Clone Sequence Records
BS17311.complete Sequence
485 bp assembled on 2010-02-09
GenBank Submission: KX801880
> BS17311.complete
GAAGTTATCAGTCGACATGTTGCACAGCAGCTACAATCGCGCACCGCGCC
GCAAACTCATTCCGAATTTGTTTAGCAACATCCTACAGGTGATCGCCGAT
GCCGACCATCCGCTCACCGAACCCGAGATCATGGACGCGGTCGCCGATCG
GTTGGATCGCAGCGACGAGGAGCTGAAGCGCCAGATCACAGTAAGCCTCC
ACGACGCCCTAATCTACGGCTATCTGCGAGTGAAGAACTATCGTTACTCG
ATAGTGCCCAGTCGCCTGGATCCGGACGAACATCGCGATCATAACGAGCC
CAGTTCCTCCATCACCGCCGCCCCGGAACATAGTCGGCTGCAGGAGAGGA
TCTCGAGTGGAACCAGTGCTGCCATGGTTGACAACCAGGGTCGCGATGAA
GAACTCACACCAAAAAGCACTCAGGCGCTAAAGAGGTTAAATGCTGAGCC
GCAAGGGCAAACTAATTGAAAGCTTTCTAGACCAT
BS17311.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:01:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12691-RA | 453 | CG12691-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12691-RA | 573 | CG12691-RA | 64..516 | 17..469 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4266160..4266612 | 17..469 | 2265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:01:31 has no hits.
BS17311.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:32 Download gff for
BS17311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 1..453 | 17..469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:17 Download gff for
BS17311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 6..452 | 22..468 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:15 Download gff for
BS17311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 69..515 | 22..468 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:32 Download gff for
BS17311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 1..453 | 17..469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:59 Download gff for
BS17311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 69..515 | 22..468 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:59 Download gff for
BS17311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4266165..4266611 | 22..468 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:15 Download gff for
BS17311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4160198..4160644 | 22..468 | 100 | | Plus |
BS17311.3prime Sequence
483 bp (483 high quality bases) assembled on 2007-05-15
> BS17311.3prime
ATGGTCTAGAAAGCTTTCAATTAGTTTGCCCTTGCGGCTCAGCATTTAAC
CTCTTTAGCGCCTGAGTGCTTTTTGGTGTGAGTTCTTCATCGCGACCCTG
GTTGTCAACCATGGCAGCACTGGTTCCACTCGAGATCCTCTCCTGCAGCC
GACTATGTTCCGGGGCGGCGGTGATGGAGGAACTGGGCTCGTTATGATCG
CGATGTTCGTCCGGATCCAGGCGACTGGGCACTATCGAGTAACGATAGTT
CTTCACTCGCAGATAGCCGTAGATTAGGGCGTCGTGGAGGCTTACTGTGA
TCTGGCGCTTCAGCTCCTCGTCGCTGCGATCCAACCGATCGGCGACCGCG
TCCATGATCTCGGGTTCGGTGAGCGGATGGTCGGCATCGGCGATCACCTG
TAGGATGTTGCTAAACAAATTCGGAATGAGTTTGCGGCGCGGTGCGCGAT
TGTAGCTGCTGTGCAACATGTCGACTGATAACT
BS17311.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:34:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12691-PA | 453 | CG12691-RA | 1..453 | 469..17 | 2265 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:04:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12691-RA | 573 | CG12691-RA | 64..516 | 469..17 | 2265 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:04:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4266160..4266612 | 469..17 | 2265 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 21:04:28 has no hits.
BS17311.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:34:51 Download gff for
BS17311.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-PA | 1..453 | 17..469 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:38:48 Download gff for
BS17311.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 53..519 | 14..477 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:38:56 Download gff for
BS17311.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 53..519 | 14..477 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:38:56 Download gff for
BS17311.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4266149..4266615 | 14..477 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:38:48 Download gff for
BS17311.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4160182..4160648 | 14..477 | 98 | | Minus |
BS17311.5prime Sequence
483 bp (483 high quality bases) assembled on 2007-05-15
> BS17311.5prime
GAAGTTATCAGTCGACATGTTGCACAGCAGCTACAATCGCGCACCGCGCC
GCAAACTCATTCCGAATTTGTTTAGCAACATCCTACAGGTGATCGCCGAT
GCCGACCATCCGCTCACCGAACCCGAGATCATGGACGCGGTCGCCGATCG
GTTGGATCGCAGCGACGAGGAGCTGAAGCGCCAGATCACAGTAAGCCTCC
ACGACGCCCTAATCTACGGCTATCTGCGAGTGAAGAACTATCGTTACTCG
ATAGTGCCCAGTCGCCTGGATCCGGACGAACATCGCGATCATAACGAGCC
CAGTTCCTCCATCACCGCCGCCCCGGAACATAGTCGGCTGCAGGAGAGGA
TCTCGAGTGGAACCAGTGCTGCCATGGTTGACAACCAGGGTCGCGATGAA
GAACTCACACCAAAAAGCACTCAGGCGCTAAAGAGGTTAAATGCTGAGCC
GCAAGGGCAAACTAATTGAAAGCTTTCTAGACC
BS17311.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:27:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12691-PA | 453 | CG12691-RA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:16:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12691-RA | 573 | CG12691-RA | 64..516 | 17..469 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:16:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4266160..4266612 | 17..469 | 2265 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:16:38 has no hits.
BS17311.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:27:27 Download gff for
BS17311.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-PA | 1..453 | 17..469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:51:06 Download gff for
BS17311.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 53..519 | 9..472 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:05:49 Download gff for
BS17311.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12691-RA | 53..519 | 9..472 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:05:49 Download gff for
BS17311.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4266159..4266615 | 11..472 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:51:06 Download gff for
BS17311.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4160192..4160648 | 11..472 | 98 | | Plus |
BS17311.pep Sequence
Translation from 16 to 468
> BS17311.pep
MLHSSYNRAPRRKLIPNLFSNILQVIADADHPLTEPEIMDAVADRLDRSD
EELKRQITVSLHDALIYGYLRVKNYRYSIVPSRLDPDEHRDHNEPSSSIT
AAPEHSRLQERISSGTSAAMVDNQGRDEELTPKSTQALKRLNAEPQGQTN
*
BS17311.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12691-PA | 150 | CG12691-PA | 1..150 | 1..150 | 766 | 100 | Plus |