Clone Sequence Records
BS17164.3prime Sequence
804 bp (759 high quality bases) assembled on 2007-05-15
> BS17164.3prime
ATGGTCTAGAAAGCTTTCACAGTTCCTCCTTTTCCGGCGCTGTCTTGGTG
ACCTTGTGAACCCTGAAGACTTCCAGGATGTTCAGTTTCCTCAGCAGCTC
CTCCTTCTTGGCCTCGGTGACCTTGCCGGCCTTGAGGCGCAGGAGTCGCT
TGGTCTCCTCCTCCAGGAAATCGTAGCCCACCTCGTGGATCTTCCGCATG
TAGATCAGATAGGCCCTGGCGTTCTGCTGCTGCTCGGGATCGGTCAGCTG
CTCCTGCTTGGCCTGCAGCTTTTCGATAAGCTTCAGTTGCTCTGCATCGG
GGATATTGGCATAGTTCTTGAGCACTTCGTTGAACTCTTTGATGCAGCCA
TCACGACCGATGTACAGAGGTGTGTTGGCACTGACAAAAGCCTTCAGATT
GTCCAGCGTTACGTCGACGTGGCTAGGAAGCTGGACGTACTCATCAGCGT
TGCCCTTGAACAGGAAGATACTCGGGAAGTTCTTGTCGTCGACTTTGTAA
CGGTCGCCCAGGGCCTTGTTCTCCAGTTCTCCATAGTCCTTGACACCCAC
GGTGGCTATTAGCAGATCTTTAGTTGCCTTGTGGGCAGATTTGGAGAAGG
CGGTAAAGGCCTCATGCTTTTCCCCATACGGATATGCGATATCAAATTTC
ACTACGGAGTAGGGAAATCGTTCCACCGTCTTCTCGAAACTCAGCTCATC
CAGATCCACGCAGCCCGTGCAGGTGACGGCCCAGGTGGTGGGTATCGAGT
GGATAGCGACCAGGAGCAGAGTCACCAAAATATGCATCATGTCGACTGAT
AACT
BS17164.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:08:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7225-PA | 774 | wbl-RA | 1..774 | 790..17 | 3870 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:21:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-RB | 1319 | CG7225-RB | 431..1205 | 790..16 | 3875 | 100 | Minus |
wbl-RA | 953 | CG7225-RA | 65..839 | 790..16 | 3875 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:21:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19250303..19250803 | 516..16 | 2505 | 100 | Minus |
2R | 25286936 | 2R | 19249825..19250101 | 790..514 | 1385 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 04:21:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2867 | 322..210 | 151 | 65.8 | Minus |
BS17164.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:08:41 Download gff for
BS17164.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7225-PA | 1..774 | 17..790 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:30:12 Download gff for
BS17164.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 58..848 | 5..798 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:03:27 Download gff for
BS17164.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 58..848 | 5..798 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:03:27 Download gff for
BS17164.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19249818..19250100 | 515..798 | 98 | -> | Minus |
2R | 19250305..19250812 | 5..514 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:30:12 Download gff for
BS17164.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15137323..15137605 | 515..798 | 98 | -> | Minus |
arm_2R | 15137810..15138317 | 5..514 | 99 | | Minus |
BS17164.5prime Sequence
804 bp (770 high quality bases) assembled on 2007-05-15
> BS17164.5prime
GAAGTTATCAGTCGACATGATGCATATTTTGGTGACTCTGCTCCTGGTCG
CTATCCACTCGATACCCACCACCTGGGCCGTCACCTGCACGGGCTGCGTG
GATCTGGATGAGCTGAGTTTCGAGAAGACGGTGGAACGATTTCCCTACTC
CGTAGTGAAATTTGATATCGCATATCCGTATGGGGAAAAGCATGAGGCCT
TTACCGCCTTCTCCAAATCTGCCCACAAGGCAACTAAAGATCTGCTAATA
GCCACCGTGGGTGTCAAGGACTATGGAGAACTGGAGAACAAGGCCCTGGG
CGACCGTTACAAAGTCGACGACAAGAACTTCCCGAGTATCTTCCTGTTCA
AGGGCAACGCTGATGAGTACGTCCAGCTTCCTAGCCACGTCGACGTAACG
CTGGACAATCTGAAGGCTTTTGTCAGTGCCAACACACCTCTGTACATCGG
TCGTGATGGCTGCATCAAAGAGTTCAACGAAGTGCTCAAGAACTATGCCA
ATATCCCCGATGCAGAGCAACTGAAGCTTATCGAAAAGCTGCAGGCCAAG
CAGGAGCAGCTGACCGATCCCGAGCAGCAGCAGAACGCCAGGGCCTATCT
GATCTACATGCGGAAGATCCACGAGGTGGGCTACGATTTCCTGGAGGAGG
AGACCAAGCGACTCCTGCGCCTCAAGGCCGGCAAGGTCACCGAGGCCAAG
AAGGAGGAGCTGCTGAGGAAACTGAACATCCTGGAAGTCTTCAGGGTTCA
CAAGGTCACCAAGACAGCGCCGGAAAAGGAGGAACTGTGAAAGCTTTCTA
GACC
BS17164.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:04:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7225-PA | 774 | wbl-RA | 1..774 | 17..790 | 3870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:17:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-RB | 1319 | CG7225-RB | 431..1205 | 17..791 | 3875 | 100 | Plus |
wbl-RA | 953 | CG7225-RA | 65..839 | 17..791 | 3875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:17:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19250303..19250803 | 291..791 | 2505 | 100 | Plus |
2R | 25286936 | 2R | 19249825..19250101 | 17..293 | 1385 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 15:17:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2867 | 485..597 | 151 | 65.8 | Plus |
