Clone Sequence Records
BS17525.complete Sequence
905 bp assembled on 2010-02-09
GenBank Submission: KX803209
> BS17525.complete
GAAGTTATCAGTCGACATGTTAGGAGGCAGTTTAAGAAATGACTGGGTCA
TCTATCCACCAGCCCTCCAGCTTCTCAACTTTCCTTTGCCACAGCAGCAA
GAGCAGGCTCCTGGAACTTTGGTTCGATACGAGCATCCTTCGATACACCA
GCTTCGCTTAGCACCCCGTAGATTAAGGGCACGACGTTCGGTTGTGGAAG
GCGAAGGCTCCAGAGGACTGGACAACGGAAATGGCGACTCGTCGAAAATA
ATATTTGTGCGGCGCTGCTACATGATGGCTGGATTGTTTTCGACTACAAC
TGCGATCCTTGCCATAATCCTGTCCAAGGTAATTCCTCCGGAGGCAGATC
TTATAATGGCAGGATTCATAAGTGCAATGGTGTCCCTAATGTTTCTCTTT
GTCTTCTGTATTTTGACCAAGTTGCGGAGTTTTTATTGGTATAGTTTCAT
CATGGCCGGGTTGTTTGTAAGTCTGGCAGGTTTGGGCGTTATTCTGCTTC
TCCTGGAGCGGAACCTTTCCCGCGTGTGCATTGCCCTTCTGGTGGCCTCC
GCCATGACTGTGATATGCTATTTCGCTGGCGCATGGATACCCAAGATCAT
CCTCCCCGGAGAGAGGACCATGTTCCTCCTGCTCGTCATTTTCGTGATGT
CCTCAATCTTTGTGATGACCATGTATATCTTCACAGACAATTGGATCTAC
CAGTTGGTGTACTTCACGTTATTGGCCACTTTGCTAATACCCGCATCCGT
TTACCATGCTCAGGTGGTTCATTCCAGGCGATTCCAGCTGCCCGATTACG
AATTCGTTATTTGCGCCGTCAACATCTATCTGCACTTTCTGTTGTTCTTT
GCGGCCTTTTACTTTGTCATCTGGGCTCCCAAATGGTGAAAGCTTTCTAG
ACCAT
BS17525.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32986-RA | 873 | CG32986-PA | 1..873 | 17..889 | 4365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32986-RA | 968 | CG32986-RA | 32..904 | 17..889 | 4365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8862807..8863679 | 17..889 | 4365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:05:03 has no hits.
BS17525.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:25:15 Download gff for
BS17525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:46 Download gff for
BS17525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 6..872 | 22..888 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:45 Download gff for
BS17525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 37..903 | 22..888 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:25:15 Download gff for
BS17525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:19 Download gff for
BS17525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 37..903 | 22..888 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:19 Download gff for
BS17525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8862812..8863678 | 22..888 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:45 Download gff for
BS17525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8862812..8863678 | 22..888 | 100 | | Plus |
BS17525.3prime Sequence
821 bp (820 high quality bases) assembled on 2007-05-15
> BS17525.3prime
ATGGTCTAGAAAGCTTTCACCATTTGGGAGCCCAGATGACAAAGTAAAAG
GCCGCAAAGAACAACAGAAAGTGCAGATAGATGTTGACGGCGCAAATAAC
GAATTCGTAATCGGGCAGCTGGAATCGCCTGGAATGAACCACCTGAGCAT
GGTAAACGGATGCGGGTATTAGCAAAGTGGCCAATAACGTGAAGTACACC
AACTGGTAGATCCAATTGTCTGTGAAGATATACATGGTCATCACAAAGAT
TGAGGACATCACGAAAATGACGAGCAGGAGGAACATGGTCCTCTCTCCGG
GGAGGATGATCTTGGGTATCCATGCGCCAGCGAAATAGCATATCACAGTC
ATGGCGGAGGCCACCAGAAGGGCAATGCACACGCGGGAAAGGTTCCGCTC
CAGGAGAAGCAGAATAACGCCCAAACCTGCCAGACTTACAAACAACCCGG
CCATGATGAAACTATACCAATAAAAACTCCGCAACTTGGTCAAAATACAG
AAGACAAAGAGAAACATTAGGGACACCATTGCACTTATGAATCCTGCCAT
TATAAGATCTGCCTCCGGAGGAATTACCTTGGACAGGATTATGGCAAGGA
TCGCAGTTGTAGTCGAAAACAATCCAGCCATCATGTAGCAGCGCCGCACA
AATATTATTTTCGACGAGTCGCCATTTCCGTTGTCCAGTCCTCTGGAGCC
TTCGCCTTCCACAACCGAACGTCGTGCCCTTAATCTACGGGGTGCTAAGC
GAAGCTGGTGTATCGAAGGATGCTCGTATCGAACCAAAGTTCCAGGAGCC
TGCTCTTGCTGCTGTGGCAAA
BS17525.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:48:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32986-PA | 873 | CG32986-RA | 69..873 | 821..17 | 4025 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:22:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32986-RA | 968 | CG32986-RA | 100..904 | 821..17 | 4025 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:22:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8862875..8863679 | 821..17 | 4025 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:22:21 has no hits.
