Clone Sequence Records
BS17565.complete Sequence
1451 bp assembled on 2009-12-07
GenBank Submission: KX803745
> BS17565.complete
GAAGTTATCAGTCGACATGTCGCGGAAGTGCGAGTTCCTGGTGGTCGGTG
GAGGTATTGCTGGCGTCAGCTGCGCCGAGTCCCTGGCCATCTACCGACCC
AATGCCTCCATTCTACTGCTCACGGAGTCCAGCATCGTGAAGAGTGTGAC
CAATTTGGTGCCGGTGGCTCGCTATCTGCATAAGTTCGACGTTCGGGAAC
AGGATGTCTCCGAAATGGGAGCTAGTTTTCAGACACTAGTGGATCGCCTG
GATCACATCAACAGCAGGGAGCATTGCATCCGCACTAAAGCGGGTCTGGA
GATCAAGTATCGCTATTTGTGCCTCTGCACCGGTGGAACACCCAAATTGT
TCTCCGGCAAAGTAGTAAATCCCCTTGTCATTGGCATTCGGGACACGGAC
TCTGTACAGCTGCTGCAGCGAAAGTTGGCGACAGCTAAGGATGTCCTGAT
TTTGGGCAATGGCGGCATTGCCAGTGAGTTGGCCTACGAGCTGAAGGATG
TAAATGTCCACTGGGTGGTTAAAGATTCTCACATCTCGGCCACATTTGTG
GATCCCGGAGCAGCCGAGTTCTTTCACATAGCCATGAATGAATGTAATGC
GAAGGATTCCTCTCCGGTTGTGGCTATTAAGCGAATGCGGTACAGTGAAG
TGCTGCCCAAGGAGCAGACTAACAACCATGGAGCTGCATTGGGTCCGGAC
TGGCATCGCAGCGTCGACTTGAGTGGAGCACGTGAAGGGGAAGAGAACCG
CCTACCAAAGATCTATTACAAATCTCGCATAAGCAGCGTTCAGGATCTCG
CCGACGACGCAGGTGCTATAGTCAAGTTGGAGCATGAGGATGGGAGCTTT
CAGCAGTTGACCTGTGACTTTATTGTTTCCGCAACGGGAGTTTGGCCGAA
TACCGACTACACGTGTGATTCGCCACTTCAATTTTCCGACGATGGTGGCA
TATCGGTGGATGAAATGATGCGTACGAATCTGGTGGATGTCTTTGCGGCC
GGTGATGTGTGCACGGCCAACTGGCCAGCCGCAATGCACTGGTTCCAGAT
GCGCCTGTGGACTCAGGCTCGCCAAATGGGCTCCATGGCGGGCAGGAGTA
TGGCGGCTGCCAGTGAAGGTGAAAGCGTGTACCAGGATTTCTGCTTCGAG
CTCTTTGGCCACGTAACCAAACTTTTCGGATATCCTGTTGTCCTGCTGGG
ACGCTTTAATGGTCAGGATTTGGGCAGGGACTACGAAATTCTGGTGCGCT
GCACGAGAAATAAGGAATACATCAAGTTTGTGCTTCAAAATGGCAGACTA
CGGGGAGCAATGCTAATCGGCAACACTGATCTCGCAGAGACCTGCGAGAA
CCTCATCCTGAACGGCATTGATTTGGAGCCCTATGGCGATGATATTCTTA
ATCCCGACATTGACATTGAAGACTATTTTGATTAGAAGCTTTCTAGACCA
T
BS17565.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:44:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10721-RB | 1419 | CG10721-PB | 1..1419 | 17..1435 | 7095 | 100 | Plus |
| CG10721-RA | 1419 | CG10721-PA | 1..1419 | 17..1435 | 7095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:44:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10721-RB | 1572 | CG10721-RB | 113..1531 | 17..1435 | 7095 | 100 | Plus |
| CG10721-RA | 1541 | CG10721-RA | 82..1500 | 17..1435 | 7095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:44:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20091693..20093111 | 17..1435 | 7095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:44:04 has no hits.
