Clone Sequence Records
BS17326.complete Sequence
509 bp assembled on 2010-02-09
GenBank Submission: KX801838
> BS17326.complete
GAAGTTATCAGTCGACATGGAGAACATGAACAAAGAACTCGCGAATATGG
AGAAACTATCTTTGAAGGAGCTGCTCAGTGAGGACACACTCTCTGAATTG
GCTACCCCGAATGATGTCGACATTGCCGGCGAGGAAAAGAACCTCGAGGG
TCAATCTGTTTCGAAGGAAGATCCACCGCCTGCGGCAGTTGTACCCAAAG
CGACCAAAGCGCCCAATAATCCCGAAGCGCTAACCCAAAAGCAGAGTATG
GACTATGCGGCACGGATCGTGAAGGTCATCAACCTACAGATGCAAAATGT
GGTGCATAAAACGTTCATGATGATGCAATCACCACTCCCTCTCCGGAACA
GGCTACCAGTGGTCGTGTCCACCATGATCCGCTCCCGTAGGGCACCCAAG
TTGAAGCTCAAAGATGTGAGGAGAGTGATCACGGGCCTGGCGCTGCATCG
TGCACACCTGGTCTACGAATATATTATCAACCACCCCGAATAAAAGCTTT
CTAGACCAT
BS17326.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:00:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15882-RA | 477 | CG15882-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15882-RA | 634 | CG15882-RA | 113..589 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19123800..19124276 | 493..17 | 2385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:00:57 has no hits.
BS17326.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:21 Download gff for
BS17326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 1..477 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:12 Download gff for
BS17326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 113..587 | 17..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:58 Download gff for
BS17326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 113..587 | 17..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:21 Download gff for
BS17326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 106..600 | 9..503 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:46 Download gff for
BS17326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 113..587 | 17..491 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:46 Download gff for
BS17326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19123802..19124276 | 17..491 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:58 Download gff for
BS17326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19017835..19018309 | 17..491 | 100 | | Minus |
BS17326.3prime Sequence
507 bp (507 high quality bases) assembled on 2007-05-15
> BS17326.3prime
ATGGTCTAGAAAGCTTTTATTCGGGGTGGTTGATAATATATTCGTAGACC
AGGTGTGCACGATGCAGCGCCAGGCCCGTGATCACTCTCCTCACATCTTT
GAGCTTCAACTTGGGTGCCCTACGGGAGCGGATCATGGTGGACACGACCA
CTGGTAGCCTGTTCCGGAGAGGGAGTGGTGATTGCATCATCATGAACGTT
TTATGCACCACATTTTGCATCTGTAGGTTGATGACCTTCACGATCCGTGC
CGCATAGTCCATACTCTGCTTTTGGGTTAGCGCTTCGGGATTATTGGGCG
CTTTGGTCGCTTTGGGTACAACTGCCGCAGGCGGTGGATCTTCCTTCGAA
ACAGATTGACCCTCGAGGTTCTTTTCCTCGCCGGCAATGTCGACATCATT
CGGGGTAGCCAATTCAGAGAGTGTGTCCTCACTGAGCAGCTCCTTCAAAG
ATAGTTTCTCCATATTCGCGAGTTCTTTGTTCATGTTCTCCATGTCGACT
GATAACT
BS17326.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:31:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15882-PA | 477 | CG15882-RA | 1..477 | 493..17 | 2385 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:51:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15882-RA | 634 | CG15882-RA | 113..589 | 493..17 | 2385 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:51:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19123800..19124276 | 17..493 | 2385 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:51:02 has no hits.
BS17326.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:32:00 Download gff for
BS17326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-PA | 1..477 | 17..493 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:02:08 Download gff for
BS17326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 106..600 | 7..501 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:57:45 Download gff for
BS17326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 106..600 | 7..501 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:57:45 Download gff for
BS17326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19123789..19124283 | 7..501 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:02:08 Download gff for
BS17326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19017822..19018316 | 7..501 | 98 | | Plus |
BS17326.5prime Sequence
507 bp (507 high quality bases) assembled on 2007-05-15
> BS17326.5prime
GAAGTTATCAGTCGACATGGAGAACATGAACAAAGAACTCGCGAATATGG
AGAAACTATCTTTGAAGGAGCTGCTCAGTGAGGACACACTCTCTGAATTG
GCTACCCCGAATGATGTCGACATTGCCGGCGAGGAAAAGAACCTCGAGGG
TCAATCTGTTTCGAAGGAAGATCCACCGCCTGCGGCAGTTGTACCCAAAG
CGACCAAAGCGCCCAATAATCCCGAAGCGCTAACCCAAAAGCAGAGTATG
GACTATGCGGCACGGATCGTGAAGGTCATCAACCTACAGATGCAAAATGT
GGTGCATAAAACGTTCATGATGATGCAATCACCACTCCCTCTCCGGAACA
GGCTACCAGTGGTCGTGTCCACCATGATCCGCTCCCGTAGGGCACCCAAG
TTGAAGCTCAAAGATGTGAGGAGAGTGATCACGGGCCTGGCGCTGCATCG
TGCACACCTGGTCTACGAATATATTATCAACCACCCCGAATAAAAGCTTT
CTAGACC
BS17326.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:24:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15882-PA | 477 | CG15882-RA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:59:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15882-RA | 634 | CG15882-RA | 113..589 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:59:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19123800..19124276 | 493..17 | 2385 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:59:15 has no hits.
BS17326.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:24:36 Download gff for
BS17326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-PA | 1..477 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:35:27 Download gff for
BS17326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 106..600 | 9..503 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:26:37 Download gff for
BS17326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15882-RA | 106..600 | 9..503 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:37 Download gff for
BS17326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19123789..19124283 | 9..503 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:35:27 Download gff for
BS17326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19017822..19018316 | 9..503 | 98 | | Minus |
BS17326.pep Sequence
Translation from 16 to 492
> BS17326.pep
MENMNKELANMEKLSLKELLSEDTLSELATPNDVDIAGEEKNLEGQSVSK
EDPPPAAVVPKATKAPNNPEALTQKQSMDYAARIVKVINLQMQNVVHKTF
MMMQSPLPLRNRLPVVVSTMIRSRRAPKLKLKDVRRVITGLALHRAHLVY
EYIINHPE*
BS17326.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15882-PA | 158 | CG15882-PA | 1..158 | 1..158 | 792 | 100 | Plus |