Clone Sequence Records
BS17187.3prime Sequence
279 bp (279 high quality bases) assembled on 2007-05-15
> BS17187.3prime
ATGGTCTAGAAAGCTTCTACTTCTTCTGCTTGCCCTCCGCCTCCTCCATA
GCACGCATCATTTTGGCGTCGTGCTGGGCGTGGTGTTCACGGATTGCCCG
CTGCAGCTCCTCGTGGTGGCTTTTGCTTTCCGGCGGATAAAGTTCCCGCT
TCTTCTTGGTCACCCATTCTTCAAAGTATTCCGGCTGGTTAAACAAGTGG
AATAGCGTCACCGGAAAGGCCATGTACATGCCCATCTTGGCCACCTCCAG
CACCCAGGTTCCCATGTCGACTGATAACT
BS17187.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:07:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14483-PA | 249 | CG14483-RA | 1..249 | 265..17 | 1245 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:07:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14483-RC | 955 | CG14483-RC | 108..361 | 269..16 | 1255 | 99.6 | Minus |
CG14483-RB | 437 | CG14483-RB | 30..283 | 269..16 | 1255 | 99.6 | Minus |
CG14483-RA | 515 | CG14483-RA | 108..361 | 269..16 | 1255 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:07:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17585789..17586042 | 16..269 | 1255 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:07:46 has no hits.
BS17187.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:07:42 Download gff for
BS17187.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-PA | 1..249 | 17..265 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:20:52 Download gff for
BS17187.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 101..367 | 9..279 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:43:27 Download gff for
BS17187.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 101..367 | 9..279 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:43:27 Download gff for
BS17187.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17585783..17586049 | 9..279 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:20:52 Download gff for
BS17187.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13473288..13473554 | 9..279 | 97 | | Plus |
BS17187.complete Sequence
281 bp assembled on 2007-05-08
GenBank Submission: FJ638273
> BS17187.complete
GAAGTTATCAGTCGACATGGGAACCTGGGTGCTGGAGGTGGCCAAGATGG
GCATGTACATGGCCTTTCCGGTGACGCTATTCCACTTGTTTAACCAGCCG
GAATACTTTGAAGAATGGGTGACCAAGAAGAAGCGGGAACTTTATCCGCC
GGAAAGCAAAAGCCACCACGAGGAGCTGCAGCGGGCAATCCGTGAACACC
ACGCCCAGCACGACGCCAAAATGATGCGTGCTATGGAGGAGGCGGAGGGC
AAGCAGAAGAAGTAGAAGCTTTCTAGACCAT
BS17187.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:26:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14483-RC | 249 | CG14483-PC | 1..249 | 17..265 | 1245 | 100 | Plus |
CG14483-RB | 249 | CG14483-PB | 1..249 | 17..265 | 1245 | 100 | Plus |
CG14483-RA | 249 | CG14483-PA | 1..249 | 17..265 | 1245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:26:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14483-RC | 955 | CG14483-RC | 108..361 | 13..266 | 1255 | 99.6 | Plus |
CG14483-RB | 437 | CG14483-RB | 30..283 | 13..266 | 1255 | 99.6 | Plus |
CG14483-RA | 515 | CG14483-RA | 108..361 | 13..266 | 1255 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:26:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17585789..17586042 | 266..13 | 1255 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:26:57 has no hits.
BS17187.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:45:20 Download gff for
BS17187.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 1..249 | 17..265 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:12:14 Download gff for
BS17187.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 43..308 | 5..273 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:10:38 Download gff for
BS17187.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 112..360 | 17..265 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:45:21 Download gff for
BS17187.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 43..308 | 5..273 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:19:01 Download gff for
BS17187.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 112..360 | 17..265 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:19:01 Download gff for
BS17187.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17585790..17586038 | 17..265 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:10:38 Download gff for
BS17187.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13473295..13473543 | 17..265 | 100 | | Minus |
BS17187.5prime Sequence
279 bp (279 high quality bases) assembled on 2007-05-15
> BS17187.5prime
GAAGTTATCAGTCGACATGGGAACCTGGGTGCTGGAGGTGGCCAAGATGG
GCATGTACATGGCCTTTCCGGTGACGCTATTCCACTTGTTTAACCAGCCG
GAATACTTTGAAGAATGGGTGACCAAGAAGAAGCGGGAACTTTATCCGCC
GGAAAGCAAAAGCCACCACGAGGAGCTGCAGCGGGCAATCCGTGAACACC
ACGCCCAGCACGACGCCAAAATGATGCGTGCTATGGAGGAGGCGGAGGGC
AAGCAGAAGAAGTAGAAGCTTTCTAGACC
BS17187.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:03:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14483-PA | 249 | CG14483-RA | 1..249 | 17..265 | 1245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:57:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14483-RC | 955 | CG14483-RC | 108..361 | 13..266 | 1255 | 99.6 | Plus |
CG14483-RB | 437 | CG14483-RB | 30..283 | 13..266 | 1255 | 99.6 | Plus |
CG14483-RA | 515 | CG14483-RA | 108..361 | 13..266 | 1255 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:57:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17585789..17586042 | 266..13 | 1255 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:57:18 has no hits.
BS17187.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:03:31 Download gff for
BS17187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-PA | 1..249 | 17..265 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:25:02 Download gff for
BS17187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 102..367 | 5..273 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:24:36 Download gff for
BS17187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14483-RA | 102..367 | 5..273 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:24:36 Download gff for
BS17187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17585783..17586048 | 5..273 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:25:02 Download gff for
BS17187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13473288..13473553 | 5..273 | 97 | | Minus |
BS17187.pep Sequence
Translation from 16 to 264
> BS17187.pep
MGTWVLEVAKMGMYMAFPVTLFHLFNQPEYFEEWVTKKKRELYPPESKSH
HEELQRAIREHHAQHDAKMMRAMEEAEGKQKK*
BS17187.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:34:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14483-PC | 82 | CG14483-PC | 1..82 | 1..82 | 444 | 100 | Plus |
CG14483-PB | 82 | CG14483-PB | 1..82 | 1..82 | 444 | 100 | Plus |
CG14483-PA | 82 | CG14483-PA | 1..82 | 1..82 | 444 | 100 | Plus |