Clone Sequence Records
BS17389.complete Sequence
251 bp assembled on 2010-02-09
GenBank Submission: KX806338
> BS17389.complete
GAAGTTATCAGTCGACATGCCTTGCATATTTAATCCGGGCTACATTGGAC
CCGATCCGCCCTGCTGTGACCCCGATTGCTTGGAGGAGGGCCACTGCACG
GTTCCGGAGTGCGGAGTTTGCCCGGAGTCCCAACTACCCCGATGCAATCC
CGCCCCACAATCCAACAAGGACGCGGCGAAGCAACCACTGGACCAGAAAG
CCCAAAAAGAACCGAAGCTCCGGGAACAGAAGTAGAAGCTTTCTAGACCA
T
BS17389.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:00:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5693-RA | 219 | CG5693-PA | 1..219 | 17..235 | 1095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5693-RA | 590 | CG5693-RA | 156..375 | 16..235 | 1100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18006782..18007001 | 16..235 | 1100 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:00:47 has no hits.
BS17389.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:19 Download gff for
BS17389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 1..219 | 17..235 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:11 Download gff for
BS17389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 105..323 | 17..235 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:53 Download gff for
BS17389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 157..375 | 17..235 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:19 Download gff for
BS17389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 104..323 | 16..235 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:43 Download gff for
BS17389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 157..375 | 17..235 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:43 Download gff for
BS17389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18006783..18007001 | 17..235 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:53 Download gff for
BS17389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18006783..18007001 | 17..235 | 100 | | Plus |
BS17389.5prime Sequence
249 bp (249 high quality bases) assembled on 2007-05-15
> BS17389.5prime
GAAGTTATCAGTCGACATGCCTTGCATATTTAATCCGGGCTACATTGGAC
CCGATCCGCCCTGCTGTGACCCCGATTGCTTGGAGGAGGGCCACTGCACG
GTTCCGGAGTGCGGAGTTTGCCCGGAGTCCCAACTACCCCGATGCAATCC
CGCCCCACAATCCAACAAGGACGCGGCGAAGCAACCACTGGACCAGAAAG
CCCAAAAAGAACCGAAGCTCCGGGAACAGAAGTAGAAGCTTTCTAGACC
BS17389.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:30:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5693-PA | 219 | CG5693-RA | 1..219 | 17..235 | 1095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:40:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5693-RA | 590 | CG5693-RA | 156..375 | 16..235 | 1100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:40:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18006782..18007001 | 16..235 | 1100 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:40:39 has no hits.
BS17389.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:30:45 Download gff for
BS17389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-PA | 1..219 | 17..235 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:51:23 Download gff for
BS17389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 156..375 | 16..235 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:48:45 Download gff for
BS17389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 156..375 | 16..235 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:48:45 Download gff for
BS17389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18006782..18007000 | 16..234 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:51:23 Download gff for
BS17389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18006782..18007000 | 16..234 | 100 | -> | Plus |
BS17389.3prime Sequence
249 bp (249 high quality bases) assembled on 2007-05-15
> BS17389.3prime
ATGGTCTAGAAAGCTTCTACTTCTGTTCCCGGAGCTTCGGTTCTTTTTGG
GCTTTCTGGTCCAGTGGTTGCTTCGCCGCGTCCTTGTTGGATTGTGGGGC
GGGATTGCATCGGGGTAGTTGGGACTCCGGGCAAACTCCGCACTCCGGAA
CCGTGCAGTGGCCCTCCTCCAAGCAATCGGGGTCACAGCAGGGCGGATCG
GGTCCAATGTAGCCCGGATTAAATATGCAAGGCATGTCGACTGATAACT
BS17389.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:37:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5693-PA | 219 | CG5693-RA | 1..219 | 235..17 | 1095 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:12:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5693-RA | 590 | CG5693-RA | 156..375 | 236..17 | 1100 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:12:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18006782..18007001 | 236..17 | 1100 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:12:10 has no hits.
BS17389.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:37:59 Download gff for
BS17389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-PA | 1..219 | 17..235 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:32:30 Download gff for
BS17389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 156..375 | 17..236 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:17:26 Download gff for
BS17389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5693-RA | 156..375 | 17..236 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:17:26 Download gff for
BS17389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18006782..18007000 | 18..236 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:32:30 Download gff for
BS17389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18006782..18007000 | 18..236 | 100 | -> | Minus |
BS17389.pep Sequence
Translation from 16 to 234
> BS17389.pep
MPCIFNPGYIGPDPPCCDPDCLEEGHCTVPECGVCPESQLPRCNPAPQSN
KDAAKQPLDQKAQKEPKLREQK*
BS17389.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5693-PA | 72 | CG5693-PA | 1..72 | 1..72 | 422 | 100 | Plus |