Clone Sequence Records
BS17383.complete Sequence
395 bp assembled on 2010-02-09
GenBank Submission: KX801929
> BS17383.complete
GAAGTTATCAGTCGACATGTCGAGCTCTAAACTTGCCCTTCTTATTCTGG
TCATTGCCTGTTTGGTCCTTATCGCATGGGCACGACCCAGGTCGAGATCT
TCAATACTCAATGAGGTCACATCGCTGCCGGCGGAGAGAAGAATGAGCAA
CGAAATCATGGACCAGATATCGCCCATGAGGAGGCCACACAGGAGGGATT
ATTTCGTGAAGAGGCGCCCGGTCATCAGCTCTAGGATGATGATGTCCAGA
AGTCCCTTCCTCGAACGTCTTTACAACGATCCAGTGCCGGAGATTGCACC
AGGTGGAGCCAACTACTTTGGCAATGACGTCCTGCCGCTTTCAACCTACG
AGATCCTGGAACCAGAGTCATTGTATTAGAAGCTTTCTAGACCAT
BS17383.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:43:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14915-RA | 363 | CG14915-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:43:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14915-RA | 506 | CG14915-RA | 27..399 | 9..381 | 1835 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:43:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11071053..11071425 | 9..381 | 1835 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:43:45 has no hits.
BS17383.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:43 Download gff for
BS17383.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:13:14 Download gff for
BS17383.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 6..368 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:51 Download gff for
BS17383.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 35..397 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:44 Download gff for
BS17383.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 1..377 | 12..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:35:39 Download gff for
BS17383.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 35..397 | 17..379 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:35:39 Download gff for
BS17383.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11071061..11071423 | 17..379 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:51 Download gff for
BS17383.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11071061..11071423 | 17..379 | 100 | | Plus |
BS17383.3prime Sequence
393 bp (393 high quality bases) assembled on 2007-05-15
> BS17383.3prime
ATGGTCTAGAAAGCTTCTAATACAATGACTCTGGTTCCAGGATCTCGTAG
GTTGAAAGCGGCAGGACGTCATTGCCAAAGTAGTTGGCTCCACCTGGTGC
AATCTCCGGCACTGGATCGTTGTAAAGACGTTCGAGGAAGGGACTTCTGG
ACATCATCATCCTAGAGCTGATGACCGGGCGCCTCTTCACGAAATAATCC
CTCCTGTGTGGCCTCCTCATGGGCGATATCTGGTCCATGATTTCGTTGCT
CATTCTTCTCTCCGCCGGCAGCGATGTGACCTCATTGAGTATTGAAGATC
TCGACCTGGGTCGTGCCCATGCGATAAGGACCAAACAGGCAATGACCAGA
ATAAGAAGGGCAAGTTTAGAGCTCGACATGTCGACTGATAACT
BS17383.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:37:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14915-PA | 363 | CG14915-RA | 1..363 | 379..17 | 1815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:23:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14915-RA | 506 | CG14915-RA | 27..399 | 387..15 | 1835 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:23:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11071053..11071425 | 387..15 | 1835 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:23:02 has no hits.
BS17383.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:37:36 Download gff for
BS17383.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-PA | 1..363 | 17..379 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:16:03 Download gff for
BS17383.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 27..406 | 8..387 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:11:22 Download gff for
BS17383.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 27..406 | 8..387 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:11:22 Download gff for
BS17383.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11071053..11071432 | 8..387 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:16:03 Download gff for
BS17383.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11071053..11071432 | 8..387 | 98 | | Minus |
BS17383.5prime Sequence
393 bp (393 high quality bases) assembled on 2007-05-15
> BS17383.5prime
GAAGTTATCAGTCGACATGTCGAGCTCTAAACTTGCCCTTCTTATTCTGG
TCATTGCCTGTTTGGTCCTTATCGCATGGGCACGACCCAGGTCGAGATCT
TCAATACTCAATGAGGTCACATCGCTGCCGGCGGAGAGAAGAATGAGCAA
CGAAATCATGGACCAGATATCGCCCATGAGGAGGCCACACAGGAGGGATT
ATTTCGTGAAGAGGCGCCCGGTCATCAGCTCTAGGATGATGATGTCCAGA
AGTCCCTTCCTCGAACGTCTTTACAACGATCCAGTGCCGGAGATTGCACC
AGGTGGAGCCAACTACTTTGGCAATGACGTCCTGCCGCTTTCAACCTACG
AGATCCTGGAACCAGAGTCATTGTATTAGAAGCTTTCTAGACC
BS17383.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:30:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14915-PA | 363 | CG14915-RA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:58:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14915-RA | 506 | CG14915-RA | 27..399 | 9..381 | 1835 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:58:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11071053..11071425 | 9..381 | 1835 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:58:02 has no hits.
BS17383.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:30:21 Download gff for
BS17383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-PA | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:47:20 Download gff for
BS17383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 27..406 | 9..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:26:56 Download gff for
BS17383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14915-RA | 27..406 | 9..388 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:26:56 Download gff for
BS17383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11071053..11071432 | 9..388 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:47:20 Download gff for
BS17383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11071053..11071432 | 9..388 | 98 | | Plus |
BS17383.pep Sequence
Translation from 16 to 378
> BS17383.pep
MSSSKLALLILVIACLVLIAWARPRSRSSILNEVTSLPAERRMSNEIMDQ
ISPMRRPHRRDYFVKRRPVISSRMMMSRSPFLERLYNDPVPEIAPGGANY
FGNDVLPLSTYEILEPESLY*
BS17383.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:56:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14915-PA | 120 | CG14915-PA | 1..120 | 1..120 | 608 | 100 | Plus |