BS17565.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:27:49 Download gff for
BS17565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 1..1419 | 17..1435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:39:06 Download gff for
BS17565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 1..1419 | 17..1435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:56:15 Download gff for
BS17565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 82..1500 | 17..1435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:27:49 Download gff for
BS17565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 1..1419 | 17..1435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:37 Download gff for
BS17565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 82..1500 | 17..1435 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:37 Download gff for
BS17565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20091693..20093111 | 17..1435 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:56:15 Download gff for
BS17565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20091693..20093111 | 17..1435 | 100 | | Plus |
BS17565.3prime Sequence
877 bp (790 high quality bases) assembled on 2007-05-15
> BS17565.3prime
ATGGTCTAGAAAGCTTCTAATCAAAATAGTCTTCAATGTCAATGTCGGGA
TTAAGAATATCATCGCCATAGGGCTCCAAATCAATGCCGTTCAGGATGAG
GTTCTCGCAGGTCTCTGCGAGATCAGTGTTGCCGATTAGCATTGCTCCCC
GTAGTCTGCCATTTTGAAGCACAAACTTGATGTATTCCTTATTTCTCGTG
CAGCGCACCAGAATTTCGTAGTCCCTGCCCAAATCCTGACCATTAAAGCG
TCCCAGCAGGACAACAGGATATCCGAAAAGTTTGGTTACGTGGCCAAAGA
GCTCGAAGCAGAAATCCTGGTACACGCTTTCACCTTCACTGGCAGCCGCC
ATACTCCTGCCCGCCATGGAGCCCATTTGGCGAGCCTGAGTCCACAGGCG
CATCTGGAACCAGTGCATTGCGGCTGGCCAGTTGGCCGTGCACACATCAC
CGGCCGCAAAGACATCCACCAGATTCGTACGCATCATTTCATCCACCGAT
ATGCCACCATCGTCGGAAAATTGAAGTGGCGAATCACACGTGTAGTCGGT
ATTCGGCCAAACTCCCGTTGCGGAAACAATAAAGTCACAGGTCAACTGCT
GAAAGCTCCCATCCTCATGCTCCAACTTGACTATAGCACCTGCGTCGTCG
GCGAGATCCTGAACGCTGCTTATGCGAGATTTGTAATAGATCTTTGGTAG
GCGGTTCTCTTCCCCTTCACGTGCTCCACTCAAGTCGACGCTGCGATGCC
AGTCCGGACCCAATGCAGCTCCATGGTTGTTAGTCTGCTCCTTGGGCAGC
ACTTCACTGTACCGCATTCGCTTAATAGCCACAACCGGAGAAGAATCCTT
CGCATTACATTCATTCATGGCTATGTG
BS17565.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:52:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10721-PA | 1419 | CG10721-RA | 559..1419 | 877..17 | 4280 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:07:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10721-RB | 1572 | CG10721-RB | 671..1531 | 877..17 | 4290 | 99.9 | Minus |
| CG10721-RA | 1541 | CG10721-RA | 640..1500 | 877..17 | 4290 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20092251..20093111 | 877..17 | 4290 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:07:32 has no hits.
