Clone Sequence Records
BS17282.complete Sequence
413 bp assembled on 2010-02-09
GenBank Submission: KX801853
> BS17282.complete
GAAGTTATCAGTCGACATGTTCCGCCGCACTAATGCCGATCCGGTCATAC
GGCAATTTATTCTGCGCACTGCAGTCCTCAATTATCTTGGCAAGAGTCTG
CGAGAGCAGTATAATGAATATTGCCTTTTGAGAACCCAGCACGAAAATAT
TAGGCTGAAGACTGCGAGTGATCAAGAGCTTGAGGACCTGCCGACTCTTT
CCGAGCTATTTGAGATGCAACAGTTGAAGACGGCTGCCACCCATCGTCTG
CTGATGCGGGAGTACCAAGAATTGCTTGCCTACATGATGGACAAGAGTGA
TTTGTGGGACAGTCAGGAGTACTTCAAGGCCAAGTCTGCGCTTGGGGCGG
CCATCCACAATCTACGGGTTTGTGCACCCACCAAACCAATGGACTAAAAG
CTTTCTAGACCAT
BS17282.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:58:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14684-RA | 381 | CG14684-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14684-RA | 487 | CG14684-RA | 29..412 | 16..399 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10707002..10707385 | 16..399 | 1920 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:58:41 has no hits.
BS17282.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:15 Download gff for
BS17282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 1..381 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:41 Download gff for
BS17282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 35..408 | 22..395 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:51 Download gff for
BS17282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 35..408 | 22..395 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:15 Download gff for
BS17282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 29..422 | 16..409 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:57 Download gff for
BS17282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 35..408 | 22..395 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:57 Download gff for
BS17282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10707008..10707381 | 22..395 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:51 Download gff for
BS17282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6532730..6533103 | 22..395 | 100 | | Plus |
BS17282.3prime Sequence
411 bp (411 high quality bases) assembled on 2007-05-15
> BS17282.3prime
ATGGTCTAGAAAGCTTTTAGTCCATTGGTTTGGTGGGTGCACAAACCCGT
AGATTGTGGATGGCCGCCCCAAGCGCAGACTTGGCCTTGAAGTACTCCTG
ACTGTCCCACAAATCACTCTTGTCCATCATGTAGGCAAGCAATTCTTGGT
ACTCCCGCATCAGCAGACGATGGGTGGCAGCCGTCTTCAACTGTTGCATC
TCAAATAGCTCGGAAAGAGTCGGCAGGTCCTCAAGCTCTTGATCACTCGC
AGTCTTCAGCCTAATATTTTCGTGCTGGGTTCTCAAAAGGCAATATTCAT
TATACTGCTCTCGCAGACTCTTGCCAAGATAATTGAGGACTGCAGTGCGC
AGAATAAATTGCCGTATGACCGGATCGGCATTAGTGCGGCGGAACATGTC
GACTGATAACT
BS17282.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:23:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14684-PA | 381 | CG14684-RA | 1..381 | 397..17 | 1905 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:03:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14684-RA | 487 | CG14684-RA | 29..412 | 398..15 | 1920 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10707002..10707385 | 398..15 | 1920 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:03:11 has no hits.
BS17282.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:23:03 Download gff for
BS17282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-PA | 1..381 | 17..397 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:19:49 Download gff for
BS17282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 29..422 | 5..398 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:13:18 Download gff for
BS17282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 29..422 | 5..398 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:13:18 Download gff for
BS17282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10707002..10707395 | 5..398 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:19:49 Download gff for
BS17282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6532724..6533117 | 5..398 | 98 | | Minus |
BS17282.5prime Sequence
411 bp (411 high quality bases) assembled on 2007-05-15
> BS17282.5prime
GAAGTTATCAGTCGACATGTTCCGCCGCACTAATGCCGATCCGGTCATAC
GGCAATTTATTCTGCGCACTGCAGTCCTCAATTATCTTGGCAAGAGTCTG
CGAGAGCAGTATAATGAATATTGCCTTTTGAGAACCCAGCACGAAAATAT
TAGGCTGAAGACTGCGAGTGATCAAGAGCTTGAGGACCTGCCGACTCTTT
CCGAGCTATTTGAGATGCAACAGTTGAAGACGGCTGCCACCCATCGTCTG
CTGATGCGGGAGTACCAAGAATTGCTTGCCTACATGATGGACAAGAGTGA
TTTGTGGGACAGTCAGGAGTACTTCAAGGCCAAGTCTGCGCTTGGGGCGG
CCATCCACAATCTACGGGTTTGTGCACCCACCAAACCAATGGACTAAAAG
CTTTCTAGACC
BS17282.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:16:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14684-PA | 381 | CG14684-RA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:27:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14684-RA | 487 | CG14684-RA | 29..412 | 16..399 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:27:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10707002..10707385 | 16..399 | 1920 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:27:54 has no hits.
BS17282.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:16:03 Download gff for
BS17282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-PA | 1..381 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:00:29 Download gff for
BS17282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 29..422 | 16..409 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:23:31 Download gff for
BS17282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14684-RA | 29..422 | 16..409 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:23:31 Download gff for
BS17282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10707002..10707395 | 16..409 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:00:29 Download gff for
BS17282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6532724..6533117 | 16..409 | 98 | | Plus |
BS17282.pep Sequence
Translation from 16 to 396
> BS17282.pep
MFRRTNADPVIRQFILRTAVLNYLGKSLREQYNEYCLLRTQHENIRLKTA
SDQELEDLPTLSELFEMQQLKTAATHRLLMREYQELLAYMMDKSDLWDSQ
EYFKAKSALGAAIHNLRVCAPTKPMD*
BS17282.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14684-PA | 126 | CG14684-PA | 1..126 | 1..126 | 648 | 100 | Plus |