Clone Sequence Records
BS17526.complete Sequence
887 bp assembled on 2010-02-09
GenBank Submission: KX802783
> BS17526.complete
GAAGTTATCAGTCGACATGTTATCGCCGCTTTTCCTGCTGCCCCTCTTGG
CTTTGGCCGGAGCGGCTAAACTTCCGCACATTCAACACCTGACATTGAGG
GATACAGAACAAGTTCACGCAGAGATCCAGCCCCTGATTATAGATGGCTA
CGATGTGCAGGGGGTGGACAATGTGCCCTACCTGGTGTCCCTGTCCTTGA
CAAGGGCCACCTATACCCACTTGTGCGGGGCATCCATCATTGGCAAACGA
TGGCTCCTGACGGCTGCTCATTGTGTCGATGAACTGCGCACCTTCAACGG
AGATGCCGTAGGAACACCCGTTTACGCTGGAATCATCAACCGGTCGAACG
TGACGGCCGCCCAAGTGCGCTACGTCGACTTCGCCTCAACGCATCGGTCT
TTCAATGGAAACGCCGGAAGTGACAATATAGCCTTGCTCCACGTCTCTGA
GAGCTTCGAGTACAACGCTCGAGTTCAGCAGATCGCCCTGCCCGACATCA
ATGATGATTACAGCAATAAGACAGCTGCTGCTTATGGCTGGGGACTCACC
GACCCCGATGGCGACGAGTACTCCAAAGAGTTGCAGTATGCCTTCGCTCC
CCTACTCAATAGCACGGGTTGCAAGGAGTTGCTGCCCGCAGACGCTCCTC
TGACGGCGCAGCAGGTGTGCTCTCAGGTAAAGACCTGCTACGGAGACGGA
GGCACTCCCCTGATCTACTGGCCCATCACTGGACCGGCGGAGTTGGTGGG
CCTCGGATCCTGGAGCTATATGCCGTGCGGATATGCCAATCGGCCAACGG
TGTACACCTCTGTACCCCCTTACATTGGATGGATCCACCAAACGATCGGC
GCCTACTACCAGCTTAACTGAAAGCTTTCTAGACCAT
BS17526.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:04:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33127-RA | 855 | CG33127-PA | 1..855 | 17..871 | 4275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33127-RA | 991 | CG33127-RA | 31..885 | 17..871 | 4275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 322131..322985 | 17..871 | 4275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:04:54 has no hits.
BS17526.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:23:45 Download gff for
BS17526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 1..855 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:44 Download gff for
BS17526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 6..854 | 22..870 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:41 Download gff for
BS17526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 36..884 | 22..870 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:23:45 Download gff for
BS17526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 1..855 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:15 Download gff for
BS17526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 36..884 | 22..870 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:15 Download gff for
BS17526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 322136..322984 | 22..870 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:41 Download gff for
BS17526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 322136..322984 | 22..870 | 100 | | Plus |
BS17526.3prime Sequence
885 bp (819 high quality bases) assembled on 2007-05-15
> BS17526.3prime
ATGGTCTAGAAAGCTTTCAGTTAAGCTGGTAGTAGGCGCCGATCGTTTGG
TGGATCCATCCAATGTAAGGGGGTACAGAGGTGTACACCGTTGGCCGATT
GGCATATCCGCACGGCATATAGCTCCAGGATCCGAGGCCCACCAACTCCG
CCGGTCCAGTGATGGGCCAGTAGATCAGGGGAGTGCCTCCGTCTCCGTAG
CAGGTCTTTACCTGAGAGCACACCTGCTGCGCCGTCAGAGGAGCGTCTGC
GGGCAGCAACTCCTTGCAACCCGTGCTATTGAGTAGGGGAGCGAAGGCAT
ACTGCAACTCTTTGGAGTACTCGTCGCCATCGGGGTCGGTGAGTCCCCAG
CCATAAGCAGCAGCTGTCTTATTGCTGTAATCATCATTGATGTCGGGCAG
GGCGATCTGCTGAACTCGAGCGTTGTACTCGAAGCTCTCAGAGACGTGGA
GCAAGGCTATATTGTCACTTCCGGCGTTTCCATTGAAAGACCGATGCGTT
GAGGCGAAGTCGACGTAGCGCACTTGGGCGGCCGTCACGTTCGACCGGTT
GATGATTCCAGCGTAAACGGGTGTTCCTACGGCATCTCCGTTGAAGGTGC
GCAGTTCATCGACACAATGAGCAGCCGTCAGGAGCCATCGTTTGCCAATG
ATGGATGCCCCGCACAAGTGGGTATAGGTGGCCCTTGTCAAGGACAGGGA
CACCAGGTAGGGCACATTGTCCACCCCCTGCACATCGTAGCCATCTATAA
TCAGGGGCTGGATCTCTGCGTGAACTTGTTCTGTATCCCTCAATGTCANG
TGTTGAATGTGCGGAAGTTTAGCCCCTCCGGCCAAAGCCAAGAGGGGCAG
CAGGAAAAGCGGCGATAACATGTCGACTGATAACT
BS17526.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:48:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33127-PA | 855 | CG33127-RA | 1..855 | 871..17 | 4231 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:57:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33127-RA | 991 | CG33127-RA | 31..885 | 871..17 | 4249 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:57:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 322131..322985 | 871..17 | 4249 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:57:31 has no hits.
