Clone Sequence Records
BS17294.complete Sequence
482 bp assembled on 2010-02-09
GenBank Submission: KX800757
> BS17294.complete
GAAGTTATCAGTCGACATGAACATGAGGGGAATGGCCAAGCGTTCTATTT
GGCTCCAATGTCTTCGGGAAAATGCCACCAATATGCGCCTGGAGCACGAG
GATCTGGGACGTCGCATTGCTGTTTCTTTGGCCAGTTCCCAGAAAGCTCT
AGTTGATATCGAAAACTTGAATCAAGAGCTGTTAAAAATGAAGGACACAA
TCCATAATGCCATTTCCAATGTTATGGGCTACGAAAAGAAGTGTTGTGAA
TTGCTCCTGGAAATTTTGATTAAAATAGTTGAGAACAACGACCTGGATGC
CGAACTAAATCCCAAAATGATCTCCAAGGCGTTTCTCGACTTGGATCCGA
GTTCCGACGAGACAGAAGTTCTGAATGACCGTAGTCTTGCAGCGTCTGAT
TTTAATCAGCAATATCCAAAAGATGTGCCGGATTCTATTGATATAAACAT
AACAGAAGACCAGTAAAAGCTTTCTAGACCAT
BS17294.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:01:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13476-RB | 450 | CG13476-PB | 1..450 | 17..466 | 2235 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13476-RB | 694 | CG13476-RB | 81..530 | 17..466 | 2235 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14705544..14705993 | 17..466 | 2235 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:01:01 has no hits.
BS17294.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:27 Download gff for
BS17294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 1..450 | 17..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:14 Download gff for
BS17294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 63..510 | 17..464 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:00 Download gff for
BS17294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 81..528 | 17..464 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:27 Download gff for
BS17294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 58..517 | 8..473 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:48 Download gff for
BS17294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 81..528 | 17..464 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:48 Download gff for
BS17294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14705544..14705991 | 17..464 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:00 Download gff for
BS17294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14698644..14699091 | 17..464 | 99 | | Plus |
BS17294.3prime Sequence
480 bp (480 high quality bases) assembled on 2007-05-15
> BS17294.3prime
ATGGTCTAGAAAGCTTTTACTGGTCTTCTGTTATGTTTATATCAATAGAA
TCCGGCACATCTTTTGGATATTGCTGATTAAAATCAGACGCTGCAAGACT
ACGGTCATTCAGAACTTCTGTCTCGTCGGAACTCGGATCCAAGTCGAGAA
ACGCCTTGGAGATCATTTTGGGATTTAGTTCGGCATCCAGGTCGTTGTTC
TCAACTATTTTAATCAAAATTTCCAGGAGCAATTCACAACACTTCTTTTC
GTAGCCCATAACATTGGAAATGGCATTATGGATTGTGTCCTTCATTTTTA
ACAGCTCTTGATTCAAGTTTTCGATATCAACTAGAGCTTTCTGGGAACTG
GCCAAAGAAACAGCAATGCGACGTCCCAGATCCTCGTGCTCCAGGCGCAT
ATTGGTGGCATTTTCCCGAAGACATTGGAGCCAAATAGAACGCTTGGCCA
TTCCCCTCATGTTCATGTCGACTGATAACT
BS17294.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:23:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13476-PB | 450 | CG13476-RB | 1..450 | 466..17 | 2225 | 99.7 | Minus |
CG13476-PA | 339 | CG13476-RA | 1..282 | 466..185 | 1385 | 99.6 | Minus |
CG13476-PA | 339 | CG13476-RA | 283..339 | 73..17 | 285 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:24:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13476-RB | 694 | CG13476-RB | 81..530 | 466..17 | 2235 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:23:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14705544..14705993 | 466..17 | 2235 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:23:57 has no hits.
BS17294.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:23:31 Download gff for
BS17294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-PB | 1..450 | 17..466 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:49:56 Download gff for
BS17294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 76..535 | 10..475 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:43:30 Download gff for
BS17294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 76..535 | 10..475 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:43:30 Download gff for
BS17294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14705539..14705998 | 10..475 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:49:56 Download gff for
BS17294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14698639..14699098 | 10..475 | 98 | | Minus |
BS17294.5prime Sequence
480 bp (480 high quality bases) assembled on 2007-05-15
> BS17294.5prime
GAAGTTATCAGTCGACATGAACATGAGGGGAATGGCCAAGCGTTCTATTT
GGCTCCAATGTCTTCGGGAAAATGCCACCAATATGCGCCTGGAGCACGAG
GATCTGGGACGTCGCATTGCTGTTTCTTTGGCCAGTTCCCAGAAAGCTCT
AGTTGATATCGAAAACTTGAATCAAGAGCTGTTAAAAATGAAGGACACAA
TCCATAATGCCATTTCCAATGTTATGGGCTACGAAAAGAAGTGTTGTGAA
TTGCTCCTGGAAATTTTGATTAAAATAGTTGAGAACAACGACCTGGATGC
CGAACTAAATCCCAAAATGATCTCCAAGGCGTTTCTCGACTTGGATCCGA
GTTCCGACGAGACAGAAGTTCTGAATGACCGTAGTCTTGCAGCGTCTGAT
TTTAATCAGCAATATCCAAAAGATGTGCCGGATTCTATTGATATAAACAT
AACAGAAGACCAGTAAAAGCTTTCTAGACC
BS17294.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:16:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13476-PB | 450 | CG13476-RB | 1..450 | 17..466 | 2225 | 99.7 | Plus |
CG13476-PA | 339 | CG13476-RA | 1..282 | 17..298 | 1385 | 99.6 | Plus |
CG13476-PA | 339 | CG13476-RA | 283..339 | 410..466 | 285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:44:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13476-RB | 694 | CG13476-RB | 81..530 | 17..466 | 2235 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:44:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14705544..14705993 | 17..466 | 2235 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 03:44:12 has no hits.
BS17294.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:16:27 Download gff for
BS17294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-PB | 1..450 | 17..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:26:25 Download gff for
BS17294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 76..535 | 8..473 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:29:18 Download gff for
BS17294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13476-RB | 76..535 | 8..473 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:29:18 Download gff for
BS17294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14705539..14705998 | 8..473 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:26:25 Download gff for
BS17294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14698639..14699098 | 8..473 | 98 | | Plus |
BS17294.pep Sequence
Translation from 16 to 465
> BS17294.pep
MNMRGMAKRSIWLQCLRENATNMRLEHEDLGRRIAVSLASSQKALVDIEN
LNQELLKMKDTIHNAISNVMGYEKKCCELLLEILIKIVENNDLDAELNPK
MISKAFLDLDPSSDETEVLNDRSLAASDFNQQYPKDVPDSIDINITEDQ*
BS17294.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13476-PB | 149 | CG13476-PB | 1..149 | 1..149 | 755 | 100 | Plus |