Clone Sequence Records
BS17410.complete Sequence
524 bp assembled on 2010-02-09
GenBank Submission: KX802549
> BS17410.complete
GAAGTTATCAGTCGACATGCTGCGCCAACTACGGTTGACAATGGATATTT
CGGGTTGGATCTTCCTCCCGTGGAGACGCTCCATGTCCAACATGAAGGAC
TCTCCTCCACCGCCACCACCACTGGCCAGCACTTTCAACGACGTGATTGT
GGACTACGAGGACCCGGATTATCTTCCACTGCCGGAGTATCCGGTGCGTC
CAAACGAGCCGTTGGAAACTCGCAAGCAACGGCTTTTGTACCAATCGCGC
AAGCGCGGAATGCTGGAGAACGATCTTCTGCTGAGCACCTTTGCGGCCAA
GCATCTCCAGAACTTCAGCGCCGAGCAGACGGCGCAGTACGACCAGTTGA
TCAACGGGGTCAGCAACGACTGGGATATCTATTACTGGGCCACCGAGGTG
AAGCCCACGCCCAAGGAGTACGACACGGAGATCATGGGGCTGTTGAAGGA
GCACGTCAAGAACGCCGAACGGGTCACGCGACTCCGCCAGCCGGATCTGA
ATATTTAGAAGCTTTCTAGACCAT
BS17410.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:11:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14757-RA | 492 | CG14757-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
CG12895-RB | 471 | CG12895-PB | 115..365 | 146..396 | 565 | 81.7 | Plus |
CG12895-RA | 471 | CG12895-PA | 115..365 | 146..396 | 565 | 81.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14757-RA | 739 | CG14757-RA | 117..608 | 17..508 | 2460 | 100 | Plus |
CG12895-RB | 667 | CG12895-RB | 160..410 | 146..396 | 565 | 81.7 | Plus |
CG12895-RA | 593 | CG12895-RA | 160..410 | 146..396 | 565 | 81.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8172495..8172772 | 508..231 | 1390 | 100 | Minus |
2R | 25286936 | 2R | 8173172..8173370 | 232..34 | 995 | 100 | Minus |
2R | 25286936 | 2R | 10436855..10436997 | 396..254 | 415 | 86 | Minus |
Blast to na_te.dros performed 2014-11-28 03:11:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2226..2298 | 113..41 | 112 | 64.9 | Minus |
BS17410.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:28:25 Download gff for
BS17410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 1..492 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:16:14 Download gff for
BS17410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 117..608 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:33 Download gff for
BS17410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 117..608 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:28:25 Download gff for
BS17410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 113..610 | 9..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:46 Download gff for
BS17410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 117..608 | 17..508 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:46 Download gff for
BS17410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8173173..8173369 | 35..231 | 100 | <- | Minus |
2R | 8173480..8173497 | 17..34 | 100 | | Minus |
2R | 8172495..8172771 | 232..508 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:33 Download gff for
BS17410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4060678..4060874 | 35..231 | 100 | <- | Minus |
arm_2R | 4060985..4061002 | 17..34 | 100 | | Minus |
arm_2R | 4060000..4060276 | 232..508 | 100 | <- | Minus |
BS17410.5prime Sequence
522 bp (522 high quality bases) assembled on 2007-05-22
> BS17410.5prime
GAAGTTATCAGTCGACATGCTGCGCCAACTACGGTTGACAATGGATATTT
CGGGTTGGATCTTCCTCCCGTGGAGACGCTCCATGTCCAACATGAAGGAC
TCTCCTCCACCGCCACCACCACTGGCCAGCACTTTCAACGACGTGATTGT
GGACTACGAGGACCCGGATTATCTTCCACTGCCGGAGTATCCGGTGCGTC
CAAACGAGCCGTTGGAAACTCGCAAGCAACGGCTTTTGTACCAATCGCGC
AAGCGCGGAATGCTGGAGAACGATCTTCTGCTGAGCACCTTTGCGGCCAA
GCATCTCCAGAACTTCAGCGCCGAGCAGACGGCGCAGTACGACCAGTTGA
TCAACGGGGTCAGCAACGACTGGGATATCTATTACTGGGCCACCGAGGTG
AAGCCCACGCCCAAGGAGTACGACACGGAGATCATGGGGCTGTTGAAGGA
GCACGTCAAGAACGCCGAACGGGTCACGCGACTCCGCCAGCCGGATCTGA
ATATTTAGAAGCTTTCTAGACC
BS17410.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:11:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14757-PA | 492 | CG14757-RA | 1..492 | 17..508 | 2460 | 100 | Plus |
CG12895-PA | 471 | CG12895-RA | 289..347 | 320..378 | 145 | 89.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:43:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14757-RA | 739 | CG14757-RA | 117..608 | 17..508 | 2460 | 100 | Plus |
CG12895-RB | 667 | CG12895-RB | 160..410 | 146..396 | 565 | 82.1 | Plus |
CG12895-RA | 593 | CG12895-RA | 160..410 | 146..396 | 565 | 82.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:43:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8172495..8172772 | 508..231 | 1390 | 100 | Minus |
2R | 25286936 | 2R | 8173172..8173370 | 232..34 | 995 | 100 | Minus |
