Clone Sequence Records
BS17374.complete Sequence
338 bp assembled on 2010-02-09
GenBank Submission: KX800646
> BS17374.complete
GAAGTTATCAGTCGACATGAGCGTAACTGCGCTATTGCTCAAGGCTTTGT
TTGTGCTCGGGCTGACCGTACTTTCGGGACCAGGAAGAGTGGCTGCCTAC
GATCCCAATGATCCTAAGATAGCCGAGTGCTGCCTGCCACCGGAGGGGAT
GTTCGAGGCCTTTTATCCCCGTGAGGTGGAGGGAATCCCCAATAGCGCAT
CGCGACCCGCACACGGACATGGCAGCTTCTTCAAGCACCGGAACCCAGCG
CTAGTGGACACCAAGAACGCGGCGGCCTATGGCTATAGGTTCGACGGCAA
GAGGCGTTTCAACTTCGATTAGAAGCTTTCTAGACCAT
BS17374.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:39:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30380-RA | 306 | CG30380-PA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:39:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30380-RA | 459 | CG30380-RA | 102..407 | 17..322 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:39:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7939253..7939558 | 322..17 | 1530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:39:39 has no hits.
BS17374.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:58 Download gff for
BS17374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 1..306 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:12:55 Download gff for
BS17374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 82..387 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:02 Download gff for
BS17374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 102..407 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:56:58 Download gff for
BS17374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 82..396 | 17..329 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:34:02 Download gff for
BS17374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 102..407 | 17..322 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:34:02 Download gff for
BS17374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7939253..7939558 | 17..322 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:02 Download gff for
BS17374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3826758..3827063 | 17..322 | 100 | | Minus |
BS17374.3prime Sequence
336 bp (336 high quality bases) assembled on 2007-05-15
> BS17374.3prime
ATGGTCTAGAAAGCTTCTAATCGAAGTTGAAACGCCTCTTGCCGTCGAAC
CTATAGCCATAGGCCGCCGCGTTCTTGGTGTCCACTAGCGCTGGGTTCCG
GTGCTTGAAGAAGCTGCCATGTCCGTGTGCGGGTCGCGATGCGCTATTGG
GGATTCCCTCCACCTCACGGGGATAAAAGGCCTCGAACATCCCCTCCGGT
GGCAGGCAGCACTCGGCTATCTTAGGATCATTGGGATCGTAGGCAGCCAC
TCTTCCTGGTCCCGAAAGTACGGTCAGCCCGAGCACAAACAAAGCCTTGA
GCAATAGCGCAGTTACGCTCATGTCGACTGATAACT
BS17374.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:33:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30380-PA | 306 | CG30380-RA | 1..306 | 322..17 | 1530 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:09:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30380-RA | 459 | CG30380-RA | 102..407 | 322..17 | 1530 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7939253..7939558 | 17..322 | 1530 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:09:45 has no hits.
BS17374.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:33:54 Download gff for
BS17374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-PA | 1..306 | 17..322 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:53:41 Download gff for
BS17374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 102..416 | 10..322 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:09:50 Download gff for
BS17374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 102..416 | 10..322 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:09:50 Download gff for
BS17374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7939244..7939558 | 10..322 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:53:41 Download gff for
BS17374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3826749..3827063 | 10..322 | 98 | | Plus |
BS17374.5prime Sequence
336 bp (336 high quality bases) assembled on 2007-05-15
> BS17374.5prime
GAAGTTATCAGTCGACATGAGCGTAACTGCGCTATTGCTCAAGGCTTTGT
TTGTGCTCGGGCTGACCGTACTTTCGGGACCAGGAAGAGTGGCTGCCTAC
GATCCCAATGATCCTAAGATAGCCGAGTGCTGCCTGCCACCGGAGGGGAT
GTTCGAGGCCTTTTATCCCCGTGAGGTGGAGGGAATCCCCAATAGCGCAT
CGCGACCCGCACACGGACATGGCAGCTTCTTCAAGCACCGGAACCCAGCG
CTAGTGGACACCAAGAACGCGGCGGCCTATGGCTATAGGTTCGACGGCAA
GAGGCGTTTCAACTTCGATTAGAAGCTTTCTAGACC
BS17374.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:26:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30380-PA | 306 | CG30380-RA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:24:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30380-RA | 459 | CG30380-RA | 102..407 | 17..322 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:24:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7939253..7939558 | 322..17 | 1530 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:24:32 has no hits.
BS17374.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:26:30 Download gff for
BS17374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-PA | 1..306 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:13:50 Download gff for
BS17374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 102..416 | 17..329 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:58:18 Download gff for
BS17374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30380-RA | 102..416 | 17..329 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:58:18 Download gff for
BS17374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7939244..7939558 | 17..329 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:13:50 Download gff for
BS17374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3826749..3827063 | 17..329 | 98 | | Minus |
BS17374.pep Sequence
Translation from 16 to 321
> BS17374.pep
MSVTALLLKALFVLGLTVLSGPGRVAAYDPNDPKIAECCLPPEGMFEAFY
PREVEGIPNSASRPAHGHGSFFKHRNPALVDTKNAAAYGYRFDGKRRFNF
D*
BS17374.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30380-PA | 101 | CG30380-PA | 1..101 | 1..101 | 541 | 100 | Plus |
