Clone Sequence Records
BS17376.complete Sequence
371 bp assembled on 2010-02-09
GenBank Submission: KX800957
> BS17376.complete
GAAGTTATCAGTCGACATGGACACGGATGAGACTAAGGCTGGAACCTCGG
GTCCGGGGACGTACCACGATGAGGTTGACTTTACCAGCGGATACGAGACT
CAGTATAAGAAGGAGTACAGCCCGCTGAAACCGATTTTTGTACCGCCGCC
GGATAAAAAGCACGCCTGGTTTCGCAACTGGTCCACCATACTGATGGTCA
GCTTCCTGTCCGGGGTGTTTATTCTGGGAACCGTGATGCTGGTGGTCCAA
GTTTTCACCGCCAGTCCCCTGCAGATCTTCATGATCGTGGCTATATATGT
GGCTATAGCCGCTGTGATGATTTGGCTGGAGGTGCAGTCTATAAAAGTGC
GGTGAAAGCTTTCTAGACCAT
BS17376.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:42:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15152-RB | 339 | CG15152-PB | 1..339 | 17..355 | 1695 | 100 | Plus |
CG15152-RA | 339 | CG15152-PA | 1..339 | 17..355 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15152-RB | 563 | CG15152-RB | 26..366 | 17..357 | 1705 | 100 | Plus |
CG15152-RA | 674 | CG15152-RA | 137..477 | 17..357 | 1705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:42:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18114683..18115023 | 17..357 | 1705 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:42:20 has no hits.
BS17376.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:06 Download gff for
BS17376.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 1..339 | 17..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:08 Download gff for
BS17376.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 137..474 | 17..354 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:32 Download gff for
BS17376.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 137..474 | 17..354 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:06 Download gff for
BS17376.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 134..477 | 14..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:35:10 Download gff for
BS17376.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 137..474 | 17..354 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:35:10 Download gff for
BS17376.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18114683..18115020 | 17..354 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:32 Download gff for
BS17376.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18114683..18115020 | 17..354 | 100 | | Plus |
BS17376.3prime Sequence
369 bp (369 high quality bases) assembled on 2007-05-15
> BS17376.3prime
ATGGTCTAGAAAGCTTTCACCGCACTTTTATAGACTGCACCTCCAGCCAA
ATCATCACAGCGGCTATAGCCACATATATAGCCACGATCATGAAGATCTG
CAGGGGACTGGCGGTGAAAACTTGGACCACCAGCATCACGGTTCCCAGAA
TAAACACCCCGGACAGGAAGCTGACCATCAGTATGGTGGACCAGTTGCGA
AACCAGGCGTGCTTTTTATCCGGCGGCGGTACAAAAATCGGTTTCAGCGG
GCTGTACTCCTTCTTATACTGAGTCTCGTATCCGCTGGTAAAGTCAACCT
CATCGTGGTACGTCCCCGGACCCGAGGTTCCAGCCTTAGTCTCATCCGTG
TCCATGTCGACTGATAACT
BS17376.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:37:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15152-PA | 339 | CG15152-RA | 1..339 | 355..17 | 1695 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:07:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15152-RB | 563 | CG15152-RB | 26..366 | 355..15 | 1705 | 100 | Minus |
CG15152-RA | 674 | CG15152-RA | 137..477 | 355..15 | 1705 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:07:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18114683..18115023 | 355..15 | 1705 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 21:07:40 has no hits.
BS17376.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:37:22 Download gff for
BS17376.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-PA | 1..339 | 17..355 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:29:34 Download gff for
BS17376.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 134..477 | 15..358 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:55:03 Download gff for
BS17376.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 134..477 | 15..358 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:55:03 Download gff for
BS17376.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18114680..18115023 | 15..358 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:29:34 Download gff for
BS17376.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18114680..18115023 | 15..358 | 99 | | Minus |
BS17376.5prime Sequence
369 bp (369 high quality bases) assembled on 2007-05-15
> BS17376.5prime
GAAGTTATCAGTCGACATGGACACGGATGAGACTAAGGCTGGAACCTCGG
GTCCGGGGACGTACCACGATGAGGTTGACTTTACCAGCGGATACGAGACT
CAGTATAAGAAGGAGTACAGCCCGCTGAAACCGATTTTTGTACCGCCGCC
GGATAAAAAGCACGCCTGGTTTCGCAACTGGTCCACCATACTGATGGTCA
GCTTCCTGTCCGGGGTGTTTATTCTGGGAACCGTGATGCTGGTGGTCCAA
GTTTTCACCGCCAGTCCCCTGCAGATCTTCATGATCGTGGCTATATATGT
GGCTATAGCCGCTGTGATGATTTGGCTGGAGGTGCAGTCTATAAAAGTGC
GGTGAAAGCTTTCTAGACC
BS17376.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:30:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15152-PA | 339 | CG15152-RA | 1..339 | 17..355 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 21:53:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15152-RB | 563 | CG15152-RB | 26..366 | 17..357 | 1705 | 100 | Plus |
CG15152-RA | 674 | CG15152-RA | 137..477 | 17..357 | 1705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 21:53:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18114683..18115023 | 17..357 | 1705 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 21:53:36 has no hits.
BS17376.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:30:06 Download gff for
BS17376.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-PA | 1..339 | 17..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:32:04 Download gff for
BS17376.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 134..477 | 14..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:38:49 Download gff for
BS17376.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15152-RA | 134..477 | 14..357 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:38:49 Download gff for
BS17376.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18114680..18115023 | 14..357 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:32:04 Download gff for
BS17376.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18114680..18115023 | 14..357 | 99 | | Plus |
BS17376.pep Sequence
Translation from 16 to 354
> BS17376.pep
MDTDETKAGTSGPGTYHDEVDFTSGYETQYKKEYSPLKPIFVPPPDKKHA
WFRNWSTILMVSFLSGVFILGTVMLVVQVFTASPLQIFMIVAIYVAIAAV
MIWLEVQSIKVR*
BS17376.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:55:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15152-PB | 112 | CG15152-PB | 1..112 | 1..112 | 583 | 100 | Plus |
CG15152-PA | 112 | CG15152-PA | 1..112 | 1..112 | 583 | 100 | Plus |