2R | 25286936 | 2R | 10436855..10436997 | 396..254 | 415 | 86 | Minus |
Blast to na_te.dros performed 2015-02-11 22:43:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2226..2298 | 113..41 | 112 | 64.9 | Minus |
BS17410.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:11:30 Download gff for
BS17410.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-PA | 1..492 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.3.fasta performed 2008-04-10 09:01:53 Download gff for
BS17410.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 113..610 | 9..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 08:55:41 Download gff for
BS17410.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 113..610 | 9..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:21:22 Download gff for
BS17410.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 113..610 | 9..512 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:21:22 Download gff for
BS17410.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8172493..8172771 | 232..512 | 99 | <- | Minus |
2R | 8173173..8173369 | 35..231 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 08:55:41 Download gff for
BS17410.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4059998..4060276 | 232..512 | 99 | <- | Minus |
arm_2R | 4060678..4060874 | 35..231 | 100 | <- | Minus |
BS17410.3prime Sequence
522 bp (522 high quality bases) assembled on 2007-05-15
> BS17410.3prime
ATGGTCTAGAAAGCTTCTAAATATTCAGATCCGGCTGGCGGAGTCGCGTG
ACCCGTTCGGCGTTCTTGACGTGCTCCTTCAACAGCCCCATGATCTCCGT
GTCGTACTCCTTGGGCGTGGGCTTCACCTCGGTGGCCCAGTAATAGATAT
CCCAGTCGTTGCTGACCCCGTTGATCAACTGGTCGTACTGCGCCGTCTGC
TCGGCGCTGAAGTTCTGGAGATGCTTGGCCGCAAAGGTGCTCAGCAGAAG
ATCGTTCTCCAGCATTCCGCGCTTGCGCGATTGGTACAAAAGCCGTTGCT
TGCGAGTTTCCAACGGCTCGTTTGGACGCACCGGATACTCCGGCAGTGGA
AGATAATCCGGGTCCTCGTAGTCCACAATCACGTCGTTGAAAGTGCTGGC
CAGTGGTGGTGGCGGTGGAGGAGAGTCCTTCATGTTGGACATGGAGCGTC
TCCACGGGAGGAAGATCCAACCCGAAATATCCATTGTCAACCGTAGTTGG
CGCAGCATGTCGACTGATAACT
BS17410.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:38:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14757-PA | 492 | CG14757-RA | 1..492 | 508..17 | 2460 | 100 | Minus |
CG12895-PA | 471 | CG12895-RA | 289..347 | 205..147 | 145 | 89.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:52:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14757-RA | 739 | CG14757-RA | 117..608 | 508..17 | 2460 | 100 | Minus |
CG12895-RB | 667 | CG12895-RB | 160..410 | 379..129 | 565 | 82.1 | Minus |
CG12895-RA | 593 | CG12895-RA | 160..410 | 379..129 | 565 | 82.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:52:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8172495..8172772 | 17..294 | 1390 | 100 | Plus |
2R | 25286936 | 2R | 8173172..8173370 | 293..491 | 995 | 100 | Plus |
2R | 25286936 | 2R | 10436855..10436997 | 129..271 | 415 | 86 | Plus |
Blast to na_te.dros performed 2015-02-10 20:52:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2226..2298 | 412..484 | 112 | 64.9 | Plus |
BS17410.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:38:53 Download gff for
BS17410.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-PA | 1..492 | 17..508 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:10:50 Download gff for
BS17410.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 113..610 | 13..516 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:38 Download gff for
BS17410.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14757-RA | 113..610 | 13..516 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:38 Download gff for
BS17410.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8172493..8172771 | 13..293 | 99 | <- | Plus |
2R | 8173173..8173369 | 294..490 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:10:50 Download gff for
BS17410.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4059998..4060276 | 13..293 | 99 | <- | Plus |
arm_2R | 4060678..4060874 | 294..490 | 100 | <- | Plus |
BS17410.pep Sequence
Translation from 16 to 507
> BS17410.pep
MLRQLRLTMDISGWIFLPWRRSMSNMKDSPPPPPPLASTFNDVIVDYEDP
DYLPLPEYPVRPNEPLETRKQRLLYQSRKRGMLENDLLLSTFAAKHLQNF
SAEQTAQYDQLINGVSNDWDIYYWATEVKPTPKEYDTEIMGLLKEHVKNA
ERVTRLRQPDLNI*
BS17410.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14757-PA | 163 | CG14757-PA | 1..163 | 1..163 | 872 | 100 | Plus |
CG12895-PB | 156 | CG12895-PB | 39..156 | 44..161 | 536 | 82.2 | Plus |
CG12895-PA | 156 | CG12895-PA | 39..156 | 44..161 | 536 | 82.2 | Plus |