BS17565.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:52:59 Download gff for
BS17565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-PA | 559..1419 | 17..877 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:49:47 Download gff for
BS17565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 640..1503 | 10..877 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:06:29 Download gff for
BS17565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 640..1503 | 10..877 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:06:29 Download gff for
BS17565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20092251..20093114 | 10..877 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:49:47 Download gff for
BS17565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20092251..20093114 | 10..877 | 99 | | Minus |
BS17565.5prime Sequence
870 bp (789 high quality bases) assembled on 2007-05-15
> BS17565.5prime
GAAGTTATCAGTCGACATGTCGCGGAAGTGCGAGTTCCTGGTGGTCGGTG
GAGGTATTGCTGGCGTCAGCTGCGCCGAGTCCCTGGCCATCTACCGACCC
AATGCCTCCATTCTACTGCTCACGGAGTCCAGCATCGTGAAGAGTGTGAC
CAATTTGGTGCCGGTGGCTCGCTATCTGCATAAGTTCGACGTTCGGGAAC
AGGATGTCTCCGAAATGGGAGCTAGTTTTCAGACACTAGTGGATCGCCTG
GATCACATCAACAGCAGGGAGCATTGCATCCGCACTAAAGCGGGTCTGGA
GATCAAGTATCGCTATTTGTGCCTCTGCACCGGTGGAACACCCAAATTGT
TCTCCGGCAAAGTAGTAAATCCCCTTGTCATTGGCATTCGGGACACGGAC
TCTGTACAGCTGCTGCAGCGAAAGTTGGCGACAGCTAAGGATGTCCTGAT
TTTGGGCAATGGCGGCATTGCCAGTGAGTTGGCCTACGAGCTGAAGGATG
TAAATGTCCACTGGGTGGTTAAAGATTCTCACATCTCGGCCACATTTGTG
GATCCCGGAGCAGCCGAGTTCTTTCACATAGCCATGAATGAATGTAATGC
GAAGGATTCCTCTCCGGTTGTGGCTATTAAGCGAATGCGGTACAGTGAAG
TGCTGCCCAAGGAGCAGACTAACAACCATGGAGCTGCATTGGGTCCGGAC
TGGCATCGCAGCGTCGACTTGAGTGGAGCACGTGAAGGGGAAGAGAACCG
CCTACCAAAGATCTATTACAAATCTCGCATAAGCAGCGTTCAGGATCTCG
CCGACGACGCAGGTGCTATAGTCAAGTTGGAGCATGANGATGGGAGCTTT
CAGCAGTTGACCTGTGACTT
BS17565.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:46:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10721-PA | 1419 | CG10721-RA | 1..854 | 17..870 | 4251 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:54:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10721-RB | 1572 | CG10721-RB | 113..966 | 17..870 | 4259 | 99.9 | Plus |
| CG10721-RA | 1541 | CG10721-RA | 82..935 | 17..870 | 4259 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:54:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20091693..20092546 | 17..870 | 4259 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:54:49 has no hits.
BS17565.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:46:43 Download gff for
BS17565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-PA | 1..854 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:34:40 Download gff for
BS17565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 82..935 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:59 Download gff for
BS17565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 82..935 | 17..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:59 Download gff for
BS17565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20091693..20092546 | 17..870 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:34:40 Download gff for
BS17565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20091693..20092546 | 17..870 | 99 | | Plus |
BS17565.pep Sequence
Translation from 16 to 1434
> BS17565.pep
MSRKCEFLVVGGGIAGVSCAESLAIYRPNASILLLTESSIVKSVTNLVPV
ARYLHKFDVREQDVSEMGASFQTLVDRLDHINSREHCIRTKAGLEIKYRY
LCLCTGGTPKLFSGKVVNPLVIGIRDTDSVQLLQRKLATAKDVLILGNGG
IASELAYELKDVNVHWVVKDSHISATFVDPGAAEFFHIAMNECNAKDSSP
VVAIKRMRYSEVLPKEQTNNHGAALGPDWHRSVDLSGAREGEENRLPKIY
YKSRISSVQDLADDAGAIVKLEHEDGSFQQLTCDFIVSATGVWPNTDYTC
DSPLQFSDDGGISVDEMMRTNLVDVFAAGDVCTANWPAAMHWFQMRLWTQ
ARQMGSMAGRSMAAASEGESVYQDFCFELFGHVTKLFGYPVVLLGRFNGQ
DLGRDYEILVRCTRNKEYIKFVLQNGRLRGAMLIGNTDLAETCENLILNG
IDLEPYGDDILNPDIDIEDYFD*
BS17565.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:59:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10721-PB | 472 | CG10721-PB | 1..472 | 1..472 | 2472 | 100 | Plus |
| CG10721-PA | 472 | CG10721-PA | 1..472 | 1..472 | 2472 | 100 | Plus |
