Clone Sequence Records
BS17531.complete Sequence
755 bp assembled on 2010-02-09
GenBank Submission: KX806230
> BS17531.complete
GAAGTTATCAGTCGACATGACGACGCACTTCAGCAATGTACTGCGGCAGG
CATTCAAAACGTTCGACCGGGCAAATCACGCCAGCTTCAATGCGAATTTG
CAGCATCTGCGTCAATTGACGGATGAGCTGACCTACCGGGATCTGCACCT
CCGCGAGGAGCTCTTTCGCAACGTGGGAAGCCATCGGGCACCCTGCAGCT
ACATGCATATATTCGAGGATGATCGCTTCTCCATGAGCCTGTTTATAGTG
CGCGGAGCGAGCACTATTCCCTTGCACGATCACCCCATGATGTTCGGTCT
GCTGCGCTGCATCTGGGGTCAGCTAATGGTGGACAGCTTTTCGCACCAGT
TAGGCCCGGATGAGCCGCTCACCTATGACCCCCATCAAACAGTGGTGAAG
GTGAATGTCGAGGAACCCAAATTGGTCACGCCGGCTAGTCCGTGTGCCAC
ATTGACTCCTAGAAAGAGAAATTACCACCAGATTGCCCAAATTGGTAGCG
GCGTAGCCGCTTTCTTCGACATTCTTAGTCCGCCATACGATGCGGATATG
CCAACATATGGACCGCGACAGTGTCGCTTCTATCGCGCCACGGCAGAGGG
CAGCCAGGTGCAGCTGCACTGCATCCCATCACCGGATACATACTATTGCG
ATGTTGTGGACACGCCCGAATCGGTGATGCAGGCCGCTTTTCAGTGCGCC
GACGAGGTCTATGCCGATAATGCCAGCGGGACACAGTGAAAGCTTTCTAG
ACCAT
BS17531.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:12:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7550-RA | 723 | CG7550-PA | 1..723 | 17..739 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7550-RA | 920 | CG7550-RA | 73..795 | 17..739 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8123737..8124459 | 739..17 | 3615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:12:48 has no hits.
BS17531.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:11 Download gff for
BS17531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 1..723 | 17..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:16:37 Download gff for
BS17531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 73..794 | 17..738 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:15 Download gff for
BS17531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 73..794 | 17..738 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:11 Download gff for
BS17531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 73..795 | 17..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:18 Download gff for
BS17531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 73..794 | 17..738 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:18 Download gff for
BS17531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8123738..8124459 | 17..738 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:15 Download gff for
BS17531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8116838..8117559 | 17..738 | 100 | | Minus |
BS17531.3prime Sequence
753 bp (753 high quality bases) assembled on 2007-05-15
> BS17531.3prime
ATGGTCTAGAAAGCTTTCACTGTGTCCCGCTGGCATTATCGGCATAGACC
TCGTCGGCGCACTGAAAAGCGGCCTGCATCACCGATTCGGGCGTGTCCAC
AACATCGCAATAGTATGTATCCGGTGATGGGATGCAGTGCAGCTGCACCT
GGCTGCCCTCTGCCGTGGCGCGATAGAAGCGACACTGTCGCGGTCCATAT
GTTGGCATATCCGCATCGTATGGCGGACTAAGAATGTCGAAGAAAGCGGC
TACGCCGCTACCAATTTGGGCAATCTGGTGGTAATTTCTCTTTCTAGGAG
TCAATGTGGCACACGGACTAGCCGGCGTGACCAATTTGGGTTCCTCGACA
TTCACCTTCACCACTGTTTGATGGGGGTCATAGGTGAGCGGCTCATCCGG
GCCTAACTGGTGCGAAAAGCTGTCCACCATTAGCTGACCCCAGATGCAGC
GCAGCAGACCGAACATCATGGGGTGATCGTGCAAGGGAATAGTGCTCGCT
CCGCGCACTATAAACAGGCTCATGGAGAAGCGATCATCCTCGAATATATG
CATGTAGCTGCAGGGTGCCCGATGGCTTCCCACGTTGCGAAAGAGCTCCT
CGCGGAGGTGCAGATCCCGGTAGGTCAGCTCATCCGTCAATTGACGCAGA
TGCTGCAAATTCGCATTGAAGCTGGCGTGATTTGCCCGGTCGAACGTTTT
GAATGCCTGCCGCAGTACATTGCTGAAGTGCGTCGTCATGTCGACTGATA
ACT
BS17531.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:48:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7550-PA | 723 | CG7550-RA | 1..723 | 739..17 | 3615 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:54:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7550-RA | 920 | CG7550-RA | 73..795 | 739..17 | 3615 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:54:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8123737..8124459 | 17..739 | 3615 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 20:54:50 has no hits.
