Clone Sequence Records
BS17250.complete Sequence
353 bp assembled on 2010-02-09
GenBank Submission: KX803766
> BS17250.complete
GAAGTTATCAGTCGACATGTCTGCCTTTAAAATTGCTTATGCCTGTCGTT
ATTGTGGCAATATCGTCAGCTACAAGTCAGCCAAAGTGAATGAGACGCCC
TACGACTTGCTCCTGAGCCGTACCTTCAACCTAATCCAAGAGGACAGGAT
CAGGGAGACAAATGGGGAGCGATTCCAGAATCTGCACTGCTCCAAGTGCC
GCATGGAACTGGGTCTGCTGTGCTTGCAGAGCGAAAGGAATGTCCAACTG
AAGGGACTTTCGCTGTTGGAGAAGGTTCATCTGGTGGTGTACGACTCGTA
CGAGGTGCCATTCGAGATGGCCTCACTTCGTGACTGAAAGCTTTCTAGAC
CAT
BS17250.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:42:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-RA | 321 | CG13171-PA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:42:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-RA | 386 | CG13171-RA | 21..341 | 17..337 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:42:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12214030..12214350 | 17..337 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:42:36 has no hits.
BS17250.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:36 Download gff for
BS17250.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 1..321 | 17..337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:10 Download gff for
BS17250.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 1..320 | 17..336 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:39 Download gff for
BS17250.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 27..346 | 17..336 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:36 Download gff for
BS17250.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 1..321 | 17..337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:35:16 Download gff for
BS17250.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 21..340 | 17..336 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:35:16 Download gff for
BS17250.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12214030..12214349 | 17..336 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:39 Download gff for
BS17250.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8101535..8101854 | 17..336 | 100 | | Plus |
BS17250.3prime Sequence
351 bp (351 high quality bases) assembled on 2007-05-15
> BS17250.3prime
ATGGTCTAGAAAGCTTTCAGTCACGAAGTGAGGCCATCTCGAATGGCACC
TCGTACGAGTCGTACACCACCAGATGAACCTTCTCCAACAGCGAAAGTCC
CTTCAGTTGGACATTCCTTTCGCTCTGCAAGCACAGCAGACCCAGTTCCA
TGCGGCACTTGGAGCAGTGCAGATTCTGGAATCGCTCCCCATTTGTCTCC
CTGATCCTGTCCTCTTGGATTAGGTTGAAGGTACGGCTCAGGAGCAAGTC
GTAGGGCGTCTCATTCACTTTGGCTGACTTGTAGCTGACGATATTGCCAC
AATAACGACAGGCATAAGCAATTTTAAAGGCAGACATGTCGACTGATAAC
T
BS17250.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:18:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-PA | 321 | CG13171-RA | 1..321 | 337..17 | 1605 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:45:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-RA | 386 | CG13171-RA | 21..341 | 337..17 | 1605 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12214030..12214350 | 337..17 | 1605 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:45:05 has no hits.
BS17250.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:18:42 Download gff for
BS17250.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-PA | 1..321 | 17..337 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:48:38 Download gff for
BS17250.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 23..353 | 13..342 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:19:46 Download gff for
BS17250.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 17..347 | 13..342 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:19:46 Download gff for
BS17250.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12214026..12214356 | 13..342 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:48:38 Download gff for
BS17250.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8101531..8101861 | 13..342 | 98 | | Minus |
BS17250.5prime Sequence
351 bp (351 high quality bases) assembled on 2007-05-15
> BS17250.5prime
GAAGTTATCAGTCGACATGTCTGCCTTTAAAATTGCTTATGCCTGTCGTT
ATTGTGGCAATATCGTCAGCTACAAGTCAGCCAAAGTGAATGAGACGCCC
TACGACTTGCTCCTGAGCCGTACCTTCAACCTAATCCAAGAGGACAGGAT
CAGGGAGACAAATGGGGAGCGATTCCAGAATCTGCACTGCTCCAAGTGCC
GCATGGAACTGGGTCTGCTGTGCTTGCAGAGCGAAAGGAATGTCCAACTG
AAGGGACTTTCGCTGTTGGAGAAGGTTCATCTGGTGGTGTACGACTCGTA
CGAGGTGCCATTCGAGATGGCCTCACTTCGTGACTGAAAGCTTTCTAGAC
C
BS17250.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-PA | 321 | CG13171-RA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:01:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-RA | 386 | CG13171-RA | 21..341 | 17..337 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:01:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12214030..12214350 | 17..337 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:01:36 has no hits.
BS17250.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:06 Download gff for
BS17250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-PA | 1..321 | 17..337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:28:57 Download gff for
BS17250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 23..353 | 12..341 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:49:26 Download gff for
BS17250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 17..347 | 12..341 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:49:26 Download gff for
BS17250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12214026..12214356 | 12..341 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:28:57 Download gff for
BS17250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8101531..8101861 | 12..341 | 98 | | Plus |
BS17250.pep Sequence
Translation from 16 to 336
> BS17250.pep
MSAFKIAYACRYCGNIVSYKSAKVNETPYDLLLSRTFNLIQEDRIRETNG
ERFQNLHCSKCRMELGLLCLQSERNVQLKGLSLLEKVHLVVYDSYEVPFE
MASLRD*
BS17250.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:56:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-PA | 106 | CG13171-PA | 1..106 | 1..106 | 550 | 100 | Plus |
