Clone Sequence Records
BS17360.complete Sequence
359 bp assembled on 2010-02-09
GenBank Submission: KX804462
> BS17360.complete
GAAGTTATCAGTCGACATGTCTACCTATCCCAGTGCTTCCGCATCCCAGT
CGACAGGAACCTCTGACCTGGACACCGAGTCCGTGGAAGTTCTGCGGGAG
CGGCTGAGCACCATGAAGCGGCTGATGGCCGAGCGGACGTCCCAGCAGCA
AAACAACCCGGCGACCACGGAGGAGATATTCTCCACCAAGCGCCACCGCT
CGGCGGGCATCATCGATGGAAACTTCCTGAGCATCGCGTTCGGCGGAGCT
CTGCTGGTGATCATCACGGTTTCGGTGTACGCCTTCTACAGTCTCTACCA
TGCCATACTCAAGAAGTTCCCTTCGCGCCACGAGGAGCTGTAAAAGCTTT
CTAGACCAT
BS17360.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:11:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14312-RA | 327 | CG14312-PA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14312-RA | 494 | CG14312-RA | 75..402 | 17..344 | 1640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18283070..18283359 | 344..55 | 1450 | 100 | Minus |
3R | 32079331 | 3R | 18283414..18283454 | 57..17 | 205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:11:41 has no hits.
BS17360.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:28:32 Download gff for
BS17360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 1..327 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:16:22 Download gff for
BS17360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 1..325 | 17..341 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:47 Download gff for
BS17360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 80..404 | 17..341 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:28:33 Download gff for
BS17360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 1..327 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:57 Download gff for
BS17360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 75..399 | 17..341 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:57 Download gff for
BS17360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18283073..18283357 | 57..341 | 100 | <- | Minus |
3R | 18283415..18283454 | 17..56 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:47 Download gff for
BS17360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14108795..14109079 | 57..341 | 100 | <- | Minus |
arm_3R | 14109137..14109176 | 17..56 | 100 | | Minus |
BS17360.3prime Sequence
357 bp (357 high quality bases) assembled on 2007-05-15
> BS17360.3prime
ATGGTCTAGAAAGCTTTTACAGCTCCTCGTGGCGCGAAGGGAACTTCTTG
AGTATGGCATGGTAGAGACTGTAGAAGGCGTACACCGAAACCGTGATGAT
CACCAGCAGAGCTCCGCCGAACGCGATGCTCAGGAAGTTTCCATCGATGA
TGCCCGCCGAGCGGTGGCGCTTGGTGGAGAATATCTCCTCCGTGGTCGCC
GGGTTGTTTTGCTGCTGGGACGTCCGCTCGGCCATCAGCCGCTTCATGGT
GCTCAGCCGCTCCCGCAGAACTTCCACGGACTCGGTGTCCAGGTCAGAGG
TTCCTGTCGACTGGGATGCGGAAGCACTGGGATAGGTAGACATGTCGACT
GATAACT
BS17360.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:36:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14312-PA | 327 | CG14312-RA | 1..327 | 343..17 | 1635 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:24:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14312-RA | 494 | CG14312-RA | 75..402 | 343..16 | 1640 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:24:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18283070..18283359 | 16..305 | 1450 | 100 | Plus |
3R | 32079331 | 3R | 18283414..18283454 | 303..343 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:24:13 has no hits.
BS17360.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:36:50 Download gff for
BS17360.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-PA | 1..327 | 17..343 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:59:45 Download gff for
BS17360.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 80..407 | 16..343 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:03:09 Download gff for
BS17360.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 75..402 | 16..343 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:03:09 Download gff for
BS17360.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18283070..18283357 | 16..303 | 100 | <- | Plus |
3R | 18283415..18283454 | 304..343 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:59:45 Download gff for
BS17360.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14108792..14109079 | 16..303 | 100 | <- | Plus |
arm_3R | 14109137..14109176 | 304..343 | 100 | | Plus |
BS17360.5prime Sequence
357 bp (357 high quality bases) assembled on 2007-05-15
> BS17360.5prime
GAAGTTATCAGTCGACATGTCTACCTATCCCAGTGCTTCCGCATCCCAGT
CGACAGGAACCTCTGACCTGGACACCGAGTCCGTGGAAGTTCTGCGGGAG
CGGCTGAGCACCATGAAGCGGCTGATGGCCGAGCGGACGTCCCAGCAGCA
AAACAACCCGGCGACCACGGAGGAGATATTCTCCACCAAGCGCCACCGCT
CGGCGGGCATCATCGATGGAAACTTCCTGAGCATCGCGTTCGGCGGAGCT
CTGCTGGTGATCATCACGGTTTCGGTGTACGCCTTCTACAGTCTCTACCA
TGCCATACTCAAGAAGTTCCCTTCGCGCCACGAGGAGCTGTAAAAGCTTT
CTAGACC
BS17360.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:29:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14312-PA | 327 | CG14312-RA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:08:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14312-RA | 494 | CG14312-RA | 75..402 | 17..344 | 1640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:08:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18283070..18283359 | 344..55 | 1450 | 100 | Minus |
3R | 32079331 | 3R | 18283414..18283454 | 57..17 | 205 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:08:23 has no hits.
BS17360.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:29:34 Download gff for
BS17360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-PA | 1..327 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:50:15 Download gff for
BS17360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 80..407 | 17..344 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:08:19 Download gff for
BS17360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14312-RA | 75..402 | 17..344 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:08:19 Download gff for
BS17360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18283070..18283357 | 57..344 | 100 | <- | Minus |
3R | 18283415..18283454 | 17..56 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:50:15 Download gff for
BS17360.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14108792..14109079 | 57..344 | 100 | <- | Minus |
arm_3R | 14109137..14109176 | 17..56 | 100 | | Minus |
BS17360.pep Sequence
Translation from 16 to 342
> BS17360.pep
MSTYPSASASQSTGTSDLDTESVEVLRERLSTMKRLMAERTSQQQNNPAT
TEEIFSTKRHRSAGIIDGNFLSIAFGGALLVIITVSVYAFYSLYHAILKK
FPSRHEEL*
BS17360.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:05:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14312-PA | 108 | CG14312-PA | 1..108 | 1..108 | 533 | 100 | Plus |