Clone Sequence Records
BS17264.complete Sequence
428 bp assembled on 2010-02-09
GenBank Submission: KX804450
> BS17264.complete
GAAGTTATCAGTCGACATGTCTCATGGCGAGCGAAAAGGCCGCCTCAATG
TGGTCAAGTTTCTCGAACTGGGTTTTGCGGTAGCGTGTCTGGTGCTCCAC
TTCTACAGCTTCAACGATCGCGATATAATGACTTCGTTCCTGGCCACTGG
CACCTTCACGGGCTACATCATAGTGGTCATCGGGGTCTTTGCAGGCGTTC
TGATGCGGGCACCCATTCACAAGCGCATCGATATATTCTTCAGCGTCCTG
GGCTGCACCTTGTTCGTGGCCAGCGGTGTGTTCATCATTGAGGCCTGGGA
GTTCTCCTTCCGCACCCGAACTCGGGATCTCGCGCTCATCAAGGCCTCGC
TGTCCATCGTCAATGGGGTGCTATTCGGATTCGATGCGGTGTTCACATTT
CGCGACAAGTGAAAGCTTTCTAGACCAT
BS17264.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:59:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15449-RA | 396 | CG15449-PA | 1..396 | 17..412 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15449-RA | 765 | CG15449-RA | 168..564 | 17..413 | 1985 | 100 | Plus |
| Ntf-2-RE | 3078 | CG1740-RE | 1394..1618 | 413..189 | 1125 | 100 | Minus |
| Ntf-2-RE | 3078 | CG1740-RE | 1646..1771 | 195..70 | 630 | 100 | Minus |
| Ntf-2-RE | 3078 | CG1740-RE | 1995..2049 | 71..17 | 275 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21039715..21039939 | 413..189 | 1125 | 100 | Minus |
| X | 23542271 | X | 21040035..21040160 | 195..70 | 630 | 100 | Minus |
| X | 23542271 | X | 21040384..21040438 | 71..17 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:59:19 has no hits.
BS17264.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:21 Download gff for
BS17264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 1..396 | 17..412 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:56 Download gff for
BS17264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 1..395 | 17..411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:09 Download gff for
BS17264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 168..562 | 17..411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:21 Download gff for
BS17264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 1..396 | 17..412 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:10 Download gff for
BS17264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 168..562 | 17..411 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:10 Download gff for
BS17264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21039717..21039933 | 195..411 | 100 | <- | Minus |
| X | 21040036..21040159 | 71..194 | 100 | <- | Minus |
| X | 21040385..21040438 | 17..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:09 Download gff for
BS17264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20910744..20910960 | 195..411 | 100 | <- | Minus |
| arm_X | 20911063..20911186 | 71..194 | 100 | <- | Minus |
| arm_X | 20911412..20911465 | 17..70 | 100 | | Minus |
BS17264.3prime Sequence
426 bp (426 high quality bases) assembled on 2007-05-15
> BS17264.3prime
ATGGTCTAGAAAGCTTTCACTTGTCGCGAAATGTGAACACCGCATCGAAT
CCGAATAGCACCCCATTGACGATGGACAGCGAGGCCTTGATGAGCGCGAG
ATCCCGAGTTCGGGTGCGGAAGGAGAACTCCCAGGCCTCAATGATGAACA
CACCGCTGGCCACGAACAAGGTGCAGCCCAGGACGCTGAAGAATATATCG
ATGCGCTTGTGAATGGGTGCCCGCATCAGAACGCCTGCAAAGACCCCGAT
GACCACTATGATGTAGCCCGTGAAGGTGCCAGTGGCCAGGAACGAAGTCA
TTATATCGCGATCGTTGAAGCTGTAGAAGTGGAGCACCAGACACGCTACC
GCAAAACCCAGTTCGAGAAACTTGACCACATTGAGGCGGCCTTTTCGCTC
GCCATGAGACATGTCGACTGATAACT
BS17264.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:22:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15449-PA | 396 | CG15449-RA | 1..396 | 412..17 | 1980 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:31:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15449-RA | 765 | CG15449-RA | 168..564 | 412..16 | 1985 | 100 | Minus |
| Ntf-2-RE | 3078 | CG1740-RE | 1394..1618 | 16..240 | 1125 | 100 | Plus |
| Ntf-2-RE | 3078 | CG1740-RE | 1646..1771 | 234..359 | 630 | 100 | Plus |
| Ntf-2-RE | 3078 | CG1740-RE | 1995..2049 | 358..412 | 275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:31:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21039715..21039939 | 16..240 | 1125 | 100 | Plus |
| X | 23542271 | X | 21040035..21040160 | 234..359 | 630 | 100 | Plus |
| X | 23542271 | X | 21040384..21040438 | 358..412 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:31:28 has no hits.
