Clone Sequence Records
BS17263.complete Sequence
413 bp assembled on 2010-02-09
GenBank Submission: KX806365
> BS17263.complete
GAAGTTATCAGTCGACATGTTCACCGGTCGGCTTCTCATCGGGTCCCCGA
TATTCGAGGCTAAGATGCGGCTACAGCAGAGGCGACGAATGTCAGAGCAC
AGGCTTCCGTACCATCGCAGACCTGCGCCCGTAAAGCTCCAGGACCGTAA
GAGTTCATGGACCGATCTAAAAAGGCCGCCCTTCCTGCTGGTCAAGAGCT
TCCTCAACTTGCGCCACATGGACGCCGACTACGGGAAGGACATGACACGA
GTTACGGACGAGCTAAGTTTCCAGCCCCACCGCACCCTCTTAATCAATAC
CGTGCGAGGGCCGCATCGTCAGTTTTCGGACACGGAACCAATTGCGGACA
TGATGGATAAAAGTCCGGTAGCTTTGGACTCGGATTCGAAGCCGTGAAAG
CTTTCTAGACCAT
BS17263.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:59:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-RB | 381 | CG14759-PB | 1..381 | 17..397 | 1905 | 100 | Plus |
CG14759-RA | 381 | CG14759-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-RB | 557 | CG14759-RB | 110..490 | 17..397 | 1905 | 100 | Plus |
CG14759-RA | 643 | CG14759-RA | 196..576 | 17..397 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260036..8260416 | 17..397 | 1905 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:59:06 has no hits.
BS17263.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:26 Download gff for
BS17263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 1..381 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:50 Download gff for
BS17263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 6..380 | 22..396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:02 Download gff for
BS17263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 201..575 | 22..396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:26 Download gff for
BS17263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 1..381 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:06 Download gff for
BS17263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 201..575 | 22..396 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:06 Download gff for
BS17263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260041..8260415 | 22..396 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:02 Download gff for
BS17263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4147546..4147920 | 22..396 | 100 | | Plus |
BS17263.5prime Sequence
411 bp (411 high quality bases) assembled on 2007-05-15
> BS17263.5prime
GAAGTTATCAGTCGACATGTTCACCGGTCGGCTTCTCATCGGGTCCCCGA
TATTCGAGGCTAAGATGCGGCTACAGCAGAGGCGACGAATGTCAGAGCAC
AGGCTTCCGTACCATCGCAGACCTGCGCCCGTAAAGCTCCAGGACCGTAA
GAGTTCATGGACCGATCTAAAAAGGCCGCCCTTCCTGCTGGTCAAGAGCT
TCCTCAACTTGCGCCACATGGACGCCGACTACGGGAAGGACATGACACGA
GTTACGGACGAGCTAAGTTTCCAGCCCCACCGCACCCTCTTAATCAATAC
CGTGCGAGGGCCGCATCGTCAGTTTTCGGACACGGAACCAATTGCGGACA
TGATGGATAAAAGTCCGGTAGCTTTGGACTCGGATTCGAAGCCGTGAAAG
CTTTCTAGACC
BS17263.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-PA | 381 | CG14759-RA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:28:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-RB | 557 | CG14759-RB | 110..490 | 17..397 | 1905 | 100 | Plus |
CG14759-RA | 643 | CG14759-RA | 196..576 | 17..397 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:28:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260036..8260416 | 17..397 | 1905 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 02:28:53 has no hits.
BS17263.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:43 Download gff for
BS17263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-PA | 1..381 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:46:55 Download gff for
BS17263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 192..576 | 9..397 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:25:44 Download gff for
BS17263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 192..576 | 9..397 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:25:44 Download gff for
BS17263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260032..8260416 | 9..397 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:46:55 Download gff for
BS17263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4147537..4147921 | 9..397 | 98 | | Plus |
BS17263.3prime Sequence
411 bp (411 high quality bases) assembled on 2007-05-15
> BS17263.3prime
ATGGTCTAGAAAGCTTTCACGGCTTCGAATCCGAGTCCAAAGCTACCGGA
CTTTTATCCATCATGTCCGCAATTGGTTCCGTGTCCGAAAACTGACGATG
CGGCCCTCGCACGGTATTGATTAAGAGGGTGCGGTGGGGCTGGAAACTTA
GCTCGTCCGTAACTCGTGTCATGTCCTTCCCGTAGTCGGCGTCCATGTGG
CGCAAGTTGAGGAAGCTCTTGACCAGCAGGAAGGGCGGCCTTTTTAGATC
GGTCCATGAACTCTTACGGTCCTGGAGCTTTACGGGCGCAGGTCTGCGAT
GGTACGGAAGCCTGTGCTCTGACATTCGTCGCCTCTGCTGTAGCCGCATC
TTAGCCTCGAATATCGGGGACCCGATGAGAAGCCGACCGGTGAACATGTC
GACTGATAACT
BS17263.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:19:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-PA | 381 | CG14759-RA | 1..381 | 397..17 | 1905 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:13:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-RB | 557 | CG14759-RB | 110..490 | 397..17 | 1905 | 100 | Minus |
CG14759-RA | 643 | CG14759-RA | 196..576 | 397..17 | 1905 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:13:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260036..8260416 | 397..17 | 1905 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 21:13:21 has no hits.
BS17263.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:19:20 Download gff for
BS17263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-PA | 1..381 | 17..397 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:30:36 Download gff for
BS17263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 192..576 | 17..405 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:56:01 Download gff for
BS17263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 192..576 | 17..405 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:56:01 Download gff for
BS17263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260032..8260416 | 17..405 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:30:36 Download gff for
BS17263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4147537..4147921 | 17..405 | 98 | | Minus |
BS17263.pep Sequence
Translation from 16 to 396
> BS17263.pep
MFTGRLLIGSPIFEAKMRLQQRRRMSEHRLPYHRRPAPVKLQDRKSSWTD
LKRPPFLLVKSFLNLRHMDADYGKDMTRVTDELSFQPHRTLLINTVRGPH
RQFSDTEPIADMMDKSPVALDSDSKP*
BS17263.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-PB | 126 | CG14759-PB | 1..126 | 1..126 | 662 | 100 | Plus |
CG14759-PA | 126 | CG14759-PA | 1..126 | 1..126 | 662 | 100 | Plus |