Clone Sequence Records
BS17265.complete Sequence
431 bp assembled on 2010-02-09
GenBank Submission: KX802550
> BS17265.complete
GAAGTTATCAGTCGACATGAGCGTGATCAAGTCCATATTTCTGCTCAGTA
TTTTGGCTGTCTGCCTCATTCCCCGGGAGACGGAGGCCCAGGCCACTATA
AGTGAAAGCTGGGGAAGGCTGGGCAAGTGTACTCAGGTGGCCATCGAAAC
ACTGACCAGCCTGGCCGATAAAATCGTCCCGACCGTATATGAGTTGAAAC
AATGCTCCGGATACGTAACTTTGGAACCGGCAAACGGCAAAGACAGAAAG
ATTACCTGGTACCTAAAGGTATCCTATGAATTCTTCAAGAAACTTGTCTT
TGACGAACCCAAATGTCTGCACGGTCTACTGAACAAGTTGGCTGCCACAA
TCAAACCATTTGCCGAGCAGATATCGGGATTAGGTTGCTTGGACGAAGAA
GATTATATCATTTAAAAGCTTTCTAGACCAT
BS17265.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:59:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp53C14b-RB | 399 | CG15616-PB | 1..399 | 17..415 | 1995 | 100 | Plus |
| Acp53C14b-RA | 399 | CG15616-PA | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp53C14b-RB | 590 | CG15616-RB | 40..440 | 17..417 | 2005 | 100 | Plus |
| Acp53C14b-RA | 499 | CG15616-RA | 40..440 | 17..417 | 2005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16748965..16749323 | 417..59 | 1795 | 100 | Minus |
| 2R | 25286936 | 2R | 16749378..16749421 | 60..17 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:59:28 has no hits.
BS17265.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:21:01 Download gff for
BS17265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 1..399 | 17..415 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:59 Download gff for
BS17265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 27..423 | 17..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:13 Download gff for
BS17265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 27..423 | 17..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:21:01 Download gff for
BS17265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 20..427 | 9..417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:15 Download gff for
BS17265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 40..436 | 17..413 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:15 Download gff for
BS17265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16748969..16749323 | 59..413 | 100 | <- | Minus |
| 2R | 16749380..16749421 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:13 Download gff for
BS17265.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12636474..12636828 | 59..413 | 100 | <- | Minus |
| arm_2R | 12636885..12636926 | 17..58 | 100 | | Minus |
BS17265.5prime Sequence
429 bp (429 high quality bases) assembled on 2007-05-15
> BS17265.5prime
GAAGTTATCAGTCGACATGAGCGTGATCAAGTCCATATTTCTGCTCAGTA
TTTTGGCTGTCTGCCTCATTCCCCGGGAGACGGAGGCCCAGGCCACTATA
AGTGAAAGCTGGGGAAGGCTGGGCAAGTGTACTCAGGTGGCCATCGAAAC
ACTGACCAGCCTGGCCGATAAAATCGTCCCGACCGTATATGAGTTGAAAC
AATGCTCCGGATACGTAACTTTGGAACCGGCAAACGGCAAAGACAGAAAG
ATTACCTGGTACCTAAAGGTATCCTATGAATTCTTCAAGAAACTTGTCTT
TGACGAACCCAAATGTCTGCACGGTCTACTGAACAAGTTGGCTGCCACAA
TCAAACCATTTGCCGAGCAGATATCGGGATTAGGTTGCTTGGACGAAGAA
GATTATATCATTTAAAAGCTTTCTAGACC
BS17265.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:15:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15616-PA | 399 | Acp53C14b-RA | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:14:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp53C14b-RB | 590 | CG15616-RB | 40..440 | 17..417 | 2005 | 100 | Plus |
| Acp53C14b-RA | 499 | CG15616-RA | 40..440 | 17..417 | 2005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:14:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16748965..16749323 | 417..59 | 1795 | 100 | Minus |
| 2R | 25286936 | 2R | 16749378..16749421 | 60..17 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:14:25 has no hits.
