Clone Sequence Records
BS17246.3prime Sequence
459 bp (459 high quality bases) assembled on 2007-05-15
> BS17246.3prime
ATGGTCTAGAAAGCTTCTAGTGAAAATAATTGGCGAATGCCCTTCGCAAC
TTGCCAAAAACGCCAAGTCCACCGGCCGTACTTCGCTCCCTTGATGGCTT
GGGATTAAGGGATGGATCATCCTCCATACGACCCACATGCCAGTGGATCT
GCACGTTGCACACCACCAGACGCTTGGCCATTAGAACGCCCAGCTGCAGA
TGCTCCGCGGTTGCGAATCTCAGCTCTAGACCATTCTTCCTTTTGCGATG
CGCGTTCATCGAACAGAAGCGTGAGAAAATGGCCAGCAATTCATCATCGG
TGCCGGATGGAAATCCGTGCAAGCTCAGCCACTCGTTGCTGGTCAGATCA
TCCGAGGAACCACCGGTTCTGGCCTGCTCCACATCCGGTTCCGGTCCCTC
ATCGCTATCACTTTCAGTTTGGCTCTGAGAACTGTACTCAGTCATGTCGA
CTGATAACT
BS17246.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:21:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-PA | 429 | CG32639-RA | 1..429 | 445..17 | 2145 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:09:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 642 | CG32639-RA | 43..472 | 446..17 | 2150 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:09:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13236095..13236524 | 17..446 | 2150 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:09:57 has no hits.
BS17246.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:21:42 Download gff for
BS17246.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-PA | 1..429 | 17..445 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:19:02 Download gff for
BS17246.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 34..476 | 11..453 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:27:32 Download gff for
BS17246.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 34..476 | 11..453 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:27:32 Download gff for
BS17246.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13236091..13236533 | 11..453 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:19:02 Download gff for
BS17246.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13130124..13130566 | 11..453 | 98 | | Plus |
BS17246.5prime Sequence
459 bp (459 high quality bases) assembled on 2007-05-15
> BS17246.5prime
GAAGTTATCAGTCGACATGACTGAGTACAGTTCTCAGAGCCAAACTGAAA
GTGATAGCGATGAGGGACCGGAACCGGATGTGGAGCAGGCCAGAACCGGT
GGTTCCTCGGATGATCTGACCAGCAACGAGTGGCTGAGCTTGCACGGATT
TCCATCCGGCACCGATGATGAATTGCTGGCCATTTTCTCACGCTTCTGTT
CGATGAACGCGCATCGCAAAAGGAAGAATGGTCTAGAGCTGAGATTCGCA
ACCGCGGAGCATCTGCAGCTGGGCGTTCTAATGGCCAAGCGTCTGGTGGT
GTGCAACGTGCAGATCCACTGGCATGTGGGTCGTATGGAGGATGATCCAT
CCCTTAATCCCAAGCCATCAAGGGAGCGAAGTACGGCCGGTGGACTTGGC
GTTTTTGGCAAGTTGCGAAGGGCATTCGCCAATTATTTTCACTAGAAGCT
TTCTAGACC
BS17246.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:14:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-PA | 429 | CG32639-RA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:09:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 642 | CG32639-RA | 43..472 | 16..445 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:09:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13236095..13236524 | 445..16 | 2150 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 21:09:54 has no hits.
BS17246.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:14:57 Download gff for
BS17246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-PA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:30:02 Download gff for
BS17246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 34..476 | 9..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:55:28 Download gff for
BS17246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 34..476 | 9..451 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:55:28 Download gff for
BS17246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13236091..13236533 | 9..451 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:30:02 Download gff for
BS17246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13130124..13130566 | 9..451 | 98 | | Minus |
BS17246.complete Sequence
461 bp assembled on 2010-02-09
GenBank Submission: KX804468
> BS17246.complete
GAAGTTATCAGTCGACATGACTGAGTACAGTTCTCAGAGCCAAACTGAAA
GTGATAGCGATGAGGGACCGGAACCGGATGTGGAGCAGGCCAGAACCGGT
GGTTCCTCGGATGATCTGACCAGCAACGAGTGGCTGAGCTTGCACGGATT
TCCATCCGGCACCGATGATGAATTGCTGGCCATTTTCTCACGCTTCTGTT
CGATGAACGCGCATCGCAAAAGGAAGAATGGTCTAGAGCTGAGATTCGCA
ACCGCGGAGCATCTGCAGCTGGGCGTTCTAATGGCCAAGCGTCTGGTGGT
GTGCAACGTGCAGATCCACTGGCATGTGGGTCGTATGGAGGATGATCCAT
CCCTTAATCCCAAGCCATCAAGGGAGCGAAGTACGGCCGGTGGACTTGGC
GTTTTTGGCAAGTTGCGAAGGGCATTCGCCAATTATTTTCACTAGAAGCT
TTCTAGACCAT
BS17246.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:35:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 429 | CG32639-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:35:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 642 | CG32639-RA | 43..472 | 16..445 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:35:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13236095..13236524 | 445..16 | 2150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:35:16 has no hits.
BS17246.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:38:40 Download gff for
BS17246.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:12:23 Download gff for
BS17246.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:13 Download gff for
BS17246.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 44..472 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:38:41 Download gff for
BS17246.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:32:15 Download gff for
BS17246.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 44..472 | 17..445 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:32:15 Download gff for
BS17246.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13236095..13236523 | 17..445 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:13 Download gff for
BS17246.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13130128..13130556 | 17..445 | 100 | | Minus |
BS17246.pep Sequence
Translation from 16 to 444
> BS17246.pep
MTEYSSQSQTESDSDEGPEPDVEQARTGGSSDDLTSNEWLSLHGFPSGTD
DELLAIFSRFCSMNAHRKRKNGLELRFATAEHLQLGVLMAKRLVVCNVQI
HWHVGRMEDDPSLNPKPSRERSTAGGLGVFGKLRRAFANYFH*
BS17246.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:00:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-PA | 142 | CG32639-PA | 1..142 | 1..142 | 751 | 100 | Plus |