Clone Sequence Records
BS17185.5prime Sequence
321 bp (321 high quality bases) assembled on 2007-05-15
> BS17185.5prime
GAAGTTATCAGTCGACATGGATGTCAAGCAACAGTTGCAGGCGCAGGATG
TGGATAAGGATCTCGACGAGGTAACCACGAGCAGCGAGGAGCAGTACAAC
CATGACCTGACCAAAAACTCCAGTTTGACGACCGTGTGCAGCACTTTTCC
ATTGTCCTCGAGGATCGAAAGCTACCATCACTGGCAGCCGATAGACATCG
ACATTGGGCGAGAGGACATCTTGGAACGTAAATTGGAAATGGAGAGTGAG
CGAATGGTCCAGCCCGCCATGTCCATTCCACTCGCCCTAAATGCCATGCA
TCCTTAAAAGCTTTCTAGACC
BS17185.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:03:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-PA | 291 | CG11666-RA | 1..291 | 17..307 | 1455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:42:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-RA | 561 | CG11666-RA | 36..326 | 17..307 | 1455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20984721..20985011 | 17..307 | 1455 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:42:06 has no hits.
BS17185.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:03:13 Download gff for
BS17185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-PA | 1..291 | 17..307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:01:22 Download gff for
BS17185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 32..329 | 9..311 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:17:46 Download gff for
BS17185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 32..329 | 9..311 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:17:46 Download gff for
BS17185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20984717..20985014 | 9..311 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:01:22 Download gff for
BS17185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20855744..20856041 | 9..311 | 98 | | Plus |
BS17185.3prime Sequence
321 bp (321 high quality bases) assembled on 2007-05-15
> BS17185.3prime
ATGGTCTAGAAAGCTTTTAAGGATGCATGGCATTTAGGGCGAGTGGAATG
GACATGGCGGGCTGGACCATTCGCTCACTCTCCATTTCCAATTTACGTTC
CAAGATGTCCTCTCGCCCAATGTCGATGTCTATCGGCTGCCAGTGATGGT
AGCTTTCGATCCTCGAGGACAATGGAAAAGTGCTGCACACGGTCGTCAAA
CTGGAGTTTTTGGTCAGGTCATGGTTGTACTGCTCCTCGCTGCTCGTGGT
TACCTCGTCGAGATCCTTATCCACATCCTGCGCCTGCAACTGTTGCTTGA
CATCCATGTCGACTGATAACT
BS17185.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-PA | 291 | CG11666-RA | 1..291 | 307..17 | 1455 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-RA | 561 | CG11666-RA | 36..326 | 307..17 | 1455 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:35:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20984721..20985011 | 307..17 | 1455 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:35:31 has no hits.
BS17185.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:07:24 Download gff for
BS17185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-PA | 1..291 | 17..307 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:15:13 Download gff for
BS17185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 32..329 | 13..315 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:59:50 Download gff for
BS17185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 32..329 | 13..315 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:59:50 Download gff for
BS17185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20984717..20985014 | 13..315 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:15:13 Download gff for
BS17185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20855744..20856041 | 13..315 | 98 | | Minus |
BS17185.complete Sequence
323 bp assembled on 2007-05-08
GenBank Submission: FJ638271
> BS17185.complete
GAAGTTATCAGTCGACATGGATGTCAAGCAACAGTTGCAGGCGCAGGATG
TGGATAAGGATCTCGACGAGGTAACCACGAGCAGCGAGGAGCAGTACAAC
CATGACCTGACCAAAAACTCCAGTTTGACGACCGTGTGCAGCACTTTTCC
ATTGTCCTCGAGGATCGAAAGCTACCATCACTGGCAGCCGATAGACATCG
ACATTGGGCGAGAGGACATCTTGGAACGTAAATTGGAAATGGAGAGTGAG
CGAATGGTCCAGCCCGCCATGTCCATTCCACTCGCCCTAAATGCCATGCA
TCCTTAAAAGCTTTCTAGACCAT
BS17185.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:15:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-RA | 291 | CG11666-PA | 1..291 | 17..307 | 1455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-RA | 561 | CG11666-RA | 36..326 | 17..307 | 1455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20984721..20985011 | 17..307 | 1455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:15:44 has no hits.
BS17185.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:33:59 Download gff for
BS17185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 32..329 | 9..311 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:45 Download gff for
BS17185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 36..324 | 17..305 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:19 Download gff for
BS17185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 32..329 | 9..311 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:14:18 Download gff for
BS17185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 36..324 | 17..305 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:14:18 Download gff for
BS17185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20984721..20985009 | 17..305 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:45 Download gff for
BS17185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20855748..20856036 | 17..305 | 100 | | Plus |
BS17185.pep Sequence
Translation from 16 to 306
> BS17185.pep
MDVKQQLQAQDVDKDLDEVTTSSEEQYNHDLTKNSSLTTVCSTFPLSSRI
ESYHHWQPIDIDIGREDILERKLEMESERMVQPAMSIPLALNAMHP*
BS17185.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:41:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-PA | 96 | CG11666-PA | 1..96 | 1..96 | 496 | 100 | Plus |