BS17164.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:04:28 Download gff for
BS17164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7225-PA | 1..774 | 17..790 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:51:22 Download gff for
BS17164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 58..848 | 9..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:08:44 Download gff for
BS17164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 58..848 | 9..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:08:44 Download gff for
BS17164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19249818..19250100 | 9..292 | 98 | -> | Plus |
2R | 19250305..19250812 | 293..802 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:51:22 Download gff for
BS17164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15137323..15137605 | 9..292 | 98 | -> | Plus |
arm_2R | 15137810..15138317 | 293..802 | 99 | | Plus |
BS17164.complete Sequence
806 bp assembled on 2007-05-08
GenBank Submission: FJ638261
> BS17164.complete
GAAGTTATCAGTCGACATGATGCATATTTTGGTGACTCTGCTCCTGGTCG
CTATCCACTCGATACCCACCACCTGGGCCGTCACCTGCACGGGCTGCGTG
GATCTGGATGAGCTGAGTTTCGAGAAGACGGTGGAACGATTTCCCTACTC
CGTAGTGAAATTTGATATCGCATATCCGTATGGGGAAAAGCATGAGGCCT
TTACCGCCTTCTCCAAATCTGCCCACAAGGCAACTAAAGATCTGCTAATA
GCCACCGTGGGTGTCAAGGACTATGGAGAACTGGAGAACAAGGCCCTGGG
CGACCGTTACAAAGTCGACGACAAGAACTTCCCGAGTATCTTCCTGTTCA
AGGGCAACGCTGATGAGTACGTCCAGCTTCCTAGCCACGTCGACGTAACG
CTGGACAATCTGAAGGCTTTTGTCAGTGCCAACACACCTCTGTACATCGG
TCGTGATGGCTGCATCAAAGAGTTCAACGAAGTGCTCAAGAACTATGCCA
ATATCCCCGATGCAGAGCAACTGAAGCTTATCGAAAAGCTGCAGGCCAAG
CAGGAGCAGCTGACCGATCCCGAGCAGCAGCAGAACGCCAGGGCCTATCT
GATCTACATGCGGAAGATCCACGAGGTGGGCTACGATTTCCTGGAGGAGG
AGACCAAGCGACTCCTGCGCCTCAAGGCCGGCAAGGTCACCGAGGCCAAG
AAGGAGGAGCTGCTGAGGAAACTGAACATCCTGGAAGTCTTCAGGGTTCA
CAAGGTCACCAAGACAGCGCCGGAAAAGGAGGAACTGTGAAAGCTTTCTA
GACCAT
BS17164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-RB | 774 | CG7225-PB | 1..774 | 17..790 | 3870 | 100 | Plus |
wbl-RA | 774 | CG7225-PA | 1..774 | 17..790 | 3870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:01:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-RB | 1319 | CG7225-RB | 431..1205 | 17..791 | 3875 | 100 | Plus |
wbl-RA | 953 | CG7225-RA | 65..839 | 17..791 | 3875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:01:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19250303..19250803 | 291..791 | 2505 | 100 | Plus |
2R | 25286936 | 2R | 19249825..19250101 | 17..293 | 1385 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 08:01:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2867 | 485..597 | 151 | 65.8 | Plus |
BS17164.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:28:53 Download gff for
BS17164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 1..774 | 17..790 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:00:51 Download gff for
BS17164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 58..848 | 9..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:07:18 Download gff for
BS17164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 65..837 | 17..789 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:28:54 Download gff for
BS17164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 58..848 | 9..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:09:25 Download gff for
BS17164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 65..837 | 17..789 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:09:25 Download gff for
BS17164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19249825..19250100 | 17..292 | 100 | -> | Plus |
2R | 19250305..19250801 | 293..789 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:07:18 Download gff for
BS17164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15137330..15137605 | 17..292 | 100 | -> | Plus |
arm_2R | 15137810..15138306 | 293..789 | 100 | | Plus |
BS17164.pep Sequence
Translation from 16 to 789
> BS17164.pep
MMHILVTLLLVAIHSIPTTWAVTCTGCVDLDELSFEKTVERFPYSVVKFD
IAYPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV
DDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCI
KEFNEVLKNYANIPDAEQLKLIEKLQAKQEQLTDPEQQQNARAYLIYMRK
IHEVGYDFLEEETKRLLRLKAGKVTEAKKEELLRKLNILEVFRVHKVTKT
APEKEEL*
BS17164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-PB | 257 | CG7225-PB | 1..257 | 1..257 | 1320 | 100 | Plus |
wbl-PA | 257 | CG7225-PA | 1..257 | 1..257 | 1320 | 100 | Plus |