BS17526.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:48:19 Download gff for
BS17526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-PA | 1..855 | 17..871 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:35:07 Download gff for
BS17526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 21..888 | 14..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:26:21 Download gff for
BS17526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 21..888 | 14..885 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:21 Download gff for
BS17526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 322121..322988 | 14..885 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:35:07 Download gff for
BS17526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 322121..322988 | 14..885 | 99 | | Minus |
BS17526.5prime Sequence
886 bp (812 high quality bases) assembled on 2007-05-15
> BS17526.5prime
GAAGTTATCAGTCGACATGTTATCGCCGCTTTTCCTGCTGCCCCTCTTGG
CTTTGGCCGGAGCGGCTAAACTTCCGCACATTCAACACCTGACATTGAGG
GATACAGAACAAGTTCACGCAGAGATCCAGCCCCTGATTATAGATGGCTA
CGATGTGCAGGGGGTGGACAATGTGCCCTACCTGGTGTCCCTGTCCTTGA
CAAGGGCCACCTATACCCACTTGTGCGGGGCATCCATCATTGGCAAACGA
TGGCTCCTGACGGCTGCTCATTGTGTCGATGAACTGCGCACCTTCAACGG
AGATGCCGTAGGAACACCCGTTTACGCTGGAATCATCAACCGGTCGAACG
TGACGGCCGCCCAAGTGCGCTACGTCGACTTCGCCTCAACGCATCGGTCT
TTCAATGGAAACGCCGGAAGTGACAATATAGCCTTGCTCCACGTCTCTGA
GAGCTTCGAGTACAACGCTCGAGTTCAGCAGATCGCCCTGCCCGACATCA
ATGATGATTACAGCAATAAGACAGCTGCTGCTTATGGCTGGGGACTCACC
GACCCCGATGGCGACGAGTACTCCAAAGAGTTGCAGTATGCCTTCGCTCC
CCTACTCAATAGCACGGGTTGCAAGGAGTTGCTGCCCGCAGACGCTCCTC
TGACGGCGCAGCAGGTGTGCTCTCAGGTAAAGACCTGCTACGGAGACGGA
GGCACTCCCCTGATCTACTGGCCCATCACTGGACCGGCGGAGTTGGTGGG
CCTCGGATCCTGGAGCTATATGCCGTGCGGATATGCCAATCGGCCAACGG
TGTACACCTCTGTACCCCCTTACATTGGATGGATCCACCAAACGATCGGC
GCCTACTACCAGCTTAACTGAAAGCTTTCTAGACCA
BS17526.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:42:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33127-PA | 855 | CG33127-RA | 1..855 | 17..871 | 4275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:38:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33127-RA | 991 | CG33127-RA | 31..885 | 17..871 | 4275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:38:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 322131..322985 | 17..871 | 4275 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:38:32 has no hits.
BS17526.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:42:22 Download gff for
BS17526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-PA | 1..855 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:19:54 Download gff for
BS17526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 23..888 | 6..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:17:39 Download gff for
BS17526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 23..888 | 6..874 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:17:39 Download gff for
BS17526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 322123..322988 | 6..874 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:19:54 Download gff for
BS17526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 322123..322988 | 6..874 | 99 | | Plus |
BS17526.pep Sequence
Translation from 16 to 870
> BS17526.pep
MLSPLFLLPLLALAGAAKLPHIQHLTLRDTEQVHAEIQPLIIDGYDVQGV
DNVPYLVSLSLTRATYTHLCGASIIGKRWLLTAAHCVDELRTFNGDAVGT
PVYAGIINRSNVTAAQVRYVDFASTHRSFNGNAGSDNIALLHVSESFEYN
ARVQQIALPDINDDYSNKTAAAYGWGLTDPDGDEYSKELQYAFAPLLNST
GCKELLPADAPLTAQQVCSQVKTCYGDGGTPLIYWPITGPAELVGLGSWS
YMPCGYANRPTVYTSVPPYIGWIHQTIGAYYQLN*
BS17526.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:02:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33127-PA | 284 | CG33127-PA | 1..284 | 1..284 | 1516 | 100 | Plus |
| CG11911-PA | 277 | CG11911-PA | 26..276 | 35..283 | 451 | 37.8 | Plus |
| yip7-PA | 270 | CG6457-PA | 3..269 | 5..278 | 281 | 30.7 | Plus |
| CG7142-PA | 334 | CG7142-PA | 90..327 | 52..277 | 260 | 28 | Plus |
| CG10472-PA | 290 | CG10472-PA | 36..284 | 32..278 | 256 | 29.7 | Plus |
