Clone Sequence Records
BS17190.3prime Sequence
288 bp (288 high quality bases) assembled on 2007-05-15
> BS17190.3prime
ATGGTCTAGAAAGCTTCTACATGATGACACACAGGCCACACTCCTCCATG
ACACAACAGGCTCCTAGCAGCATGCAGCACTCGGCGTCACTGGGTCCTTG
GGGGGGTCCTGGCTGATTGTAGCTGGGTTGCTCCACCACAACCACCGGCT
GGTTGTAAACGGGCGAGGGCATTATCACCTCTACGGGGGGCGGGGGTCCA
ATAACATTCACCACCTCCACGGGCGGCTGATAGTAGGGATCGATCACGTC
CACCTGGTAGCCTGCGTTGTACATGTCGACTGATAACT
BS17190.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:09:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15127-PA | 258 | CG15127-RA | 1..258 | 274..17 | 1290 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:25:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15127-RA | 624 | CG15127-RA | 116..374 | 274..16 | 1295 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19681018..19681276 | 16..274 | 1295 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:25:42 has no hits.
BS17190.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:09:51 Download gff for
BS17190.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-PA | 1..258 | 17..274 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:30:29 Download gff for
BS17190.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 110..376 | 11..281 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:14:07 Download gff for
BS17190.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 110..376 | 11..281 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:14:07 Download gff for
BS17190.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19681016..19681282 | 11..281 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:30:29 Download gff for
BS17190.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15568521..15568787 | 11..281 | 97 | | Plus |
BS17190.5prime Sequence
288 bp (288 high quality bases) assembled on 2007-05-15
> BS17190.5prime
GAAGTTATCAGTCGACATGTACAACGCAGGCTACCAGGTGGACGTGATCG
ATCCCTACTATCAGCCGCCCGTGGAGGTGGTGAATGTTATTGGACCCCCG
CCCCCCGTAGAGGTGATAATGCCCTCGCCCGTTTACAACCAGCCGGTGGT
TGTGGTGGAGCAACCCAGCTACAATCAGCCAGGACCCCCCCAAGGACCCA
GTGACGCCGAGTGCTGCATGCTGCTAGGAGCCTGTTGTGTCATGGAGGAG
TGTGGCCTGTGTGTCATCATGTAGAAGCTTTCTAGACC
BS17190.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:05:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15127-PA | 258 | CG15127-RA | 1..258 | 17..274 | 1290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:46:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15127-RA | 624 | CG15127-RA | 116..374 | 17..275 | 1295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19681018..19681276 | 275..17 | 1295 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 02:46:04 has no hits.
BS17190.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:05:36 Download gff for
BS17190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-PA | 1..258 | 17..274 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:01:45 Download gff for
BS17190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 110..376 | 10..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:32:05 Download gff for
BS17190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 110..376 | 10..280 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:32:05 Download gff for
BS17190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19681016..19681282 | 10..280 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:01:45 Download gff for
BS17190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15568521..15568787 | 10..280 | 97 | | Minus |
BS17190.complete Sequence
290 bp assembled on 2007-05-08
GenBank Submission: FJ638275
> BS17190.complete
GAAGTTATCAGTCGACATGTACAACGCAGGCTACCAGGTGGACGTGATCG
ATCCCTACTATCAGCCGCCCGTGGAGGTGGTGAATGTTATTGGACCCCCG
CCCCCCGTAGAGGTGATAATGCCCTCGCCCGTTTACAACCAGCCGGTGGT
TGTGGTGGAGCAACCCAGCTACAATCAGCCAGGACCCCCCCAAGGACCCA
GTGACGCCGAGTGCTGCATGCTGCTAGGAGCCTGTTGTGTCATGGAGGAG
TGTGGCCTGTGTGTCATCATGTAGAAGCTTTCTAGACCAT
BS17190.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:50:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15127-RA | 258 | CG15127-PA | 1..258 | 17..274 | 1290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15127-RA | 624 | CG15127-RA | 116..374 | 17..275 | 1295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19681018..19681276 | 275..17 | 1295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:50:48 has no hits.
BS17190.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:15 Download gff for
BS17190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 1..258 | 17..274 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:12:48 Download gff for
BS17190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 92..358 | 10..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:57 Download gff for
BS17190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 116..373 | 17..274 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:57:15 Download gff for
BS17190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 92..358 | 10..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:20 Download gff for
BS17190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 116..373 | 17..274 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:20 Download gff for
BS17190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19681019..19681276 | 17..274 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:57 Download gff for
BS17190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15568524..15568781 | 17..274 | 100 | | Minus |
BS17190.pep Sequence
Translation from 16 to 273
> BS17190.pep
MYNAGYQVDVIDPYYQPPVEVVNVIGPPPPVEVIMPSPVYNQPVVVVEQP
SYNQPGPPQGPSDAECCMLLGACCVMEECGLCVIM*
BS17190.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:25:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15127-PA | 85 | CG15127-PA | 1..85 | 1..85 | 476 | 100 | Plus |
