Clone Sequence Records
BS17255.complete Sequence
335 bp assembled on 2010-02-09
GenBank Submission: KX806363
> BS17255.complete
GAAGTTATCAGTCGACATGGAGTATCAGCACTATTTGCAGAATGAGCTGA
CCATTTTCCACTACCACCTACTCTTCGACTATGGAGCACCGATCCAGGTG
GCCACTTGCATTGCCTTCGGCGTCGTCTGCGGCTGGATAATGAGCCTGAT
CACATTCGTTGTCTACAAGGCAGCAATTGGCCTGGGCGCCAAAGCCACGG
CATGTGACAACGATGATAAGTACGATGATCTCGACCTGGACATGCATGGG
GAGTATGGGTATGACCGGATGTTGTCCCAGTGCCAGGACCTTAGTGATTG
GCTTGTGAGGACACAGTAGAAGCTTTCTAGACCAT
BS17255.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13984-RA | 303 | CG13984-PA | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:41:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13984-RA | 657 | CG13984-RA | 49..351 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:41:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6308867..6309169 | 17..319 | 1515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:41:40 has no hits.
BS17255.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:11:43 Download gff for
BS17255.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 1..303 | 17..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:05 Download gff for
BS17255.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 1..303 | 17..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:21 Download gff for
BS17255.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 49..351 | 17..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:11:44 Download gff for
BS17255.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 1..303 | 17..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:34:52 Download gff for
BS17255.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 49..351 | 17..319 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:34:52 Download gff for
BS17255.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6308867..6309169 | 17..319 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:21 Download gff for
BS17255.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6308867..6309169 | 17..319 | 100 | | Plus |
BS17255.5prime Sequence
333 bp (333 high quality bases) assembled on 2007-05-15
> BS17255.5prime
GAAGTTATCAGTCGACATGGAGTATCAGCACTATTTGCAGAATGAGCTGA
CCATTTTCCACTACCACCTACTCTTCGACTATGGAGCACCGATCCAGGTG
GCCACTTGCATTGCCTTCGGCGTCGTCTGCGGCTGGATAATGAGCCTGAT
CACATTCGTTGTCTACAAGGCAGCAATTGGCCTGGGCGCCAAAGCCACGG
CATGTGACAACGATGATAAGTACGATGATCTCGACCTGGACATGCATGGG
GAGTATGGGTATGACCGGATGTTGTCCCAGTGCCAGGACCTTAGTGATTG
GCTTGTGAGGACACAGTAGAAGCTTTCTAGACC
BS17255.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:11:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13984-PA | 303 | CG13984-RA | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:09:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13984-RA | 657 | CG13984-RA | 49..351 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6308867..6309169 | 17..319 | 1515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:09:41 has no hits.
BS17255.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:01 Download gff for
BS17255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-PA | 1..303 | 17..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:17:04 Download gff for
BS17255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 49..354 | 17..325 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:22:39 Download gff for
BS17255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 49..354 | 17..325 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:22:39 Download gff for
BS17255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6308867..6309172 | 17..325 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:17:04 Download gff for
BS17255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6308867..6309172 | 17..325 | 99 | | Plus |
BS17255.3prime Sequence
333 bp (333 high quality bases) assembled on 2007-05-15
> BS17255.3prime
ATGGTCTAGAAAGCTTCTACTGTGTCCTCACAAGCCAATCACTAAGGTCC
TGGCACTGGGACAACATCCGGTCATACCCATACTCCCCATGCATGTCCAG
GTCGAGATCATCGTACTTATCATCGTTGTCACATGCCGTGGCTTTGGCGC
CCAGGCCAATTGCTGCCTTGTAGACAACGAATGTGATCAGGCTCATTATC
CAGCCGCAGACGACGCCGAAGGCAATGCAAGTGGCCACCTGGATCGGTGC
TCCATAGTCGAAGAGTAGGTGGTAGTGGAAAATGGTCAGCTCATTCTGCA
AATAGTGCTGATACTCCATGTCGACTGATAACT
BS17255.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:18:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13984-PA | 303 | CG13984-RA | 1..303 | 319..17 | 1515 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:29:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13984-RA | 657 | CG13984-RA | 49..351 | 319..17 | 1515 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:29:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6308867..6309169 | 319..17 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 02:29:20 has no hits.
BS17255.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:18:38 Download gff for
BS17255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-PA | 1..303 | 17..319 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:00:41 Download gff for
BS17255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 49..354 | 11..319 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:58:38 Download gff for
BS17255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 49..354 | 11..319 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 04:58:38 Download gff for
BS17255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6308867..6309172 | 11..319 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:00:41 Download gff for
BS17255.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6308867..6309172 | 11..319 | 99 | | Minus |
BS17255.pep Sequence
Translation from 16 to 318
> BS17255.pep
MEYQHYLQNELTIFHYHLLFDYGAPIQVATCIAFGVVCGWIMSLITFVVY
KAAIGLGAKATACDNDDKYDDLDLDMHGEYGYDRMLSQCQDLSDWLVRTQ
*
BS17255.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:54:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13984-PA | 100 | CG13984-PA | 1..100 | 1..100 | 548 | 100 | Plus |
