Clone Sequence Records
BS17336.complete Sequence
356 bp assembled on 2010-02-09
GenBank Submission: KX804272
> BS17336.complete
GAAGTTATCAGTCGACATGCCGGAAACGAAACCCAAGACGCACTGCCGAC
CCAGCAATGGCCTCGACCAGACGGAGGAGTCCGACACTCGTCTGGCTGCC
AATCTGGTCACCCAAAGGAACCTCCAATTGCACCCACGTCCACAGCACCC
ACGCCCACAGCGAGCTCGTCGAGATGCCACCGGCTTTACGTCCAACCAGG
AGGTGCGGCTAAAAGCCGGCGACATGCGCATGGCCCGGCTGCAGATCAGT
CTCTCCCAGCTGCGAACCGCAATGGAGGAGTCGGGCAAGCAGCTGAAGGA
CCTCTGCCAGCAGGTGCGGTTGAATGTGGATGCTGAGTGAAAGCTTTCTA
GACCAT
BS17336.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15638-RA | 324 | CG15638-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:40:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15638-RA | 488 | CG15638-RA | 58..382 | 17..341 | 1625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13535397..13535721 | 341..17 | 1625 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:40:22 has no hits.
BS17336.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:06:45 Download gff for
BS17336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 1..324 | 17..340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:02 Download gff for
BS17336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 62..384 | 17..339 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:16 Download gff for
BS17336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 58..380 | 17..339 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:06:45 Download gff for
BS17336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 60..393 | 14..349 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:34:21 Download gff for
BS17336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 58..380 | 17..339 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:34:21 Download gff for
BS17336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13535399..13535721 | 17..339 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:16 Download gff for
BS17336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13535399..13535721 | 17..339 | 100 | | Minus |
BS17336.3prime Sequence
354 bp (354 high quality bases) assembled on 2007-05-15
> BS17336.3prime
ATGGTCTAGAAAGCTTTCACTCAGCATCCACATTCAACCGCACCTGCTGG
CAGAGGTCCTTCAGCTGCTTGCCCGACTCCTCCATTGCGGTTCGCAGCTG
GGAGAGACTGATCTGCAGCCGGGCCATGCGCATGTCGCCGGCTTTTAGCC
GCACCTCCTGGTTGGACGTAAAGCCGGTGGCATCTCGACGAGCTCGCTGT
GGGCGTGGGTGCTGTGGACGTGGGTGCAATTGGAGGTTCCTTTGGGTGAC
CAGATTGGCAGCCAGACGAGTGTCGGACTCCTCCGTCTGGTCGAGGCCAT
TGCTGGGTCGGCAGTGCGTCTTGGGTTTCGTTTCCGGCATGTCGACTGAT
AACT
BS17336.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:35:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15638-PA | 324 | CG15638-RA | 1..324 | 340..17 | 1620 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15638-RA | 488 | CG15638-RA | 58..382 | 340..16 | 1625 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:38:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13535397..13535721 | 16..340 | 1625 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:38:36 has no hits.
BS17336.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:35:55 Download gff for
BS17336.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-PA | 1..324 | 17..340 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:45:05 Download gff for
BS17336.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 56..389 | 8..343 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:45:39 Download gff for
BS17336.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 56..389 | 8..343 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:45:39 Download gff for
BS17336.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13535390..13535723 | 8..343 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:45:05 Download gff for
BS17336.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13535390..13535723 | 8..343 | 98 | | Plus |
BS17336.5prime Sequence
354 bp (354 high quality bases) assembled on 2007-05-15
> BS17336.5prime
GAAGTTATCAGTCGACATGCCGGAAACGAAACCCAAGACGCACTGCCGAC
CCAGCAATGGCCTCGACCAGACGGAGGAGTCCGACACTCGTCTGGCTGCC
AATCTGGTCACCCAAAGGAACCTCCAATTGCACCCACGTCCACAGCACCC
ACGCCCACAGCGAGCTCGTCGAGATGCCACCGGCTTTACGTCCAACCAGG
AGGTGCGGCTAAAAGCCGGCGACATGCGCATGGCCCGGCTGCAGATCAGT
CTCTCCCAGCTGCGAACCGCAATGGAGGAGTCGGGCAAGCAGCTGAAGGA
CCTCTGCCAGCAGGTGCGGTTGAATGTGGATGCTGAGTGAAAGCTTTCTA
GACC
BS17336.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:28:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15638-PA | 324 | CG15638-RA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:35:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15638-RA | 488 | CG15638-RA | 58..382 | 17..341 | 1625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13535397..13535721 | 341..17 | 1625 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:34:58 has no hits.
BS17336.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:28:35 Download gff for
BS17336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-PA | 1..324 | 17..340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:44:13 Download gff for
BS17336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 56..389 | 14..349 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:36:22 Download gff for
BS17336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15638-RA | 56..389 | 14..349 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:36:22 Download gff for
BS17336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13535390..13535723 | 14..349 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:44:13 Download gff for
BS17336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13535390..13535723 | 14..349 | 98 | | Minus |
BS17336.pep Sequence
Translation from 16 to 339
> BS17336.pep
MPETKPKTHCRPSNGLDQTEESDTRLAANLVTQRNLQLHPRPQHPRPQRA
RRDATGFTSNQEVRLKAGDMRMARLQISLSQLRTAMEESGKQLKDLCQQV
RLNVDAE*
BS17336.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:53:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15638-PA | 107 | CG15638-PA | 1..107 | 1..107 | 551 | 100 | Plus |
