Clone Sequence Records
BS17159.3prime Sequence
630 bp (630 high quality bases) assembled on 2007-05-15
> BS17159.3prime
ATGGTCTAGAAAGCTTTCACTTGGCTTCTGGCTCTGAAGCAGAAGCTGCC
GGACCGGCCTCCTTATGACCGTTTCCATTCTGGAAGAGATCCGATGGACC
CACATGCTTAATGGGTATGATGCGCTCCTTGAGCTCCTCCTTGGAAACTA
ATGGTGGAACCGTGATATTGAGAACTCCATCCTCCGACAAAGTGGAAACA
ATGGCATCCGAATCGAACTCCTTGGGCAGCGGATAGCGGCGAACAAAATG
CCGGGATACATGTCCATGATCGTCCTCGCGCTCCTCGTGTTTTCCCTCGA
CCACAATGCACTCGTTGACCAGTTTGACGGTCAGTTCACCTGGCTGAAAG
AGTCCCACATCCAGATGGACCTCGAAATTGCCCTGCTTATTTGAGGCTCC
ACCGCGGCTCAATGCAGCCAGCTCTCCGTTCCTTTTATTGGCCACCAGGT
GATGGGCATGTGCACCCATCCGGGCAATCAGACCCAGGGTGTGCAAATCA
AGATCATGATGCTGCCGCGAATGCAATCGCCTGTACATGCGATTCGGGAA
CATATCGTGGCCGTAGTACATGGAGTCCGGGGAGTCCAAATTCAAGACAA
AGGGAATATCTGGCATGTCGACTGATAACT
BS17159.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4190-PA | 600 | Hsp67Bc-RA | 1..600 | 616..17 | 3000 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:09:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Bc-RA | 987 | CG4190-RA | 181..781 | 616..16 | 3005 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:09:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9371717..9372317 | 16..616 | 3005 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:09:01 has no hits.
BS17159.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:08:28 Download gff for
BS17159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4190-PA | 1..600 | 17..616 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:53:30 Download gff for
BS17159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 175..790 | 8..623 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:08:24 Download gff for
BS17159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 175..790 | 8..623 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:08:24 Download gff for
BS17159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9371708..9372323 | 8..623 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:53:30 Download gff for
BS17159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9364808..9365423 | 8..623 | 98 | | Plus |
BS17159.5prime Sequence
630 bp (630 high quality bases) assembled on 2007-05-15
> BS17159.5prime
GAAGTTATCAGTCGACATGCCAGATATTCCCTTTGTCTTGAATTTGGACT
CCCCGGACTCCATGTACTACGGCCACGATATGTTCCCGAATCGCATGTAC
AGGCGATTGCATTCGCGGCAGCATCATGATCTTGATTTGCACACCCTGGG
TCTGATTGCCCGGATGGGTGCACATGCCCATCACCTGGTGGCCAATAAAA
GGAACGGAGAGCTGGCTGCATTGAGCCGCGGTGGAGCCTCAAATAAGCAG
GGCAATTTCGAGGTCCATCTGGATGTGGGACTCTTTCAGCCAGGTGAACT
GACCGTCAAACTGGTCAACGAGTGCATTGTGGTCGAGGGAAAACACGAGG
AGCGCGAGGACGATCATGGACATGTATCCCGGCATTTTGTTCGCCGCTAT
CCGCTGCCCAAGGAGTTCGATTCGGATGCCATTGTTTCCACTTTGTCGGA
GGATGGAGTTCTCAATATCACGGTTCCACCATTAGTTTCCAAGGAGGAGC
TCAAGGAGCGCATCATACCCATTAAGCATGTGGGTCCATCGGATCTCTTC
CAGAATGGAAACGGTCATAAGGAGGCCGGTCCGGCAGCTTCTGCTTCAGA
GCCAGAAGCCAAGTGAAAGCTTTCTAGACC
BS17159.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:04:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4190-PA | 600 | Hsp67Bc-RA | 1..600 | 17..616 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Bc-RA | 987 | CG4190-RA | 181..781 | 17..617 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:36:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9371717..9372317 | 617..17 | 3005 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:36:07 has no hits.
