Clone BS17263 Report

Search the DGRC for BS17263

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:172
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG14759-RA
Protein status:BS17263.pep: full length peptide match
Sequenced Size:413

Clone Sequence Records

BS17263.complete Sequence

413 bp assembled on 2010-02-09

GenBank Submission: KX806365

> BS17263.complete
GAAGTTATCAGTCGACATGTTCACCGGTCGGCTTCTCATCGGGTCCCCGA
TATTCGAGGCTAAGATGCGGCTACAGCAGAGGCGACGAATGTCAGAGCAC
AGGCTTCCGTACCATCGCAGACCTGCGCCCGTAAAGCTCCAGGACCGTAA
GAGTTCATGGACCGATCTAAAAAGGCCGCCCTTCCTGCTGGTCAAGAGCT
TCCTCAACTTGCGCCACATGGACGCCGACTACGGGAAGGACATGACACGA
GTTACGGACGAGCTAAGTTTCCAGCCCCACCGCACCCTCTTAATCAATAC
CGTGCGAGGGCCGCATCGTCAGTTTTCGGACACGGAACCAATTGCGGACA
TGATGGATAAAAGTCCGGTAGCTTTGGACTCGGATTCGAAGCCGTGAAAG
CTTTCTAGACCAT

BS17263.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:59:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14759-RB 381 CG14759-PB 1..381 17..397 1905 100 Plus
CG14759-RA 381 CG14759-PA 1..381 17..397 1905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14759-RB 557 CG14759-RB 110..490 17..397 1905 100 Plus
CG14759-RA 643 CG14759-RA 196..576 17..397 1905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8260036..8260416 17..397 1905 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:59:06 has no hits.

BS17263.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:26 Download gff for BS17263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 1..381 17..397 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:50 Download gff for BS17263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 6..380 22..396 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:02 Download gff for BS17263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 201..575 22..396 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:26 Download gff for BS17263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 1..381 17..397 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:06 Download gff for BS17263.complete
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 201..575 22..396 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:06 Download gff for BS17263.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8260041..8260415 22..396 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:02 Download gff for BS17263.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4147546..4147920 22..396 100   Plus

BS17263.5prime Sequence

411 bp (411 high quality bases) assembled on 2007-05-15

> BS17263.5prime
GAAGTTATCAGTCGACATGTTCACCGGTCGGCTTCTCATCGGGTCCCCGA
TATTCGAGGCTAAGATGCGGCTACAGCAGAGGCGACGAATGTCAGAGCAC
AGGCTTCCGTACCATCGCAGACCTGCGCCCGTAAAGCTCCAGGACCGTAA
GAGTTCATGGACCGATCTAAAAAGGCCGCCCTTCCTGCTGGTCAAGAGCT
TCCTCAACTTGCGCCACATGGACGCCGACTACGGGAAGGACATGACACGA
GTTACGGACGAGCTAAGTTTCCAGCCCCACCGCACCCTCTTAATCAATAC
CGTGCGAGGGCCGCATCGTCAGTTTTCGGACACGGAACCAATTGCGGACA
TGATGGATAAAAGTCCGGTAGCTTTGGACTCGGATTCGAAGCCGTGAAAG
CTTTCTAGACC

BS17263.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14759-PA 381 CG14759-RA 1..381 17..397 1905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:28:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14759-RB 557 CG14759-RB 110..490 17..397 1905 100 Plus
CG14759-RA 643 CG14759-RA 196..576 17..397 1905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:28:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8260036..8260416 17..397 1905 100 Plus
Blast to na_te.dros performed on 2015-02-13 02:28:53 has no hits.

BS17263.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:43 Download gff for BS17263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-PA 1..381 17..397 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:46:55 Download gff for BS17263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 192..576 9..397 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:25:44 Download gff for BS17263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 192..576 9..397 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:25:44 Download gff for BS17263.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8260032..8260416 9..397 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:46:55 Download gff for BS17263.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4147537..4147921 9..397 98   Plus

BS17263.3prime Sequence

411 bp (411 high quality bases) assembled on 2007-05-15

> BS17263.3prime
ATGGTCTAGAAAGCTTTCACGGCTTCGAATCCGAGTCCAAAGCTACCGGA
CTTTTATCCATCATGTCCGCAATTGGTTCCGTGTCCGAAAACTGACGATG
CGGCCCTCGCACGGTATTGATTAAGAGGGTGCGGTGGGGCTGGAAACTTA
GCTCGTCCGTAACTCGTGTCATGTCCTTCCCGTAGTCGGCGTCCATGTGG
CGCAAGTTGAGGAAGCTCTTGACCAGCAGGAAGGGCGGCCTTTTTAGATC
GGTCCATGAACTCTTACGGTCCTGGAGCTTTACGGGCGCAGGTCTGCGAT
GGTACGGAAGCCTGTGCTCTGACATTCGTCGCCTCTGCTGTAGCCGCATC
TTAGCCTCGAATATCGGGGACCCGATGAGAAGCCGACCGGTGAACATGTC
GACTGATAACT

BS17263.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14759-PA 381 CG14759-RA 1..381 397..17 1905 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:13:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14759-RB 557 CG14759-RB 110..490 397..17 1905 100 Minus
CG14759-RA 643 CG14759-RA 196..576 397..17 1905 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:13:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8260036..8260416 397..17 1905 100 Minus
Blast to na_te.dros performed on 2015-02-04 21:13:21 has no hits.

BS17263.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:19:20 Download gff for BS17263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-PA 1..381 17..397 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:30:36 Download gff for BS17263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 192..576 17..405 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:56:01 Download gff for BS17263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 192..576 17..405 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:56:01 Download gff for BS17263.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8260032..8260416 17..405 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:30:36 Download gff for BS17263.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4147537..4147921 17..405 98   Minus

BS17263.pep Sequence

Translation from 16 to 396

> BS17263.pep
MFTGRLLIGSPIFEAKMRLQQRRRMSEHRLPYHRRPAPVKLQDRKSSWTD
LKRPPFLLVKSFLNLRHMDADYGKDMTRVTDELSFQPHRTLLINTVRGPH
RQFSDTEPIADMMDKSPVALDSDSKP*

BS17263.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14759-PB 126 CG14759-PB 1..126 1..126 662 100 Plus
CG14759-PA 126 CG14759-PA 1..126 1..126 662 100 Plus