Clone Sequence Records
BS17319.complete Sequence
308 bp assembled on 2010-02-09
GenBank Submission: KX800769
> BS17319.complete
GAAGTTATCAGTCGACATGGACAGCGCCGATGAGCAGCTGCAGCTGGATC
TGGACAGGATATCGATGGAGAGTCGCCAGGCCAGCAGTTTCGATGACCTC
ATCGAGCTGACCAACAACTCGGAGCGTCTGATGGCCAGAGTCAATTCCAG
CTTGGATGACCTAAACACCGCCCTCGACAACCTGGAGGCTCGAACGGACC
GGGTTCTGGTCGAGATTCGGAGGCTAATCAGCTCGGAAATGCCGGCACAA
GGTCCGCACGATGGATGTGGCGATCCAGATGCCAGGGCGTAGAAGCTTTC
TAGACCAT
BS17319.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 276 | CG13838-PA | 1..276 | 17..292 | 1380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 429 | CG13838-RA | 93..368 | 17..292 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23042333..23042608 | 17..292 | 1380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:13:02 has no hits.
BS17319.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:15 Download gff for
BS17319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 1..276 | 17..292 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:16:41 Download gff for
BS17319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 93..368 | 17..292 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:22 Download gff for
BS17319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 93..368 | 17..292 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:15 Download gff for
BS17319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 82..370 | 5..296 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:23 Download gff for
BS17319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 93..368 | 17..292 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:23 Download gff for
BS17319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23042333..23042608 | 17..292 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:22 Download gff for
BS17319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18868055..18868330 | 17..292 | 100 | | Plus |
BS17319.3prime Sequence
306 bp (306 high quality bases) assembled on 2007-05-15
> BS17319.3prime
ATGGTCTAGAAAGCTTCTACGCCCTGGCATCTGGATCGCCACATCCATCG
TGCGGACCTTGTGCCGGCATTTCCGAGCTGATTAGCCTCCGAATCTCGAC
CAGAACCCGGTCCGTTCGAGCCTCCAGGTTGTCGAGGGCGGTGTTTAGGT
CATCCAAGCTGGAATTGACTCTGGCCATCAGACGCTCCGAGTTGTTGGTC
AGCTCGATGAGGTCATCGAAACTGCTGGCCTGGCGACTCTCCATCGATAT
CCTGTCCAGATCCAGCTGCAGCTGCTCATCGGCGCTGTCCATGTCGACTG
ATAACT
BS17319.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:31:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-PA | 276 | CG13838-RA | 1..276 | 292..17 | 1380 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:05:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 429 | CG13838-RA | 93..368 | 292..17 | 1380 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:05:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23042333..23042608 | 292..17 | 1380 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:05:37 has no hits.
BS17319.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:31:34 Download gff for
BS17319.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-PA | 1..276 | 17..292 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:57:32 Download gff for
BS17319.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 82..370 | 13..304 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:25:05 Download gff for
BS17319.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 82..370 | 13..304 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:25:05 Download gff for
BS17319.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23042322..23042610 | 13..304 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:57:32 Download gff for
BS17319.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18868044..18868332 | 13..304 | 97 | | Minus |
BS17319.5prime Sequence
306 bp (306 high quality bases) assembled on 2007-05-15
> BS17319.5prime
GAAGTTATCAGTCGACATGGACAGCGCCGATGAGCAGCTGCAGCTGGATC
TGGACAGGATATCGATGGAGAGTCGCCAGGCCAGCAGTTTCGATGACCTC
ATCGAGCTGACCAACAACTCGGAGCGTCTGATGGCCAGAGTCAATTCCAG
CTTGGATGACCTAAACACCGCCCTCGACAACCTGGAGGCTCGAACGGACC
GGGTTCTGGTCGAGATTCGGAGGCTAATCAGCTCGGAAATGCCGGCACAA
GGTCCGCACGATGGATGTGGCGATCCAGATGCCAGGGCGTAGAAGCTTTC
TAGACC
BS17319.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:24:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-PA | 276 | CG13838-RA | 1..276 | 17..292 | 1380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:14:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 429 | CG13838-RA | 93..368 | 17..292 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:14:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23042333..23042608 | 17..292 | 1380 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:14:55 has no hits.
BS17319.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:24:24 Download gff for
BS17319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-PA | 1..276 | 17..292 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:50:31 Download gff for
BS17319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 82..370 | 5..296 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:58:39 Download gff for
BS17319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 82..370 | 5..296 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:58:39 Download gff for
BS17319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23042322..23042610 | 5..296 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:50:31 Download gff for
BS17319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18868044..18868332 | 5..296 | 97 | | Plus |
BS17319.pep Sequence
Translation from 16 to 291
> BS17319.pep
MDSADEQLQLDLDRISMESRQASSFDDLIELTNNSERLMARVNSSLDDLN
TALDNLEARTDRVLVEIRRLISSEMPAQGPHDGCGDPDARA*
BS17319.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:50:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-PA | 91 | CG13838-PA | 1..91 | 1..91 | 453 | 100 | Plus |
