Clone Sequence Records
BS17192.3prime Sequence
300 bp (300 high quality bases) assembled on 2007-05-15
> BS17192.3prime
ATGGTCTAGAAAGCTTTCAAAGGTTCATCGGTTTGGTGAGGATCCAAGCG
AGCAGCGAAATCTGGTTTCCCTGGCGCCTCAGAATGGCGCTTTCGATGCC
ATCGTGCAGATTGATTTGCACTTGGGCAAAGAATTCCGGATCGTTACGTT
GGTACTGGCTGCCCAGGAAGATGTTCAGCTCTGTGTCAGTCATGGGTCGG
CTAGTATGCTCCAGGACCATTATAATGGACTTAAGTAGGTTGGGTACCAA
CCGACGTTTCGGCAGTGTCGTGAAGATGTCGGCCATGTCGACTGATAACT
BS17192.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:07:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15578-PA | 270 | CG15578-RA | 1..270 | 286..17 | 1350 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:19:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15578-RA | 415 | CG15578-RA | 98..371 | 288..15 | 1370 | 100 | Minus |
CG15577-RA | 508 | CG15577-RA | 139..338 | 251..52 | 475 | 82.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:19:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4277591..4277864 | 15..288 | 1370 | 100 | Plus |
X | 23542271 | X | 4276663..4276862 | 52..251 | 475 | 82.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:19:07 has no hits.
BS17192.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:07:38 Download gff for
BS17192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-PA | 1..270 | 17..286 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:51:55 Download gff for
BS17192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 98..371 | 15..288 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:54:37 Download gff for
BS17192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 98..371 | 15..288 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:54:37 Download gff for
BS17192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4277591..4277864 | 15..288 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:51:55 Download gff for
BS17192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4171624..4171897 | 15..288 | 100 | | Plus |
BS17192.5prime Sequence
300 bp (300 high quality bases) assembled on 2007-05-15
> BS17192.5prime
GAAGTTATCAGTCGACATGGCCGACATCTTCACGACACTGCCGAAACGTC
GGTTGGTACCCAACCTACTTAAGTCCATTATAATGGTCCTGGAGCATACT
AGCCGACCCATGACTGACACAGAGCTGAACATCTTCCTGGGCAGCCAGTA
CCAACGTAACGATCCGGAATTCTTTGCCCAAGTGCAAATCAATCTGCACG
ATGGCATCGAAAGCGCCATTCTGAGGCGCCAGGGAAACCAGATTTCGCTG
CTCGCTTGGATCCTCACCAAACCGATGAACCTTTGAAAGCTTTCTAGACC
BS17192.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:03:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15578-PA | 270 | CG15578-RA | 1..270 | 17..286 | 1350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:34:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15578-RA | 415 | CG15578-RA | 98..371 | 15..288 | 1370 | 100 | Plus |
CG15577-RA | 508 | CG15577-RA | 139..338 | 52..251 | 475 | 82.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:34:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4277591..4277864 | 288..15 | 1370 | 100 | Minus |
X | 23542271 | X | 4276663..4276862 | 251..52 | 475 | 82.5 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:34:37 has no hits.
BS17192.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:03:27 Download gff for
BS17192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-PA | 1..270 | 17..286 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:50:49 Download gff for
BS17192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 98..371 | 15..288 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:53:39 Download gff for
BS17192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 98..371 | 15..288 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:53:39 Download gff for
BS17192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4277591..4277864 | 15..288 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:50:49 Download gff for
BS17192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4171624..4171897 | 15..288 | 100 | | Minus |
BS17192.complete Sequence
302 bp assembled on 2007-05-08
GenBank Submission: FJ638276
> BS17192.complete
GAAGTTATCAGTCGACATGGCCGACATCTTCACGACACTGCCGAAACGTC
GGTTGGTACCCAACCTACTTAAGTCCATTATAATGGTCCTGGAGCATACT
AGCCGACCCATGACTGACACAGAGCTGAACATCTTCCTGGGCAGCCAGTA
CCAACGTAACGATCCGGAATTCTTTGCCCAAGTGCAAATCAATCTGCACG
ATGGCATCGAAAGCGCCATTCTGAGGCGCCAGGGAAACCAGATTTCGCTG
CTCGCTTGGATCCTCACCAAACCGATGAACCTTTGAAAGCTTTCTAGACC
AT
BS17192.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:49:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15578-RA | 270 | CG15578-PA | 1..270 | 17..286 | 1350 | 100 | Plus |
CG15577-RA | 300 | CG15577-PA | 45..244 | 52..251 | 475 | 82.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:49:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15578-RA | 415 | CG15578-RA | 98..371 | 15..288 | 1370 | 100 | Plus |
CG15577-RA | 508 | CG15577-RA | 139..338 | 52..251 | 475 | 82.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:49:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4277591..4277864 | 288..15 | 1370 | 100 | Minus |
X | 23542271 | X | 4276663..4276862 | 251..52 | 475 | 82.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:49:47 has no hits.
BS17192.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:18 Download gff for
BS17192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 1..270 | 17..286 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:33:58 Download gff for
BS17192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 1..270 | 17..286 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:54 Download gff for
BS17192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 100..368 | 17..285 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:18 Download gff for
BS17192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 1..270 | 17..286 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:35 Download gff for
BS17192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15578-RA | 100..368 | 17..285 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:35 Download gff for
BS17192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4277594..4277862 | 17..285 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:54 Download gff for
BS17192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4171627..4171895 | 17..285 | 100 | | Minus |
BS17192.pep Sequence
Translation from 16 to 285
> BS17192.pep
MADIFTTLPKRRLVPNLLKSIIMVLEHTSRPMTDTELNIFLGSQYQRNDP
EFFAQVQINLHDGIESAILRRQGNQISLLAWILTKPMNL*
BS17192.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15578-PA | 89 | CG15578-PA | 1..89 | 1..89 | 452 | 100 | Plus |
CG15577-PA | 99 | CG15577-PA | 9..81 | 7..78 | 254 | 68.5 | Plus |