obp57b-PB 141 CG30142-PB 1..138 1..138 408 55.1 Plus
Obp57b-PA 141 CG30142-PA 1..138 1..138 408 55.1 Plus