Clone BS17326 Report

Search the DGRC for BS17326

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:173
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG15882-RA
Protein status:BS17326.pep: full length peptide match
Sequenced Size:509

Clone Sequence Records

BS17326.complete Sequence

509 bp assembled on 2010-02-09

GenBank Submission: KX801838

> BS17326.complete
GAAGTTATCAGTCGACATGGAGAACATGAACAAAGAACTCGCGAATATGG
AGAAACTATCTTTGAAGGAGCTGCTCAGTGAGGACACACTCTCTGAATTG
GCTACCCCGAATGATGTCGACATTGCCGGCGAGGAAAAGAACCTCGAGGG
TCAATCTGTTTCGAAGGAAGATCCACCGCCTGCGGCAGTTGTACCCAAAG
CGACCAAAGCGCCCAATAATCCCGAAGCGCTAACCCAAAAGCAGAGTATG
GACTATGCGGCACGGATCGTGAAGGTCATCAACCTACAGATGCAAAATGT
GGTGCATAAAACGTTCATGATGATGCAATCACCACTCCCTCTCCGGAACA
GGCTACCAGTGGTCGTGTCCACCATGATCCGCTCCCGTAGGGCACCCAAG
TTGAAGCTCAAAGATGTGAGGAGAGTGATCACGGGCCTGGCGCTGCATCG
TGCACACCTGGTCTACGAATATATTATCAACCACCCCGAATAAAAGCTTT
CTAGACCAT

BS17326.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:00:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15882-RA 477 CG15882-PA 1..477 17..493 2385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG15882-RA 634 CG15882-RA 113..589 17..493 2385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19123800..19124276 493..17 2385 100 Minus
Blast to na_te.dros performed on 2014-11-28 03:00:57 has no hits.

BS17326.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:21 Download gff for BS17326.complete
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 1..477 17..493 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:12 Download gff for BS17326.complete
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 113..587 17..491 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:58 Download gff for BS17326.complete
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 113..587 17..491 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:21 Download gff for BS17326.complete
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 106..600 9..503 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:46 Download gff for BS17326.complete
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 113..587 17..491 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:46 Download gff for BS17326.complete
Subject Subject Range Query Range Percent Splice Strand
X 19123802..19124276 17..491 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:58 Download gff for BS17326.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19017835..19018309 17..491 100   Minus

BS17326.3prime Sequence

507 bp (507 high quality bases) assembled on 2007-05-15

> BS17326.3prime
ATGGTCTAGAAAGCTTTTATTCGGGGTGGTTGATAATATATTCGTAGACC
AGGTGTGCACGATGCAGCGCCAGGCCCGTGATCACTCTCCTCACATCTTT
GAGCTTCAACTTGGGTGCCCTACGGGAGCGGATCATGGTGGACACGACCA
CTGGTAGCCTGTTCCGGAGAGGGAGTGGTGATTGCATCATCATGAACGTT
TTATGCACCACATTTTGCATCTGTAGGTTGATGACCTTCACGATCCGTGC
CGCATAGTCCATACTCTGCTTTTGGGTTAGCGCTTCGGGATTATTGGGCG
CTTTGGTCGCTTTGGGTACAACTGCCGCAGGCGGTGGATCTTCCTTCGAA
ACAGATTGACCCTCGAGGTTCTTTTCCTCGCCGGCAATGTCGACATCATT
CGGGGTAGCCAATTCAGAGAGTGTGTCCTCACTGAGCAGCTCCTTCAAAG
ATAGTTTCTCCATATTCGCGAGTTCTTTGTTCATGTTCTCCATGTCGACT
GATAACT

BS17326.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15882-PA 477 CG15882-RA 1..477 493..17 2385 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15882-RA 634 CG15882-RA 113..589 493..17 2385 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19123800..19124276 17..493 2385 100 Plus
Blast to na_te.dros performed on 2015-02-11 02:51:02 has no hits.

BS17326.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:32:00 Download gff for BS17326.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15882-PA 1..477 17..493 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:02:08 Download gff for BS17326.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 106..600 7..501 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:57:45 Download gff for BS17326.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 106..600 7..501 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:57:45 Download gff for BS17326.3prime
Subject Subject Range Query Range Percent Splice Strand
X 19123789..19124283 7..501 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:02:08 Download gff for BS17326.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19017822..19018316 7..501 98   Plus

BS17326.5prime Sequence

507 bp (507 high quality bases) assembled on 2007-05-15

> BS17326.5prime
GAAGTTATCAGTCGACATGGAGAACATGAACAAAGAACTCGCGAATATGG
AGAAACTATCTTTGAAGGAGCTGCTCAGTGAGGACACACTCTCTGAATTG
GCTACCCCGAATGATGTCGACATTGCCGGCGAGGAAAAGAACCTCGAGGG
TCAATCTGTTTCGAAGGAAGATCCACCGCCTGCGGCAGTTGTACCCAAAG
CGACCAAAGCGCCCAATAATCCCGAAGCGCTAACCCAAAAGCAGAGTATG
GACTATGCGGCACGGATCGTGAAGGTCATCAACCTACAGATGCAAAATGT
GGTGCATAAAACGTTCATGATGATGCAATCACCACTCCCTCTCCGGAACA
GGCTACCAGTGGTCGTGTCCACCATGATCCGCTCCCGTAGGGCACCCAAG
TTGAAGCTCAAAGATGTGAGGAGAGTGATCACGGGCCTGGCGCTGCATCG
TGCACACCTGGTCTACGAATATATTATCAACCACCCCGAATAAAAGCTTT
CTAGACC

BS17326.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:24:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15882-PA 477 CG15882-RA 1..477 17..493 2385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15882-RA 634 CG15882-RA 113..589 17..493 2385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:59:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19123800..19124276 493..17 2385 100 Minus
Blast to na_te.dros performed on 2015-02-10 15:59:15 has no hits.

BS17326.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:24:36 Download gff for BS17326.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15882-PA 1..477 17..493 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:35:27 Download gff for BS17326.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 106..600 9..503 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:26:37 Download gff for BS17326.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15882-RA 106..600 9..503 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:37 Download gff for BS17326.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19123789..19124283 9..503 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:35:27 Download gff for BS17326.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19017822..19018316 9..503 98   Minus

BS17326.pep Sequence

Translation from 16 to 492

> BS17326.pep
MENMNKELANMEKLSLKELLSEDTLSELATPNDVDIAGEEKNLEGQSVSK
EDPPPAAVVPKATKAPNNPEALTQKQSMDYAARIVKVINLQMQNVVHKTF
MMMQSPLPLRNRLPVVVSTMIRSRRAPKLKLKDVRRVITGLALHRAHLVY
EYIINHPE*

BS17326.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15882-PA 158 CG15882-PA 1..158 1..158 792 100 Plus