BS17264.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:22:33 Download gff for
BS17264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-PA | 1..396 | 17..412 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:18:44 Download gff for
BS17264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 161..572 | 6..421 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:37:05 Download gff for
BS17264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 161..572 | 6..421 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:37:05 Download gff for
BS17264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21039707..21039933 | 6..234 | 98 | <- | Plus |
| X | 21040036..21040159 | 235..358 | 100 | <- | Plus |
| X | 21040385..21040445 | 359..421 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:18:44 Download gff for
BS17264.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20910734..20910960 | 6..234 | 98 | <- | Plus |
| arm_X | 20911063..20911186 | 235..358 | 100 | <- | Plus |
| arm_X | 20911412..20911472 | 359..421 | 93 | | Plus |
BS17264.5prime Sequence
426 bp (426 high quality bases) assembled on 2007-05-15
> BS17264.5prime
GAAGTTATCAGTCGACATGTCTCATGGCGAGCGAAAAGGCCGCCTCAATG
TGGTCAAGTTTCTCGAACTGGGTTTTGCGGTAGCGTGTCTGGTGCTCCAC
TTCTACAGCTTCAACGATCGCGATATAATGACTTCGTTCCTGGCCACTGG
CACCTTCACGGGCTACATCATAGTGGTCATCGGGGTCTTTGCAGGCGTTC
TGATGCGGGCACCCATTCACAAGCGCATCGATATATTCTTCAGCGTCCTG
GGCTGCACCTTGTTCGTGGCCAGCGGTGTGTTCATCATTGAGGCCTGGGA
GTTCTCCTTCCGCACCCGAACTCGGGATCTCGCGCTCATCAAGGCCTCGC
TGTCCATCGTCAATGGGGTGCTATTCGGATTCGATGCGGTGTTCACATTT
CGCGACAAGTGAAAGCTTTCTAGACC
BS17264.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:15:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15449-PA | 396 | CG15449-RA | 1..396 | 17..412 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:35:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15449-RA | 765 | CG15449-RA | 168..564 | 17..413 | 1985 | 100 | Plus |
| Ntf-2-RE | 3078 | CG1740-RE | 1394..1618 | 413..189 | 1125 | 100 | Minus |
| Ntf-2-RE | 3078 | CG1740-RE | 1646..1771 | 195..70 | 630 | 100 | Minus |
| Ntf-2-RE | 3078 | CG1740-RE | 1995..2049 | 71..17 | 275 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21039715..21039939 | 413..189 | 1125 | 100 | Minus |
| X | 23542271 | X | 21040035..21040160 | 195..70 | 630 | 100 | Minus |
| X | 23542271 | X | 21040384..21040438 | 71..17 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 23:35:31 has no hits.
BS17264.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:15:36 Download gff for
BS17264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-PA | 1..396 | 17..412 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:47:56 Download gff for
BS17264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 161..572 | 8..423 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:12:30 Download gff for
BS17264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15449-RA | 161..572 | 8..423 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:12:30 Download gff for
BS17264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21039707..21039933 | 195..423 | 98 | <- | Minus |
| X | 21040036..21040159 | 71..194 | 100 | <- | Minus |
| X | 21040385..21040445 | 8..70 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:47:56 Download gff for
BS17264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20910734..20910960 | 195..423 | 98 | <- | Minus |
| arm_X | 20911063..20911186 | 71..194 | 100 | <- | Minus |
| arm_X | 20911412..20911472 | 8..70 | 93 | | Minus |
BS17264.pep Sequence
Translation from 16 to 411
> BS17264.pep
MSHGERKGRLNVVKFLELGFAVACLVLHFYSFNDRDIMTSFLATGTFTGY
IIVVIGVFAGVLMRAPIHKRIDIFFSVLGCTLFVASGVFIIEAWEFSFRT
RTRDLALIKASLSIVNGVLFGFDAVFTFRDK*
BS17264.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15449-PA | 131 | CG15449-PA | 1..131 | 1..131 | 665 | 100 | Plus |
| CG44325-PD | 146 | CG44325-PD | 8..126 | 12..131 | 159 | 31.4 | Plus |
| CG44325-PE | 125 | CG44325-PE | 8..120 | 12..125 | 158 | 32.2 | Plus |
| CG44325-PB | 125 | CG44325-PB | 8..120 | 12..125 | 158 | 32.2 | Plus |
