Clone Sequence Records
BS17351.complete Sequence
359 bp assembled on 2010-02-09
GenBank Submission: KX801203
> BS17351.complete
GAAGTTATCAGTCGACATGAACATGACCGTGGATCCGCGCCGCAAGGAGA
AGATCAACCGCTACAAGGCGCCCAAGAACCAGGGCCAGAGCGGCGGCGCC
AACGAGGACATGATGCCGGATTACATGAACATTCTGGGCATGATTTTCTC
CATGTGTGGACTGATGATGAAGCTCAAGTGGTGCGCCTGGTTTGCGCTGT
ACTGCTCCTGCATTAGTTTCGCCAGTTCTCGGGCCAGCGACGATGCCAAA
CAGGTGCTCTCCTCCTTTATGTTGAGCGTCAGTGCGGTGGTGATGTCCTA
CCTCCAGAATCCCGCTGCCATGACCCCACCATGGGCTTCCTAGAAGCTTT
CTAGACCAT
BS17351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:42:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10674-RA | 327 | CG10674-PA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:42:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10674-RA | 478 | CG10674-RA | 60..386 | 17..343 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:42:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5135840..5136012 | 343..171 | 865 | 100 | Minus |
3L | 28110227 | 3L | 5136078..5136233 | 172..17 | 780 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:42:24 has no hits.
BS17351.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:29 Download gff for
BS17351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 1..327 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:09 Download gff for
BS17351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 1..327 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:33 Download gff for
BS17351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 60..386 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:29 Download gff for
BS17351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 1..327 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:35:11 Download gff for
BS17351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 60..386 | 17..343 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:35:11 Download gff for
BS17351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5135840..5136010 | 173..343 | 100 | <- | Minus |
3L | 5136078..5136233 | 17..172 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:33 Download gff for
BS17351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5128940..5129110 | 173..343 | 100 | <- | Minus |
arm_3L | 5129178..5129333 | 17..172 | 100 | | Minus |
BS17351.3prime Sequence
357 bp (357 high quality bases) assembled on 2007-05-15
> BS17351.3prime
ATGGTCTAGAAAGCTTCTAGGAAGCCCATGGTGGGGTCATGGCAGCGGGA
TTCTGGAGGTAGGACATCACCACCGCACTGACGCTCAACATAAAGGAGGA
GAGCACCTGTTTGGCATCGTCGCTGGCCCGAGAACTGGCGAAACTAATGC
AGGAGCAGTACAGCGCAAACCAGGCGCACCACTTGAGCTTCATCATCAGT
CCACACATGGAGAAAATCATGCCCAGAATGTTCATGTAATCCGGCATCAT
GTCCTCGTTGGCGCCGCCGCTCTGGCCCTGGTTCTTGGGCGCCTTGTAGC
GGTTGATCTTCTCCTTGCGGCGCGGATCCACGGTCATGTTCATGTCGACT
GATAACT
BS17351.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:33:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10674-PA | 327 | CG10674-RA | 1..327 | 343..17 | 1635 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:34:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10674-RA | 478 | CG10674-RA | 60..386 | 343..17 | 1635 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:34:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5135840..5136012 | 17..189 | 865 | 100 | Plus |
3L | 28110227 | 3L | 5136078..5136233 | 188..343 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:34:55 has no hits.
BS17351.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:33:08 Download gff for
BS17351.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-PA | 1..327 | 17..343 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:23:32 Download gff for
BS17351.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 60..390 | 12..343 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:23:34 Download gff for
BS17351.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 60..390 | 12..343 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:23:34 Download gff for
BS17351.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5135836..5136010 | 12..187 | 98 | <- | Plus |
3L | 5136078..5136233 | 188..343 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:23:32 Download gff for
BS17351.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5128936..5129110 | 12..187 | 98 | <- | Plus |
arm_3L | 5129178..5129333 | 188..343 | 100 | | Plus |
BS17351.5prime Sequence
357 bp (357 high quality bases) assembled on 2007-05-15
> BS17351.5prime
GAAGTTATCAGTCGACATGAACATGACCGTGGATCCGCGCCGCAAGGAGA
AGATCAACCGCTACAAGGCGCCCAAGAACCAGGGCCAGAGCGGCGGCGCC
AACGAGGACATGATGCCGGATTACATGAACATTCTGGGCATGATTTTCTC
CATGTGTGGACTGATGATGAAGCTCAAGTGGTGCGCCTGGTTTGCGCTGT
ACTGCTCCTGCATTAGTTTCGCCAGTTCTCGGGCCAGCGACGATGCCAAA
CAGGTGCTCTCCTCCTTTATGTTGAGCGTCAGTGCGGTGGTGATGTCCTA
CCTCCAGAATCCCGCTGCCATGACCCCACCATGGGCTTCCTAGAAGCTTT
CTAGACC
BS17351.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:25:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10674-PA | 327 | CG10674-RA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:50:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10674-RA | 478 | CG10674-RA | 60..386 | 17..343 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:50:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5135840..5136012 | 343..171 | 865 | 100 | Minus |
3L | 28110227 | 3L | 5136078..5136233 | 172..17 | 780 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 02:50:21 has no hits.
BS17351.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:25:46 Download gff for
BS17351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-PA | 1..327 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:02:05 Download gff for
BS17351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 60..390 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:55:00 Download gff for
BS17351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10674-RA | 60..390 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:55:00 Download gff for
BS17351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5135836..5136010 | 173..348 | 98 | <- | Minus |
3L | 5136078..5136233 | 17..172 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:02:05 Download gff for
BS17351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5128936..5129110 | 173..348 | 98 | <- | Minus |
arm_3L | 5129178..5129333 | 17..172 | 100 | | Minus |
BS17351.pep Sequence
Translation from 16 to 342
> BS17351.pep
MNMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLM
MKLKWCAWFALYCSCISFASSRASDDAKQVLSSFMLSVSAVVMSYLQNPA
AMTPPWAS*
BS17351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:55:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10674-PA | 108 | CG10674-PA | 1..108 | 1..108 | 574 | 100 | Plus |