Clone Sequence Records
BS17261.complete Sequence
431 bp assembled on 2010-02-09
GenBank Submission: KX801493
> BS17261.complete
GAAGTTATCAGTCGACATGGTCAAGCATCTGGACAATGGACTTGTGTTCT
ACCGACTGATGCTGAGCTTTCCGCTAAGAATTGCACTGTATGCGGTGTAC
GTTTACCTGGAGAATTTGCTGGGGCTGATGCTTTTGATCCAGGAAGTTCT
GGTCCTTCAATTTCTATTCCTCTGCATGGTCATCCGGTGGGTATACCCAC
CGTGGCCAGCAAATGGTATCGCTTCATCGCTGAGGTTTCGCACACGGAAA
GCCCTCCAGATCTTCCTGACCATCTGGATCGTATTGCTCAACACGACCAC
CTATACGTGGAGCATCCCATGCCAGGGCATCATGCAACTCAGCCGACTAT
TCCGGATATGCGCCTATAGTCGCACCTGGATCATGATACAGCGCCACAAT
GGCGCCCGACGCTGAAAGCTTTCTAGACCAT
BS17261.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:59:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-RA | 399 | CG14370-PA | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-RA | 729 | CG14370-RA | 191..591 | 17..417 | 2005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13588187..13588587 | 17..417 | 2005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:59:10 has no hits.
BS17261.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:27 Download gff for
BS17261.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 17..415 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:53 Download gff for
BS17261.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..398 | 17..414 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:04 Download gff for
BS17261.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 191..588 | 17..414 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:27 Download gff for
BS17261.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 17..415 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:07 Download gff for
BS17261.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 191..588 | 17..414 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:07 Download gff for
BS17261.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13588187..13588584 | 17..414 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:04 Download gff for
BS17261.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9413909..9414306 | 17..414 | 100 | | Plus |
BS17261.5prime Sequence
429 bp (429 high quality bases) assembled on 2007-05-15
> BS17261.5prime
GAAGTTATCAGTCGACATGGTCAAGCATCTGGACAATGGACTTGTGTTCT
ACCGACTGATGCTGAGCTTTCCGCTAAGAATTGCACTGTATGCGGTGTAC
GTTTACCTGGAGAATTTGCTGGGGCTGATGCTTTTGATCCAGGAAGTTCT
GGTCCTTCAATTTCTATTCCTCTGCATGGTCATCCGGTGGGTATACCCAC
CGTGGCCAGCAAATGGTATCGCTTCATCGCTGAGGTTTCGCACACGGAAA
GCCCTCCAGATCTTCCTGACCATCTGGATCGTATTGCTCAACACGACCAC
CTATACGTGGAGCATCCCATGCCAGGGCATCATGCAACTCAGCCGACTAT
TCCGGATATGCGCCTATAGTCGCACCTGGATCATGATACAGCGCCACAAT
GGCGCCCGACGCTGAAAGCTTTCTAGACC
BS17261.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-PA | 399 | CG14370-RA | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:24:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-RA | 729 | CG14370-RA | 191..591 | 17..417 | 2005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:24:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13588187..13588587 | 17..417 | 2005 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:24:45 has no hits.
BS17261.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:25 Download gff for
BS17261.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-PA | 1..399 | 17..415 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:59:51 Download gff for
BS17261.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 185..595 | 11..421 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:11:08 Download gff for
BS17261.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 185..595 | 11..421 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:11:08 Download gff for
BS17261.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13588181..13588591 | 11..421 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:59:51 Download gff for
BS17261.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9413903..9414313 | 11..421 | 98 | | Plus |
BS17261.3prime Sequence
429 bp (429 high quality bases) assembled on 2007-05-15
> BS17261.3prime
ATGGTCTAGAAAGCTTTCAGCGTCGGGCGCCATTGTGGCGCTGTATCATG
ATCCAGGTGCGACTATAGGCGCATATCCGGAATAGTCGGCTGAGTTGCAT
GATGCCCTGGCATGGGATGCTCCACGTATAGGTGGTCGTGTTGAGCAATA
CGATCCAGATGGTCAGGAAGATCTGGAGGGCTTTCCGTGTGCGAAACCTC
AGCGATGAAGCGATACCATTTGCTGGCCACGGTGGGTATACCCACCGGAT
GACCATGCAGAGGAATAGAAATTGAAGGACCAGAACTTCCTGGATCAAAA
GCATCAGCCCCAGCAAATTCTCCAGGTAAACGTACACCGCATACAGTGCA
ATTCTTAGCGGAAAGCTCAGCATCAGTCGGTAGAACACAAGTCCATTGTC
CAGATGCTTGACCATGTCGACTGATAACT
BS17261.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:18:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-PA | 399 | CG14370-RA | 1..399 | 415..17 | 1995 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:28:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-RA | 729 | CG14370-RA | 191..591 | 415..15 | 2005 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:28:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13588187..13588587 | 415..15 | 2005 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:28:22 has no hits.
BS17261.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:19:00 Download gff for
BS17261.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-PA | 1..399 | 17..415 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:16:57 Download gff for
BS17261.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 185..595 | 11..421 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:54:05 Download gff for
BS17261.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 185..595 | 11..421 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:54:05 Download gff for
BS17261.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13588181..13588591 | 11..421 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:16:57 Download gff for
BS17261.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9413903..9414313 | 11..421 | 98 | | Minus |
BS17261.pep Sequence
Translation from 16 to 414
> BS17261.pep
MVKHLDNGLVFYRLMLSFPLRIALYAVYVYLENLLGLMLLIQEVLVLQFL
FLCMVIRWVYPPWPANGIASSLRFRTRKALQIFLTIWIVLLNTTTYTWSI
PCQGIMQLSRLFRICAYSRTWIMIQRHNGARR*
BS17261.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-PA | 132 | CG14370-PA | 1..132 | 1..132 | 693 | 100 | Plus |