Clone Sequence Records
BS17324.complete Sequence
473 bp assembled on 2010-02-09
GenBank Submission: KX801524
> BS17324.complete
GAAGTTATCAGTCGACATGGGCAGAAACAATCGCTCGAGAAAGCGTCGTG
ATGAAATGAATAAGATAAAGAAGGCGCGGTACGAAGCCAAGGAGTTAATT
CGACTGAAGAAAACTCTGGGACTCCTAGATGCCGATGGAAATGAGATCAT
GAAGGATATAAGCGATGTGGTCGAAATTAAGACCGCCAAGGAGCTCAAAA
GGGAGGCCAAATCCAAGGAGGAGCAGGAATTGATCTACGAGCACCAGGAG
AGTCTGGAGAAGGGCGAGAAAGTCAAGGTGACCAACGAGAACACGGGCGT
GGAGCACATTTTCAACAGCAAGACCCTCAAAGATCAGTACGGCAATTATC
CTGCGTGGTTCAAGAAGAAGAAGACCGCCAAGCGTCTAAGAAAGAAGCAG
CACTCGCAGAAGAAGAACTTCAAACAGGCCTGGACCACGGTTAATGTTCC
CCTATAAAAGCTTTCTAGACCAT
BS17324.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:00:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15019-RB | 441 | CG15019-PB | 1..441 | 17..457 | 2205 | 100 | Plus |
| CG15019-RA | 441 | CG15019-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15019-RB | 764 | CG15019-RB | 86..531 | 13..458 | 2215 | 99.8 | Plus |
| CG15019-RA | 677 | CG15019-RA | 86..531 | 13..458 | 2215 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4405360..4405616 | 458..202 | 1285 | 100 | Minus |
| 3L | 28110227 | 3L | 4405784..4405974 | 203..13 | 940 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:00:21 has no hits.
BS17324.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:37:35 Download gff for
BS17324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RB | 1..441 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:08 Download gff for
BS17324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RB | 90..528 | 17..455 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:41 Download gff for
BS17324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RA | 90..528 | 17..455 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:37:38 Download gff for
BS17324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RB | 86..531 | 13..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:33 Download gff for
BS17324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RA | 90..528 | 17..455 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:33 Download gff for
BS17324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4405363..4405615 | 203..455 | 100 | <- | Minus |
| 3L | 4405785..4405970 | 17..202 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:41 Download gff for
BS17324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4405363..4405615 | 203..455 | 100 | <- | Minus |
| arm_3L | 4405785..4405970 | 17..202 | 100 | | Minus |
BS17324.3prime Sequence
471 bp (471 high quality bases) assembled on 2007-05-15
> BS17324.3prime
ATGGTCTAGAAAGCTTTTATAGGGGAACATTAACCGTGGTCCAGGCCTGT
TTGAAGTTCTTCTTCTGCGAGTGCTGCTTCTTTCTTAGACGCTTGGCGGT
CTTCTTCTTCTTGAACCACGCAGGATAATTGCCGTACTGATCTTTGAGGG
TCTTGCTGTTGAAAATGTGCTCCACGCCCGTGTTCTCGTTGGTCACCTTG
ACTTTCTCGCCCTTCTCCAGACTCTCCTGGTGCTCGTAGATCAATTCCTG
CTCCTCCTTGGATTTGGCCTCCCTTTTGAGCTCCTTGGCGGTCTTAATTT
CGACCACATCGCTTATATCCTTCATGATCTCATTTCCATCGGCATCTAGG
AGTCCCAGAGTTTTCTTCAGTCGAATTAACTCCTTGGCTTCGTACCGCGC
CTTCTTTATCTTATTCATTTCATCACGACGCTTTCTCGAGCGATTGTTTC
TGCCCATGTCGACTGATAACT
BS17324.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:35:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15019-PA | 441 | CG15019-RA | 1..441 | 457..17 | 2205 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15019-RB | 764 | CG15019-RB | 86..531 | 461..16 | 2215 | 99.8 | Minus |
| CG15019-RA | 677 | CG15019-RA | 86..531 | 461..16 | 2215 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:07:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4405360..4405616 | 16..272 | 1285 | 100 | Plus |
| 3L | 28110227 | 3L | 4405784..4405974 | 271..461 | 940 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:07:23 has no hits.