BS17265.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:15:45 Download gff for
BS17265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15616-PA | 1..399 | 17..415 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:33:01 Download gff for
BS17265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 20..427 | 9..417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:27:00 Download gff for
BS17265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 33..440 | 9..417 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:27:00 Download gff for
BS17265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16748965..16749323 | 59..417 | 100 | <- | Minus |
| 2R | 16749380..16749428 | 9..58 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:33:01 Download gff for
BS17265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12636470..12636828 | 59..417 | 100 | <- | Minus |
| arm_2R | 12636885..12636933 | 9..58 | 94 | | Minus |
BS17265.3prime Sequence
429 bp (429 high quality bases) assembled on 2007-05-15
> BS17265.3prime
ATGGTCTAGAAAGCTTTTAAATGATATAATCTTCTTCGTCCAAGCAACCT
AATCCCGATATCTGCTCGGCAAATGGTTTGATTGTGGCAGCCAACTTGTT
CAGTAGACCGTGCAGACATTTGGGTTCGTCAAAGACAAGTTTCTTGAAGA
ATTCATAGGATACCTTTAGGTACCAGGTAATCTTTCTGTCTTTGCCGTTT
GCCGGTTCCAAAGTTACGTATCCGGAGCATTGTTTCAACTCATATACGGT
CGGGACGATTTTATCGGCCAGGCTGGTCAGTGTTTCGATGGCCACCTGAG
TACACTTGCCCAGCCTTCCCCAGCTTTCACTTATAGTGGCCTGGGCCTCC
GTCTCCCGGGGAATGAGGCAGACAGCCAAAATACTGAGCAGAAATATGGA
CTTGATCACGCTCATGTCGACTGATAACT
BS17265.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:22:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15616-PA | 399 | Acp53C14b-RA | 1..399 | 415..17 | 1995 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp53C14b-RB | 590 | CG15616-RB | 40..440 | 415..15 | 2005 | 100 | Minus |
| Acp53C14b-RA | 499 | CG15616-RA | 40..440 | 415..15 | 2005 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:06:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16748965..16749323 | 15..373 | 1795 | 100 | Plus |
| 2R | 25286936 | 2R | 16749378..16749421 | 372..415 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:06:58 has no hits.
BS17265.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:22:42 Download gff for
BS17265.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15616-PA | 1..399 | 17..415 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:17:52 Download gff for
BS17265.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 20..427 | 15..423 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:53:40 Download gff for
BS17265.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 33..440 | 15..423 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:53:40 Download gff for
BS17265.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16748965..16749323 | 15..373 | 100 | <- | Plus |
| 2R | 16749380..16749428 | 374..423 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:17:52 Download gff for
BS17265.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12636470..12636828 | 15..373 | 100 | <- | Plus |
| arm_2R | 12636885..12636933 | 374..423 | 94 | | Plus |
BS17265.pep Sequence
Translation from 16 to 414
> BS17265.pep
MSVIKSIFLLSILAVCLIPRETEAQATISESWGRLGKCTQVAIETLTSLA
DKIVPTVYELKQCSGYVTLEPANGKDRKITWYLKVSYEFFKKLVFDEPKC
LHGLLNKLAATIKPFAEQISGLGCLDEEDYII*
BS17265.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp53C14b-PB | 132 | CG15616-PB | 1..132 | 1..132 | 679 | 100 | Plus |
| Acp53C14b-PA | 132 | CG15616-PA | 1..132 | 1..132 | 679 | 100 | Plus |
| Acp53C14a-PB | 121 | CG8626-PB | 1..121 | 1..127 | 136 | 26.8 | Plus |
| Acp53C14a-PA | 121 | CG8626-PA | 1..121 | 1..127 | 136 | 26.8 | Plus |