BS17531.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:48:14 Download gff for
BS17531.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-PA | 1..723 | 17..739 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:36:35 Download gff for
BS17531.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 73..795 | 17..739 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:36:45 Download gff for
BS17531.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 73..795 | 17..739 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:36:45 Download gff for
BS17531.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8123737..8124459 | 17..739 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:36:35 Download gff for
BS17531.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8116837..8117559 | 17..739 | 100 | | Plus |
BS17531.5prime Sequence
753 bp (753 high quality bases) assembled on 2007-05-15
> BS17531.5prime
GAAGTTATCAGTCGACATGACGACGCACTTCAGCAATGTACTGCGGCAGG
CATTCAAAACGTTCGACCGGGCAAATCACGCCAGCTTCAATGCGAATTTG
CAGCATCTGCGTCAATTGACGGATGAGCTGACCTACCGGGATCTGCACCT
CCGCGAGGAGCTCTTTCGCAACGTGGGAAGCCATCGGGCACCCTGCAGCT
ACATGCATATATTCGAGGATGATCGCTTCTCCATGAGCCTGTTTATAGTG
CGCGGAGCGAGCACTATTCCCTTGCACGATCACCCCATGATGTTCGGTCT
GCTGCGCTGCATCTGGGGTCAGCTAATGGTGGACAGCTTTTCGCACCAGT
TAGGCCCGGATGAGCCGCTCACCTATGACCCCCATCAAACAGTGGTGAAG
GTGAATGTCGAGGAACCCAAATTGGTCACGCCGGCTAGTCCGTGTGCCAC
ATTGACTCCTAGAAAGAGAAATTACCACCAGATTGCCCAAATTGGTAGCG
GCGTAGCCGCTTTCTTCGACATTCTTAGTCCGCCATACGATGCGGATATG
CCAACATATGGACCGCGACAGTGTCGCTTCTATCGCGCCACGGCAGAGGG
CAGCCAGGTGCAGCTGCACTGCATCCCATCACCGGATACATACTATTGCG
ATGTTGTGGACACGCCCGAATCGGTGATGCAGGCCGCTTTTCAGTGCGCC
GACGAGGTCTATGCCGATAATGCCAGCGGGACACAGTGAAAGCTTTCTAG
ACC
BS17531.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:42:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7550-PA | 723 | CG7550-RA | 1..723 | 17..739 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:34:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7550-RA | 920 | CG7550-RA | 73..795 | 17..739 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:34:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8123737..8124459 | 739..17 | 3615 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:34:29 has no hits.
BS17531.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:42:17 Download gff for
BS17531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-PA | 1..723 | 17..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:50:04 Download gff for
BS17531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 73..795 | 17..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:05:48 Download gff for
BS17531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7550-RA | 73..795 | 17..739 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:05:48 Download gff for
BS17531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8123737..8124459 | 17..739 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:50:04 Download gff for
BS17531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8116837..8117559 | 17..739 | 100 | | Minus |
BS17531.pep Sequence
Translation from 16 to 738
> BS17531.pep
MTTHFSNVLRQAFKTFDRANHASFNANLQHLRQLTDELTYRDLHLREELF
RNVGSHRAPCSYMHIFEDDRFSMSLFIVRGASTIPLHDHPMMFGLLRCIW
GQLMVDSFSHQLGPDEPLTYDPHQTVVKVNVEEPKLVTPASPCATLTPRK
RNYHQIAQIGSGVAAFFDILSPPYDADMPTYGPRQCRFYRATAEGSQVQL
HCIPSPDTYYCDVVDTPESVMQAAFQCADEVYADNASGTQ*
BS17531.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:48:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7550-PA | 240 | CG7550-PA | 1..240 | 1..240 | 1296 | 100 | Plus |
