Clone Sequence Records
BS17362.complete Sequence
326 bp assembled on 2010-02-09
GenBank Submission: KX802773
> BS17362.complete
GAAGTTATCAGTCGACATGTCGGAAAAGAAATATTGGGAGCCGGCAAAGG
CTTTCCGCCCAAAAAACGAGAGGGCGAAAGTAAGTATCTGGCACCAGTCA
TTCACACCGACGTACGAGCAGGAGGAGCCCCAAATGGCACTGCTTCTATC
CTGGCACTACGGTCGCCAGTGGATGGAGGAGCGTGATATACACAGGATGG
AGACCAAGTTGAAGATAAAGAAGGAGGCCAACTTCATTCCACCCAACTAT
ACCAGTTGGCTTGAGAAGCGGAGGGCCATAAAGACTAAGCAACAGCTGAT
CAGATCTTGAAAGCTTTCTAGACCAT
BS17362.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:39:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14659-RA | 294 | CG14659-PA | 1..294 | 17..310 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:39:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14659-RA | 449 | CG14659-RA | 35..328 | 17..310 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:39:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4830970..4831263 | 310..17 | 1470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:39:27 has no hits.
BS17362.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:53:52 Download gff for
BS17362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 1..294 | 17..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:12:50 Download gff for
BS17362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 1..293 | 17..309 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:58 Download gff for
BS17362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 35..327 | 17..309 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:53:52 Download gff for
BS17362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 1..294 | 17..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:33:57 Download gff for
BS17362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 35..327 | 17..309 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:33:57 Download gff for
BS17362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4830971..4831263 | 17..309 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:58 Download gff for
BS17362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 656693..656985 | 17..309 | 100 | | Minus |
BS17362.3prime Sequence
324 bp (324 high quality bases) assembled on 2007-05-15
> BS17362.3prime
ATGGTCTAGAAAGCTTTCAAGATCTGATCAGCTGTTGCTTAGTCTTTATG
GCCCTCCGCTTCTCAAGCCAACTGGTATAGTTGGGTGGAATGAAGTTGGC
CTCCTTCTTTATCTTCAACTTGGTCTCCATCCTGTGTATATCACGCTCCT
CCATCCACTGGCGACCGTAGTGCCAGGATAGAAGCAGTGCCATTTGGGGC
TCCTCCTGCTCGTACGTCGGTGTGAATGACTGGTGCCAGATACTTACTTT
CGCCCTCTCGTTTTTTGGGCGGAAAGCCTTTGCCGGCTCCCAATATTTCT
TTTCCGACATGTCGACTGATAACT
BS17362.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:33:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14659-PA | 294 | CG14659-RA | 1..294 | 310..17 | 1470 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:09:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14659-RA | 449 | CG14659-RA | 35..328 | 310..17 | 1470 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:09:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4830970..4831263 | 17..310 | 1470 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:09:15 has no hits.
BS17362.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:33:26 Download gff for
BS17362.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-PA | 1..294 | 17..310 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:53:34 Download gff for
BS17362.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 30..335 | 7..317 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:08:53 Download gff for
BS17362.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 30..335 | 7..317 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:08:53 Download gff for
BS17362.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4830963..4831268 | 7..317 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:53:34 Download gff for
BS17362.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 656685..656990 | 7..317 | 97 | | Plus |
BS17362.5prime Sequence
324 bp (324 high quality bases) assembled on 2007-05-15
> BS17362.5prime
GAAGTTATCAGTCGACATGTCGGAAAAGAAATATTGGGAGCCGGCAAAGG
CTTTCCGCCCAAAAAACGAGAGGGCGAAAGTAAGTATCTGGCACCAGTCA
TTCACACCGACGTACGAGCAGGAGGAGCCCCAAATGGCACTGCTTCTATC
CTGGCACTACGGTCGCCAGTGGATGGAGGAGCGTGATATACACAGGATGG
AGACCAAGTTGAAGATAAAGAAGGAGGCCAACTTCATTCCACCCAACTAT
ACCAGTTGGCTTGAGAAGCGGAGGGCCATAAAGACTAAGCAACAGCTGAT
CAGATCTTGAAAGCTTTCTAGACC
BS17362.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:26:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14659-PA | 294 | CG14659-RA | 1..294 | 17..310 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:33:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14659-RA | 449 | CG14659-RA | 35..328 | 17..310 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:33:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4830970..4831263 | 310..17 | 1470 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:33:02 has no hits.
BS17362.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:26:04 Download gff for
BS17362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-PA | 1..294 | 17..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:43:40 Download gff for
BS17362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 30..335 | 10..320 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:41:03 Download gff for
BS17362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 30..335 | 10..320 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:41:03 Download gff for
BS17362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4830963..4831268 | 10..320 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:43:40 Download gff for
BS17362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 656685..656990 | 10..320 | 97 | | Minus |
BS17362.pep Sequence
Translation from 16 to 309
> BS17362.pep
MSEKKYWEPAKAFRPKNERAKVSIWHQSFTPTYEQEEPQMALLLSWHYGR
QWMEERDIHRMETKLKIKKEANFIPPNYTSWLEKRRAIKTKQQLIRS*
BS17362.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:51:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14659-PA | 97 | CG14659-PA | 1..97 | 1..97 | 527 | 100 | Plus |
