Clone Sequence Records
BS17366.complete Sequence
389 bp assembled on 2010-02-09
GenBank Submission: KX802300
> BS17366.complete
GAAGTTATCAGTCGACATGTTGATACGTATTAATCCATTGGTGCTGTGCA
TCCTACCGCTGGTCTTCCTCCTCACCGAGGCGAGAACACGGCCCAGTGGT
AACGATCGCATCGTTTTTCCAAAGGATGACGACGATACCAGCTCGAGATT
CACATACTCGACCACAACGACAACTGAGGAACCCGCATCCACAATAGCAC
TCCGTTTGGAAAGTACAAACAGCACAGAACAGATCACCAGCGGATCGGAG
GAGCTGGTTAATGAAAACACCACTGTGCTGCCAGTTATAGACAACCGAAT
ATTGCTGGAGACGACCCAAAAATGTAAGCCTGGCTTTGAGCTGTTCGGAA
AACGATGCAGAAAGCCGGCGTAAAAGCTTTCTAGACCAT
BS17366.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:43:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbp-RA | 357 | CG15917-PA | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:43:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbp-RA | 453 | CG15917-RA | 48..404 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:43:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17136498..17136854 | 17..373 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:43:27 has no hits.
BS17366.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:32 Download gff for
BS17366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15917-RA | 1..357 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:13 Download gff for
BS17366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15917-RA | 47..396 | 22..371 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:47 Download gff for
BS17366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbp-RA | 47..396 | 22..371 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:32 Download gff for
BS17366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15917-RA | 42..401 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:35:34 Download gff for
BS17366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbp-RA | 53..402 | 22..371 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:35:34 Download gff for
BS17366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17136503..17136852 | 22..371 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:47 Download gff for
BS17366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13024008..13024357 | 22..371 | 100 | | Plus |
BS17366.3prime Sequence
387 bp (387 high quality bases) assembled on 2007-05-15
> BS17366.3prime
ATGGTCTAGAAAGCTTTTACGCCGGCTTTCTGCATCGTTTTCCGAACAGC
TCAAAGCCAGGCTTACATTTTTGGGTCGTCTCCAGCAATATTCGGTTGTC
TATAACTGGCAGCACAGTGGTGTTTTCATTAACCAGCTCCTCCGATCCGC
TGGTGATCTGTTCTGTGCTGTTTGTACTTTCCAAACGGAGTGCTATTGTG
GATGCGGGTTCCTCAGTTGTCGTTGTGGTCGAGTATGTGAATCTCGAGCT
GGTATCGTCGTCATCCTTTGGAAAAACGATGCGATCGTTACCACTGGGCC
GTGTTCTCGCCTCGGTGAGGAGGAAGACCAGCGGTAGGATGCACAGCACC
AATGGATTAATACGTATCAACATGTCGACTGATAACT
BS17366.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15917-PA | 357 | CG15917-RA | 1..357 | 373..17 | 1785 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:02:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbp-RA | 453 | CG15917-RA | 48..404 | 373..17 | 1785 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:02:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17136498..17136854 | 373..17 | 1785 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:02:23 has no hits.
BS17366.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:37:13 Download gff for
BS17366.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15917-PA | 1..357 | 17..373 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:29:00 Download gff for
BS17366.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbp-RA | 42..401 | 12..373 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:51:50 Download gff for
BS17366.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbp-RA | 48..407 | 12..373 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:51:50 Download gff for
BS17366.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17136498..17136857 | 12..373 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:29:00 Download gff for
BS17366.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13024003..13024362 | 12..373 | 99 | | Minus |
BS17366.5prime Sequence
387 bp (387 high quality bases) assembled on 2007-05-15
> BS17366.5prime
GAAGTTATCAGTCGACATGTTGATACGTATTAATCCATTGGTGCTGTGCA
TCCTACCGCTGGTCTTCCTCCTCACCGAGGCGAGAACACGGCCCAGTGGT
AACGATCGCATCGTTTTTCCAAAGGATGACGACGATACCAGCTCGAGATT
CACATACTCGACCACAACGACAACTGAGGAACCCGCATCCACAATAGCAC
TCCGTTTGGAAAGTACAAACAGCACAGAACAGATCACCAGCGGATCGGAG
GAGCTGGTTAATGAAAACACCACTGTGCTGCCAGTTATAGACAACCGAAT
ATTGCTGGAGACGACCCAAAAATGTAAGCCTGGCTTTGAGCTGTTCGGAA
AACGATGCAGAAAGCCGGCGTAAAAGCTTTCTAGACC
BS17366.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:29:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15917-PA | 357 | CG15917-RA | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:58:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbp-RA | 453 | CG15917-RA | 48..404 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:58:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17136498..17136854 | 17..373 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 15:58:46 has no hits.
BS17366.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:29:57 Download gff for
BS17366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15917-PA | 1..357 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:20:14 Download gff for
BS17366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbp-RA | 42..401 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:32:10 Download gff for
BS17366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbp-RA | 48..407 | 17..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:32:10 Download gff for
BS17366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17136498..17136857 | 17..378 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:20:14 Download gff for
BS17366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13024003..13024362 | 17..378 | 99 | | Plus |
BS17366.pep Sequence
Translation from 16 to 372
> BS17366.pep
MLIRINPLVLCILPLVFLLTEARTRPSGNDRIVFPKDDDDTSSRFTYSTT
TTTEEPASTIALRLESTNSTEQITSGSEELVNENTTVLPVIDNRILLETT
QKCKPGFELFGKRCRKPA*
BS17366.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbp-PA | 118 | CG15917-PA | 1..118 | 1..118 | 600 | 100 | Plus |