BS17324.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:35:28 Download gff for
BS17324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-PA | 1..441 | 17..457 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:58:14 Download gff for
BS17324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RA | 86..531 | 16..461 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:26:29 Download gff for
BS17324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RA | 86..531 | 16..461 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:26:29 Download gff for
BS17324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4405360..4405615 | 16..271 | 100 | <- | Plus |
| 3L | 4405785..4405974 | 272..461 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:58:14 Download gff for
BS17324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4405360..4405615 | 16..271 | 100 | <- | Plus |
| arm_3L | 4405785..4405974 | 272..461 | 99 | | Plus |
BS17324.5prime Sequence
471 bp (471 high quality bases) assembled on 2007-05-15
> BS17324.5prime
GAAGTTATCAGTCGACATGGGCAGAAACAATCGCTCGAGAAAGCGTCGTG
ATGAAATGAATAAGATAAAGAAGGCGCGGTACGAAGCCAAGGAGTTAATT
CGACTGAAGAAAACTCTGGGACTCCTAGATGCCGATGGAAATGAGATCAT
GAAGGATATAAGCGATGTGGTCGAAATTAAGACCGCCAAGGAGCTCAAAA
GGGAGGCCAAATCCAAGGAGGAGCAGGAATTGATCTACGAGCACCAGGAG
AGTCTGGAGAAGGGCGAGAAAGTCAAGGTGACCAACGAGAACACGGGCGT
GGAGCACATTTTCAACAGCAAGACCCTCAAAGATCAGTACGGCAATTATC
CTGCGTGGTTCAAGAAGAAGAAGACCGCCAAGCGTCTAAGAAAGAAGCAG
CACTCGCAGAAGAAGAACTTCAAACAGGCCTGGACCACGGTTAATGTTCC
CCTATAAAAGCTTTCTAGACC
BS17324.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:28:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15019-PA | 441 | CG15019-RA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:11:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15019-RB | 764 | CG15019-RB | 86..531 | 13..458 | 2215 | 99.8 | Plus |
| CG15019-RA | 677 | CG15019-RA | 86..531 | 13..458 | 2215 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:11:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4405360..4405616 | 458..202 | 1285 | 100 | Minus |
| 3L | 28110227 | 3L | 4405784..4405974 | 203..13 | 940 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-13 00:11:18 has no hits.
BS17324.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:28:06 Download gff for
BS17324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-PA | 1..441 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:54:02 Download gff for
BS17324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RA | 86..531 | 13..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:47:22 Download gff for
BS17324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RA | 86..531 | 13..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:47:22 Download gff for
BS17324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4405360..4405615 | 203..458 | 100 | <- | Minus |
| 3L | 4405785..4405974 | 13..202 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:54:02 Download gff for
BS17324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4405360..4405615 | 203..458 | 100 | <- | Minus |
| arm_3L | 4405785..4405974 | 13..202 | 99 | | Minus |
BS17324.pep Sequence
Translation from 16 to 456
> BS17324.pep
MGRNNRSRKRRDEMNKIKKARYEAKELIRLKKTLGLLDADGNEIMKDISD
VVEIKTAKELKREAKSKEEQELIYEHQESLEKGEKVKVTNENTGVEHIFN
SKTLKDQYGNYPAWFKKKKTAKRLRKKQHSQKKNFKQAWTTVNVPL*
BS17324.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15019-PB | 146 | CG15019-PB | 1..146 | 1..146 | 749 | 100 | Plus |
| CG15019-PA | 146 | CG15019-PA | 1..146 | 1..146 | 749 | 100 | Plus |
