Clone Sequence Records
BS17318.3prime Sequence
459 bp (459 high quality bases) assembled on 2007-05-15
> BS17318.3prime
ATGGTCTAGAAAGCTTTTAGTAACCCCGCTGCTTGTAACCACCTCCACCT
CCGTAAAGATCCTGATTCTTGTGCGGATAATGGACACTGGCAGGATGAGA
CGGCTGAGAGTAGTATCCAGGCGAAGGACGCACTGACCAAGGTGGTGGAT
AGTAGTCATTTGCTGCCGGAACCGGTCGTGGTGGGTAATAGGCATAGCCA
CCTGGATGCGTCTGCTGGTGGCTACCACCGTAGCCGTAGCCTCCACCATA
GTGATAGTCGTAGCCCTGCTCGTAGCCCTCCTGGATGAGTGGACCTGGTC
CAGGATGTAGCTGTGGATCAACTGGCCTTGCTGGCGGATAATGATTTGGG
TCGCCGAACAGAAGCTCCGCAATCTTATCGAAAGTGGGTCTACCGTGGGC
CAAGCTGGCCAGGATTAGCACTAGAATCGCAGCCAACAACTGCATGTCGA
CTGATAACT
BS17318.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:35:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-PA | 429 | CG13641-RA | 1..429 | 445..17 | 2145 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-RA | 542 | CG13641-RA | 27..455 | 445..17 | 2145 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:20:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24864278..24864706 | 17..445 | 2145 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:20:27 has no hits.
BS17318.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:35:22 Download gff for
BS17318.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-PA | 1..429 | 17..445 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:52:21 Download gff for
BS17318.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 27..459 | 11..445 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:01:48 Download gff for
BS17318.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 27..459 | 11..445 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:01:48 Download gff for
BS17318.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24864274..24864706 | 11..445 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:52:21 Download gff for
BS17318.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20689996..20690428 | 11..445 | 99 | | Plus |
BS17318.5prime Sequence
459 bp (459 high quality bases) assembled on 2007-05-15
> BS17318.5prime
GAAGTTATCAGTCGACATGCAGTTGTTGGCTGCGATTCTAGTGCTAATCC
TGGCCAGCTTGGCCCACGGTAGACCCACTTTCGATAAGATTGCGGAGCTT
CTGTTCGGCGACCCAAATCATTATCCGCCAGCAAGGCCAGTTGATCCACA
GCTACATCCTGGACCAGGTCCACTCATCCAGGAGGGCTACGAGCAGGGCT
ACGACTATCACTATGGTGGAGGCTACGGCTACGGTGGTAGCCACCAGCAG
ACGCATCCAGGTGGCTATGCCTATTACCCACCACGACCGGTTCCGGCAGC
AAATGACTACTATCCACCACCTTGGTCAGTGCGTCCTTCGCCTGGATACT
ACTCTCAGCCGTCTCATCCTGCCAGTGTCCATTATCCGCACAAGAATCAG
GATCTTTACGGAGGTGGAGGTGGTTACAAGCAGCGGGGTTACTAAAAGCT
TTCTAGACC
BS17318.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:27:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-PA | 429 | CG13641-RA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:07:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-RA | 542 | CG13641-RA | 27..455 | 17..445 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:07:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24864278..24864706 | 445..17 | 2145 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:07:44 has no hits.
BS17318.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:28:01 Download gff for
BS17318.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-PA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:49:53 Download gff for
BS17318.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 27..459 | 17..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:06:53 Download gff for
BS17318.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 27..459 | 17..451 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:06:53 Download gff for
BS17318.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24864274..24864706 | 17..451 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:49:53 Download gff for
BS17318.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20689996..20690428 | 17..451 | 99 | | Minus |
BS17318.complete Sequence
461 bp assembled on 2007-05-30
GenBank Submission: KX806429
> BS17318.complete
GAAGTTATCAGTCGACATGCAGTTGTTGGCTGCGATTCTAGTGCTAATCC
TGGCCAGCTTGGCCCACGGTAGACCCACTTTCGATAAGATTGCGGAGCTT
CTGTTCGGCGACCCAAATCATTATCCGCCAGCAAGGCCAGTTGATCCACA
GCTACATCCTGGACCAGGTCCACTCATCCAGGAGGGCTACGAGCAGGGCT
ACGACTATCACTATGGTGGAGGCTACGGCTACGGTGGTAGCCACCAGCAG
ACGCATCCAGGTGGCTATGCCTATTACCCACCACGACCGGTTCCGGCAGC
AAATGACTACTATCCACCACCTTGGTCAGTGCGTCCTTCGCCTGGATACT
ACTCTCAGCCGTCTCATCCTGCCAGTGTCCATTATCCGCACAAGAATCAG
GATCTTTACGGAGGTGGAGGTGGTTACAAGCAGCGGGGTTACTAAAAGCT
TTCTAGACCAT
BS17318.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:02:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-RA | 429 | CG13641-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:02:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-RA | 542 | CG13641-RA | 27..455 | 17..445 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:02:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24864278..24864706 | 445..17 | 2145 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:02:41 has no hits.
BS17318.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:37:36 Download gff for
BS17318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:16:16 Download gff for
BS17318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 75..507 | 17..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:04:07 Download gff for
BS17318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 27..453 | 17..443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:37:37 Download gff for
BS17318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 75..507 | 17..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:11:30 Download gff for
BS17318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 27..453 | 17..443 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:11:30 Download gff for
BS17318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24864280..24864706 | 17..443 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:04:07 Download gff for
BS17318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20690002..20690428 | 17..443 | 100 | | Minus |
BS17318.pep Sequence
Translation from 16 to 444
> BS17318.pep
MQLLAAILVLILASLAHGRPTFDKIAELLFGDPNHYPPARPVDPQLHPGP
GPLIQEGYEQGYDYHYGGGYGYGGSHQQTHPGGYAYYPPRPVPAANDYYP
PPWSVRPSPGYYSQPSHPASVHYPHKNQDLYGGGGGYKQRGY*
BS17318.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:32:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-PA | 142 | CG13641-PA | 1..142 | 1..142 | 818 | 100 | Plus |