BS17159.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:04:14 Download gff for
BS17159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4190-PA | 1..600 | 17..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:50:56 Download gff for
BS17159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 175..790 | 10..625 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:39:34 Download gff for
BS17159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 175..790 | 10..625 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:39:34 Download gff for
BS17159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9371708..9372323 | 10..625 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:50:56 Download gff for
BS17159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9364808..9365423 | 10..625 | 98 | | Minus |
BS17159.complete Sequence
632 bp assembled on 2007-05-08
GenBank Submission: FJ638260
> BS17159.complete
GAAGTTATCAGTCGACATGCCAGATATTCCCTTTGTCTTGAATTTGGACT
CCCCGGACTCCATGTACTACGGCCACGATATGTTCCCGAATCGCATGTAC
AGGCGATTGCATTCGCGGCAGCATCATGATCTTGATTTGCACACCCTGGG
TCTGATTGCCCGGATGGGTGCACATGCCCATCACCTGGTGGCCAATAAAA
GGAACGGAGAGCTGGCTGCATTGAGCCGCGGTGGAGCCTCAAATAAGCAG
GGCAATTTCGAGGTCCATCTGGATGTGGGACTCTTTCAGCCAGGTGAACT
GACCGTCAAACTGGTCAACGAGTGCATTGTGGTCGAGGGAAAACACGAGG
AGCGCGAGGACGATCATGGACATGTATCCCGGCATTTTGTTCGCCGCTAT
CCGCTGCCCAAGGAGTTCGATTCGGATGCCATTGTTTCCACTTTGTCGGA
GGATGGAGTTCTCAATATCACGGTTCCACCATTAGTTTCCAAGGAGGAGC
TCAAGGAGCGCATCATACCCATTAAGCATGTGGGTCCATCGGATCTCTTC
CAGAATGGAAACGGTCATAAGGAGGCCGGTCCGGCAGCTTCTGCTTCAGA
GCCAGAAGCCAAGTGAAAGCTTTCTAGACCAT
BS17159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:39:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Bc-RA | 600 | CG4190-PA | 1..600 | 17..616 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:39:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Bc-RA | 987 | CG4190-RA | 181..781 | 17..617 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:39:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9371717..9372317 | 617..17 | 3005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:39:39 has no hits.
BS17159.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:28:52 Download gff for
BS17159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 1..600 | 17..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:00:50 Download gff for
BS17159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 1..600 | 17..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:10 Download gff for
BS17159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 181..779 | 17..615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:28:52 Download gff for
BS17159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 1..600 | 17..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:41 Download gff for
BS17159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bc-RA | 181..779 | 17..615 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:41 Download gff for
BS17159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9371719..9372317 | 17..615 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:10 Download gff for
BS17159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9364819..9365417 | 17..615 | 100 | | Minus |
BS17159.pep Sequence
Translation from 16 to 615
> BS17159.pep
MPDIPFVLNLDSPDSMYYGHDMFPNRMYRRLHSRQHHDLDLHTLGLIARM
GAHAHHLVANKRNGELAALSRGGASNKQGNFEVHLDVGLFQPGELTVKLV
NECIVVEGKHEEREDDHGHVSRHFVRRYPLPKEFDSDAIVSTLSEDGVLN
ITVPPLVSKEELKERIIPIKHVGPSDLFQNGNGHKEAGPAASASEPEAK*
BS17159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Bc-PA | 199 | CG4190-PA | 1..199 | 1..199 | 1055 | 100 | Plus |
| Hsp27-PB | 213 | CG4466-PB | 34..204 | 18..188 | 308 | 42.3 | Plus |
| Hsp27-PA | 213 | CG4466-PA | 34..204 | 18..188 | 308 | 42.3 | Plus |
| Hsp26-PB | 208 | CG4183-PB | 89..208 | 81..199 | 288 | 47.5 | Plus |
| Hsp26-PA | 208 | CG4183-PA | 89..208 | 81..199 | 288 | 47.5 | Plus |
