Clone Sequence Records
BS17270.complete Sequence
416 bp assembled on 2010-02-09
GenBank Submission: KX804038
> BS17270.complete
GAAGTTATCAGTCGACATGTCTGACAAGGATAAGAAAGATAAACCGGAAC
AGTTGGATGATGATTCCAGTGACGACGATGCCAACCAGAGAGCAGTTCGA
GATCAGTATTCCGATCCTACCATCAGTGCATCCCCCTCGATTCTGCGACA
CCCCAACGCTCCCCGTCCTGATATTTCAAGTGCCCCCTCGGTTGTCATTG
CGTTGCCAAGTAGCGAGACCCTCGTCGTGACCGAGGAAACTCCGGAGGAG
CGACTCCGGCGAAGAATGAGGTTTCTCGAGTTGCGGCGTGAGCACTACAA
CTACGTCAGCCATAGCGAGCAATGCAACATGGCGGATACGGAGGATGAAG
ATCACACGGAGAATCACCCAAAGTGTGAAGCCAATTGCAAGCCGGAATAG
AAGCTTTCTAGACCAT
BS17270.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:59:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18666-RA | 384 | CG18666-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18666-RA | 514 | CG18666-RA | 58..442 | 17..401 | 1925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11034852..11035236 | 17..401 | 1925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:59:37 has no hits.
BS17270.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:22:02 Download gff for
BS17270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:00 Download gff for
BS17270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:18 Download gff for
BS17270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 58..441 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:22:02 Download gff for
BS17270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:17 Download gff for
BS17270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 58..441 | 17..400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:17 Download gff for
BS17270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11034852..11035235 | 17..400 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:18 Download gff for
BS17270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11034852..11035235 | 17..400 | 100 | | Plus |
BS17270.3prime Sequence
414 bp (414 high quality bases) assembled on 2007-05-15
> BS17270.3prime
ATGGTCTAGAAAGCTTCTATTCCGGCTTGCAATTGGCTTCACACTTTGGG
TGATTCTCCGTGTGATCTTCATCCTCCGTATCCGCCATGTTGCATTGCTC
GCTATGGCTGACGTAGTTGTAGTGCTCACGCCGCAACTCGAGAAACCTCA
TTCTTCGCCGGAGTCGCTCCTCCGGAGTTTCCTCGGTCACGACGAGGGTC
TCGCTACTTGGCAACGCAATGACAACCGAGGGGGCACTTGAAATATCAGG
ACGGGGAGCGTTGGGGTGTCGCAGAATCGAGGGGGATGCACTGATGGTAG
GATCGGAATACTGATCTCGAACTGCTCTCTGGTTGGCATCGTCGTCACTG
GAATCATCATCCAACTGTTCCGGTTTATCTTTCTTATCCTTGTCAGACAT
GTCGACTGATAACT
BS17270.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:22:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18666-PA | 384 | CG18666-RA | 1..384 | 400..17 | 1920 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:21:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18666-RA | 514 | CG18666-RA | 58..442 | 400..16 | 1925 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:21:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11034852..11035236 | 400..16 | 1925 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:21:13 has no hits.
BS17270.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:22:37 Download gff for
BS17270.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-PA | 1..384 | 17..400 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:49:49 Download gff for
BS17270.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 58..446 | 11..400 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:39:00 Download gff for
BS17270.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 58..446 | 11..400 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:39:00 Download gff for
BS17270.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11034852..11035240 | 11..400 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:49:49 Download gff for
BS17270.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11034852..11035240 | 11..400 | 99 | | Minus |
BS17270.5prime Sequence
414 bp (414 high quality bases) assembled on 2007-05-15
> BS17270.5prime
GAAGTTATCAGTCGACATGTCTGACAAGGATAAGAAAGATAAACCGGAAC
AGTTGGATGATGATTCCAGTGACGACGATGCCAACCAGAGAGCAGTTCGA
GATCAGTATTCCGATCCTACCATCAGTGCATCCCCCTCGATTCTGCGACA
CCCCAACGCTCCCCGTCCTGATATTTCAAGTGCCCCCTCGGTTGTCATTG
CGTTGCCAAGTAGCGAGACCCTCGTCGTGACCGAGGAAACTCCGGAGGAG
CGACTCCGGCGAAGAATGAGGTTTCTCGAGTTGCGGCGTGAGCACTACAA
CTACGTCAGCCATAGCGAGCAATGCAACATGGCGGATACGGAGGATGAAG
ATCACACGGAGAATCACCCAAAGTGTGAAGCCAATTGCAAGCCGGAATAG
AAGCTTTCTAGACC
BS17270.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:15:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18666-PA | 384 | CG18666-RA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18666-RA | 514 | CG18666-RA | 58..442 | 17..401 | 1925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11034852..11035236 | 17..401 | 1925 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:27:25 has no hits.
BS17270.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:15:40 Download gff for
BS17270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-PA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:00:23 Download gff for
BS17270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 58..446 | 17..406 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:21:28 Download gff for
BS17270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 58..446 | 17..406 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:21:28 Download gff for
BS17270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11034852..11035240 | 17..406 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:00:23 Download gff for
BS17270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11034852..11035240 | 17..406 | 99 | | Plus |
BS17270.pep Sequence
Translation from 16 to 399
> BS17270.pep
MSDKDKKDKPEQLDDDSSDDDANQRAVRDQYSDPTISASPSILRHPNAPR
PDISSAPSVVIALPSSETLVVTEETPEERLRRRMRFLELRREHYNYVSHS
EQCNMADTEDEDHTENHPKCEANCKPE*
BS17270.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18666-PA | 127 | CG18666-PA | 1..127 | 1..127 | 673 | 100 | Plus |
