Clone Sequence Records
BS17269.complete Sequence
401 bp assembled on 2010-02-09
GenBank Submission: KX800615
> BS17269.complete
GAAGTTATCAGTCGACATGATCAAGACCGCGCTAATCATTTCCCTGTTCC
TGGTGGCCGCCATCCGGGCTGCAGACGAATCTCAGGCCGAGACCACCAAG
TACCGCAACGAGATCAAGCCGGATGGCTCATACAGCTGGGAATACGGAAC
GTCCAACGGCATCGATGCCCAGGAGAGTGGAGTGGGTGGAGTCCAAGCTG
CCGGATCCGTGAGCTACGCTGCTCCCGATGGAACACCCATCCAGCTGGAG
TACACTGCCGATGAGAACGGATATCGTCCTACTGGTGCTCATCTGCCCAC
GCCGCCTCCCATTCCTGATTACATCCTCAAGGCTTTGGCCTACATCGAAG
CGCATCCATTCCAGAGGATTCAGCTGAAGAAGTAGAAGCTTTCTAGACCA
T
BS17269.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fb-RA | 369 | CG18348-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fb-RA | 457 | CG18348-RA | 19..387 | 17..385 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10894267..10894623 | 29..385 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:58:17 has no hits.
BS17269.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:08 Download gff for
BS17269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:32 Download gff for
BS17269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:40 Download gff for
BS17269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 19..387 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:09 Download gff for
BS17269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:49 Download gff for
BS17269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 19..387 | 17..385 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:49 Download gff for
BS17269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10894267..10894623 | 29..385 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:40 Download gff for
BS17269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10887367..10887723 | 29..385 | 100 | | Plus |
BS17269.3prime Sequence
399 bp (399 high quality bases) assembled on 2007-05-15
> BS17269.3prime
ATGGTCTAGAAAGCTTCTACTTCTTCAGCTGAATCCTCTGGAATGGATGC
GCTTCGATGTAGGCCAAAGCCTTGAGGATGTAATCAGGAATGGGAGGCGG
CGTGGGCAGATGAGCACCAGTAGGACGATATCCGTTCTCATCGGCAGTGT
ACTCCAGCTGGATGGGTGTTCCATCGGGAGCAGCGTAGCTCACGGATCCG
GCAGCTTGGACTCCACCCACTCCACTCTCCTGGGCATCGATGCCGTTGGA
CGTTCCGTATTCCCAGCTGTATGAGCCATCCGGCTTGATCTCGTTGCGGT
ACTTGGTGGTCTCGGCCTGAGATTCGTCTGCAGCCCGGATGGCGGCCACC
AGGAACAGGGAAATGATTAGCGCGGTCTTGATCATGTCGACTGATAACT
BS17269.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:19:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18348-PA | 369 | CG18348-RA | 1..369 | 385..17 | 1845 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:10:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fb-RA | 457 | CG18348-RA | 19..387 | 385..17 | 1845 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10894267..10894623 | 373..17 | 1785 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:10:07 has no hits.
BS17269.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:19:24 Download gff for
BS17269.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18348-PA | 1..369 | 17..385 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:29:49 Download gff for
BS17269.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 12..392 | 11..393 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:49:53 Download gff for
BS17269.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 12..392 | 11..393 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:49:53 Download gff for
BS17269.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10894267..10894628 | 11..373 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:29:49 Download gff for
BS17269.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10887367..10887728 | 11..373 | 99 | | Minus |
BS17269.5prime Sequence
399 bp (399 high quality bases) assembled on 2007-05-15
> BS17269.5prime
GAAGTTATCAGTCGACATGATCAAGACCGCGCTAATCATTTCCCTGTTCC
TGGTGGCCGCCATCCGGGCTGCAGACGAATCTCAGGCCGAGACCACCAAG
TACCGCAACGAGATCAAGCCGGATGGCTCATACAGCTGGGAATACGGAAC
GTCCAACGGCATCGATGCCCAGGAGAGTGGAGTGGGTGGAGTCCAAGCTG
CCGGATCCGTGAGCTACGCTGCTCCCGATGGAACACCCATCCAGCTGGAG
TACACTGCCGATGAGAACGGATATCGTCCTACTGGTGCTCATCTGCCCAC
GCCGCCTCCCATTCCTGATTACATCCTCAAGGCTTTGGCCTACATCGAAG
CGCATCCATTCCAGAGGATTCAGCTGAAGAAGTAGAAGCTTTCTAGACC
BS17269.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18348-PA | 369 | CG18348-RA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:30:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fb-RA | 457 | CG18348-RA | 19..387 | 17..385 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:30:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10894267..10894623 | 29..385 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:30:08 has no hits.
BS17269.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:12:47 Download gff for
BS17269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18348-PA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:49:25 Download gff for
BS17269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 12..392 | 9..391 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:11:34 Download gff for
BS17269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 12..392 | 9..391 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:11:34 Download gff for
BS17269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10894267..10894628 | 29..391 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:49:25 Download gff for
BS17269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10887367..10887728 | 29..391 | 99 | | Plus |
BS17269.pep Sequence
Translation from 16 to 384
> BS17269.pep
MIKTALIISLFLVAAIRAADESQAETTKYRNEIKPDGSYSWEYGTSNGID
AQESGVGGVQAAGSVSYAAPDGTPIQLEYTADENGYRPTGAHLPTPPPIP
DYILKALAYIEAHPFQRIQLKK*
BS17269.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fb-PA | 122 | CG18348-PA | 1..122 | 1..122 | 632 | 100 | Plus |
| Cpr65Ec-PA | 127 | CG8634-PA | 7..118 | 6..116 | 334 | 57.1 | Plus |
| Cpr67Fa2-PA | 134 | CG18349-PA | 1..131 | 1..122 | 297 | 48.1 | Plus |
| Cpr67Fa1-PA | 134 | CG7941-PA | 1..117 | 1..114 | 296 | 50.4 | Plus |
| Cpr65Eb-PA | 179 | CG8638-PA | 4..121 | 2..114 | 271 | 45.8 | Plus |