BS17525.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:48:10 Download gff for
BS17525.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-PA | 72..873 | 17..818 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:49:52 Download gff for
BS17525.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 103..913 | 6..818 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:40:45 Download gff for
BS17525.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 103..913 | 6..818 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:40:45 Download gff for
BS17525.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8862878..8863688 | 6..818 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:49:52 Download gff for
BS17525.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8862878..8863688 | 6..818 | 99 | | Minus |
BS17525.5prime Sequence
885 bp (783 high quality bases) assembled on 2007-05-15
> BS17525.5prime
GAAGTTATCAGTCGACATGTTAGGAGGCAGTTTAAGAAATGACTGGGTCA
TCTATCCACCAGCCCTCCAGCTTCTCAACTTTCCTTTGCCACAGCAGCAA
GAGCAGGCTCCTGGAACTTTGGTTCGATACGAGCATCCTTCGATACACCA
GCTTCGCTTAGCACCCCGTAGATTAAGGGCACGACGTTCGGTTGTGGAAG
GCGAAGGCTCCAGAGGACTGGACAACGGAAATGGCGACTCGTCGAAAATA
ATATTTGTGCGGCGCTGCTACATGATGGCTGGATTGTTTTCGACTACAAC
TGCGATCCTTGCCATAATCCTGTCCAAGGTAATTCCTCCGGAGGCAGATC
TTATAATGGCAGGATTCATAAGTGCAATGGTGTCCCTAATGTTTCTCTTT
GTCTTCTGTATTTTGACCAAGTTGCGGAGTTTTTATTGGTATAGTTTCAT
CATGGCCGGGTTGTTTGTAAGTCTGGCAGGTTTGGGCGTTATTCTGCTTC
TCCTGGAGCGGAACCTTTCCCGCGTGTGCATTGCCCTTCTGGTGGCCTCC
GCCATGACTGTGATATGCTATTTCGCTGGCGCATGGATACCCAAGATCAT
CCTCCCCGGAGAGAGGACCATGTTCCTCCTGCTCGTCATTTTCGTGATGT
CCTCAATCTTTGTGATGACCATGTATATCTTCACAGACAATTGGATCTAC
CAGTTGGTGTACTTCACGTTATTGGCCACTTTGCTAATACCCGCATCCGT
TTACCATGCTCAGGTGGTTCATTCCAGGCGATTCCAGCTGCCCGATTACG
AATTCGTTATTTGCGCCGTCAACATCTATCTGCACTTTCTGGTGTTCTTT
GCGGCCTTTTACTTTGTCATCTGGGCTCCCAAATG
BS17525.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:42:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32986-PA | 873 | CG32986-RA | 1..869 | 17..885 | 4320 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:37:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32986-RA | 968 | CG32986-RA | 32..900 | 17..885 | 4330 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:37:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8862807..8863675 | 17..885 | 4330 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:37:02 has no hits.
BS17525.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:42:13 Download gff for
BS17525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-PA | 1..869 | 17..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:48:28 Download gff for
BS17525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 32..900 | 17..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:13:00 Download gff for
BS17525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32986-RA | 32..900 | 17..885 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:13:00 Download gff for
BS17525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8862807..8863675 | 17..885 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:48:28 Download gff for
BS17525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8862807..8863675 | 17..885 | 99 | | Plus |
BS17525.pep Sequence
Translation from 16 to 888
> BS17525.pep
MLGGSLRNDWVIYPPALQLLNFPLPQQQEQAPGTLVRYEHPSIHQLRLAP
RRLRARRSVVEGEGSRGLDNGNGDSSKIIFVRRCYMMAGLFSTTTAILAI
ILSKVIPPEADLIMAGFISAMVSLMFLFVFCILTKLRSFYWYSFIMAGLF
VSLAGLGVILLLLERNLSRVCIALLVASAMTVICYFAGAWIPKIILPGER
TMFLLLVIFVMSSIFVMTMYIFTDNWIYQLVYFTLLATLLIPASVYHAQV
VHSRRFQLPDYEFVICAVNIYLHFLLFFAAFYFVIWAPKW*
BS17525.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:02:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32986-PA | 290 | CG32986-PA | 1..290 | 1..290 | 1492 | 100 | Plus |
