Clone Sequence Records
BS17217.complete Sequence
374 bp assembled on 2010-02-09
GenBank Submission: KX800974
> BS17217.complete
GAAGTTATCAGTCGACATGTCGGACGACGGATCTGATATATTCCAAGACC
TTGAAAGCTACGAGCCCTATACAGAAGGTAGCCAAAACAATAGTGACGAA
GCAACTGCAGTGGGGCCTCTCGATACCTCTGAGGACGCTCGCTTCTCCGA
GCAGGTATTCTCGAACATTCAGGAGCGTCTGAACCGAATCATTAATCGCA
TTAGCATGGCCAACTCTGCCGTGGTCCAGATGAAGAGGAAGCTCCATGCT
CGAATTCCATCCGTACCTGTTGGCGAAAACGCCGACCAGTTGGCTGGAGG
CGATAATCCAATGCGATTTGAAAACGTCGAACAAGAAAACGAAACCACCA
ACCAATGAAAGCTTTCTAGACCAT
BS17217.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:58:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13477-RA | 342 | CG13477-PA | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13477-RA | 616 | CG13477-RA | 83..424 | 17..358 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14691429..14691770 | 17..358 | 1710 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:58:22 has no hits.
BS17217.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:09 Download gff for
BS17217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 1..342 | 17..358 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:34 Download gff for
BS17217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 62..402 | 17..357 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:41 Download gff for
BS17217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 83..423 | 17..357 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:10 Download gff for
BS17217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 50..403 | 5..358 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:50 Download gff for
BS17217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 83..423 | 17..357 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:50 Download gff for
BS17217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14691429..14691769 | 17..357 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:41 Download gff for
BS17217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14684529..14684869 | 17..357 | 100 | | Plus |
BS17217.3prime Sequence
372 bp (372 high quality bases) assembled on 2007-05-15
> BS17217.3prime
ATGGTCTAGAAAGCTTTCATTGGTTGGTGGTTTCGTTTTCTTGTTCGACG
TTTTCAAATCGCATTGGATTATCGCCTCCAGCCAACTGGTCGGCGTTTTC
GCCAACAGGTACGGATGGAATTCGAGCATGGAGCTTCCTCTTCATCTGGA
CCACGGCAGAGTTGGCCATGCTAATGCGATTAATGATTCGGTTCAGACGC
TCCTGAATGTTCGAGAATACCTGCTCGGAGAAGCGAGCGTCCTCAGAGGT
ATCGAGAGGCCCCACTGCAGTTGCTTCGTCACTATTGTTTTGGCTACCTT
CTGTATAGGGCTCGTAGCTTTCAAGGTCTTGGAATATATCAGATCCGTCG
TCCGACATGTCGACTGATAACT
BS17217.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13477-PA | 342 | CG13477-RA | 1..342 | 358..17 | 1710 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:14:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13477-RA | 616 | CG13477-RA | 83..424 | 358..17 | 1710 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:14:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14691429..14691770 | 358..17 | 1710 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 21:14:06 has no hits.
BS17217.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:20:51 Download gff for
BS17217.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-PA | 1..342 | 17..358 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:30:54 Download gff for
BS17217.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 71..424 | 17..370 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:56:15 Download gff for
BS17217.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 71..424 | 17..370 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:56:15 Download gff for
BS17217.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14691417..14691770 | 17..370 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:30:54 Download gff for
BS17217.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14684517..14684870 | 17..370 | 98 | | Minus |
BS17217.5prime Sequence
372 bp (372 high quality bases) assembled on 2007-05-15
> BS17217.5prime
GAAGTTATCAGTCGACATGTCGGACGACGGATCTGATATATTCCAAGACC
TTGAAAGCTACGAGCCCTATACAGAAGGTAGCCAAAACAATAGTGACGAA
GCAACTGCAGTGGGGCCTCTCGATACCTCTGAGGACGCTCGCTTCTCCGA
GCAGGTATTCTCGAACATTCAGGAGCGTCTGAACCGAATCATTAATCGCA
TTAGCATGGCCAACTCTGCCGTGGTCCAGATGAAGAGGAAGCTCCATGCT
CGAATTCCATCCGTACCTGTTGGCGAAAACGCCGACCAGTTGGCTGGAGG
CGATAATCCAATGCGATTTGAAAACGTCGAACAAGAAAACGAAACCACCA
ACCAATGAAAGCTTTCTAGACC
BS17217.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:14:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13477-PA | 342 | CG13477-RA | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:33:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13477-RA | 616 | CG13477-RA | 83..424 | 17..358 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:33:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14691429..14691770 | 17..358 | 1710 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:33:15 has no hits.
BS17217.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:14:12 Download gff for
BS17217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-PA | 1..342 | 17..358 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:15:51 Download gff for
BS17217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 71..424 | 5..358 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:49:26 Download gff for
BS17217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13477-RA | 71..424 | 5..358 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:49:26 Download gff for
BS17217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14691417..14691770 | 5..358 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:15:51 Download gff for
BS17217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14684517..14684870 | 5..358 | 98 | | Plus |
BS17217.pep Sequence
Translation from 16 to 357
> BS17217.pep
MSDDGSDIFQDLESYEPYTEGSQNNSDEATAVGPLDTSEDARFSEQVFSN
IQERLNRIINRISMANSAVVQMKRKLHARIPSVPVGENADQLAGGDNPMR
FENVEQENETTNQ*
BS17217.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13477-PA | 113 | CG13477-PA | 1..113 | 1..113 | 575 | 100 | Plus |
