Clone Sequence Records
BS17206.complete Sequence
497 bp assembled on 2010-02-09
GenBank Submission: KX801818
> BS17206.complete
GAAGTTATCAGTCGACATGGATCCCGATGACGACCTCGTCCTGGAGAATG
AGGCAGAGGAAATTGAACGGTTACAGCTTCCCGAGGAGCTTAAAAAGCCC
ATTGATCCCGAGGAAGAGGATGAACGAGTAGCACGCATCGAATTCAATTG
TTCTGGCTGTGAAATGCACGAGATGGTCCATTATTTTGGACGGAAACCGC
CCTTTGCTCTAGGAGTCATATACCCAGAGGACAACTACGTGATGCGAGAT
CCTTTCCAACCACCTCCACCTCGTTGGCAGTCAAAGCCGGAATACTATAT
CGCAATGGGGACTAAGTGCTCCATCTGCTCCAAGACGGTGTGCAAGGATC
CTGGCTGCAGTTTCTACTATACAGCCTCTTTTTGCTTGCCTTGTGGCAAG
GAAGAATTAAAAAACTGGCCACCTGAGGCTCAAGCTCGAATAAGAAAACA
AATGTCTGTCAGTCAAGGCAGGCAAACATAAAAGCTTTCTAGACCAT
BS17206.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:12:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11755-RB | 465 | CG11755-PB | 1..465 | 17..481 | 2325 | 100 | Plus |
CG11755-RA | 465 | CG11755-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11755-RB | 816 | CG11755-RB | 143..611 | 14..482 | 2345 | 100 | Plus |
CG11755-RA | 813 | CG11755-RA | 140..608 | 14..482 | 2345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8678282..8678750 | 14..482 | 2345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:12:04 has no hits.
BS17206.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:28:36 Download gff for
BS17206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 1..465 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:16:26 Download gff for
BS17206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 1..457 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:55 Download gff for
BS17206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 143..599 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:28:36 Download gff for
BS17206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 1..465 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:06 Download gff for
BS17206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 143..599 | 17..473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:06 Download gff for
BS17206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8678285..8678741 | 17..473 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:55 Download gff for
BS17206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4504007..4504463 | 17..473 | 100 | | Plus |
BS17206.3prime Sequence
495 bp (495 high quality bases) assembled on 2007-05-15
> BS17206.3prime
ATGGTCTAGAAAGCTTTTATGTTTGCCTGCCTTGACTGACAGACATTTGT
TTTCTTATTCGAGCTTGAGCCTCAGGTGGCCAGTTTTTTAATTCTTCCTT
GCCACAAGGCAAGCAAAAAGAGGCTGTATAGTAGAAACTGCAGCCAGGAT
CCTTGCACACCGTCTTGGAGCAGATGGAGCACTTAGTCCCCATTGCGATA
TAGTATTCCGGCTTTGACTGCCAACGAGGTGGAGGTGGTTGGAAAGGATC
TCGCATCACGTAGTTGTCCTCTGGGTATATGACTCCTAGAGCAAAGGGCG
GTTTCCGTCCAAAATAATGGACCATCTCGTGCATTTCACAGCCAGAACAA
TTGAATTCGATGCGTGCTACTCGTTCATCCTCTTCCTCGGGATCAATGGG
CTTTTTAAGCTCCTCGGGAAGCTGTAACCGTTCAATTTCCTCTGCCTCAT
TCTCCAGGACGAGGTCGTCATCGGGATCCATGTCGACTGATAACT
BS17206.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:20:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11755-PA | 465 | CG11755-RA | 1..465 | 481..17 | 2325 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:16:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11755-RB | 816 | CG11755-RB | 143..611 | 484..16 | 2345 | 100 | Minus |
CG11755-RA | 813 | CG11755-RA | 140..608 | 484..16 | 2345 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:16:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8678282..8678750 | 484..16 | 2345 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:16:32 has no hits.
BS17206.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:20:35 Download gff for
BS17206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-PA | 1..465 | 17..481 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:42:07 Download gff for
BS17206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 134..617 | 10..491 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:23:45 Download gff for
BS17206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 134..617 | 10..491 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:23:45 Download gff for
BS17206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8678276..8678759 | 10..491 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:42:07 Download gff for
BS17206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4503998..4504481 | 10..491 | 98 | | Minus |
BS17206.5prime Sequence
495 bp (495 high quality bases) assembled on 2007-05-15
> BS17206.5prime
GAAGTTATCAGTCGACATGGATCCCGATGACGACCTCGTCCTGGAGAATG
AGGCAGAGGAAATTGAACGGTTACAGCTTCCCGAGGAGCTTAAAAAGCCC
ATTGATCCCGAGGAAGAGGATGAACGAGTAGCACGCATCGAATTCAATTG
TTCTGGCTGTGAAATGCACGAGATGGTCCATTATTTTGGACGGAAACCGC
CCTTTGCTCTAGGAGTCATATACCCAGAGGACAACTACGTGATGCGAGAT
CCTTTCCAACCACCTCCACCTCGTTGGCAGTCAAAGCCGGAATACTATAT
CGCAATGGGGACTAAGTGCTCCATCTGCTCCAAGACGGTGTGCAAGGATC
CTGGCTGCAGTTTCTACTATACAGCCTCTTTTTGCTTGCCTTGTGGCAAG
GAAGAATTAAAAAACTGGCCACCTGAGGCTCAAGCTCGAATAAGAAAACA
AATGTCTGTCAGTCAAGGCAGGCAAACATAAAAGCTTTCTAGACC
BS17206.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:13:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11755-PA | 465 | CG11755-RA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:24:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11755-RB | 816 | CG11755-RB | 143..611 | 14..482 | 2345 | 100 | Plus |
CG11755-RA | 813 | CG11755-RA | 140..608 | 14..482 | 2345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:24:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8678282..8678750 | 14..482 | 2345 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:24:23 has no hits.
BS17206.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:13:57 Download gff for
BS17206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-PA | 1..465 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:16:17 Download gff for
BS17206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 134..617 | 7..488 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:17:54 Download gff for
BS17206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11755-RA | 134..617 | 7..488 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:17:54 Download gff for
BS17206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8678276..8678759 | 7..488 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:16:17 Download gff for
BS17206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4503998..4504481 | 7..488 | 98 | | Plus |
BS17206.pep Sequence
Translation from 16 to 480
> BS17206.pep
MDPDDDLVLENEAEEIERLQLPEELKKPIDPEEEDERVARIEFNCSGCEM
HEMVHYFGRKPPFALGVIYPEDNYVMRDPFQPPPPRWQSKPEYYIAMGTK
CSICSKTVCKDPGCSFYYTASFCLPCGKEELKNWPPEAQARIRKQMSVSQ
GRQT*
BS17206.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:07:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11755-PB | 154 | CG11755-PB | 1..154 | 1..154 | 857 | 100 | Plus |
CG11755-PA | 154 | CG11755-PA | 1..154 | 1..154 | 857 | 100 | Plus |