Clone BS17567 Report

Search the DGRC for BS17567

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:175
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG14694-RA
Protein status:BS17567.pep: full length peptide match
Sequenced Size:1373

Clone Sequence Records

BS17567.complete Sequence

1373 bp assembled on 2009-12-08

GenBank Submission: KX802617

> BS17567.complete
GAAGTTATCAGTCGACATGGAGTCGTGGCTGAAGATATCGTGCCTGCTAT
GCATATTCGGGTTTCTCCGGGAACTTCGACCCTCGGAGCCATACCACGCG
GAAATCCTGATGGGCGAGTGGTATCACGTCACCCAGGACGAGGTCAACCG
ATCCGTTTACCCGGTGGGCACATACTCCTACCTGGCGCTCCTAATCTTCG
TCTTCCTCATTACGGACCTGCTCAGATACAAGCCCGTGATCATCGCCAAT
GCCACTACAGGCATCTGCATCTGGGGCACACTGATTTGGACGACCACTTT
GAGCGGCCTGCAGGCGGTGGAGGTTTTCTATGGCTTCTACCAGGCGGGCG
AGGTGGCCTACTACTCGTACATCTACGCCAAGGTGGACAAACAGTACTAT
CCCAGGGTGACCTCGCACACCAGGGCAGCCATGTTCGTGGGCAAGCTAGT
TGCGGGAATCCTGGCTCAGATGGTCATTGGAATGAGGTGGATGAACTACA
AGCAACTGTTTTACATCACCGTCACCTCTCAAGTTGCTGCGCTGCTCTGG
GCATTCTTTTTGCCAAAGGTGGAGAAGAGTTTGTACTTTCACAATCGAAG
CGAGGCCATAGAAGGTGGAACCAAATCGGATGGTGGTAACCTGGAGAAGG
GTTCAGAGCAACCCAGTAACGAGGAAGCGAGCCAAGAAAAGAAGATACCA
GCGTTGCAGCTCCTTTGGTCCCACTTCCGTAGTGCCTACACTAATCCCTT
GGTGATACAATGGAGCTTGTGGTATGCCATCAGTTTGGCTGGATTTCTGC
AAATCACCACCTATATGCAGGTGGTATGGAAGTCCTTCGAGAACGAACCA
ACAATAGCCTGGAATGGAGCTGTGGACGTGGCCCTGACGCTTCTAAGCGC
TGTGTTCGCCCTTCTCGCCGGTTATTTCCATGCTGGACGTCTGAACACCA
GGAGCAGCCTGCTCTCGATGGCTCTGCTGTCGGTCCTGGAAGGAGGTTGT
GTTTTGCTTTCCTGCTGGACCGATGATATATATCTGTCCTATCTTGGCTA
TGTGCTGTATGGAGGCCTGTTTGCCTTCACCATAACAGTGGCCAGCTCGG
AGTTGGCCAGCAGCTTGGAGGAGGATAGCTTCGCTCTGGTGTTTGGTTTC
AACACGTTCGTGGGACTCCTCCTGCAGTGCATCCTCACATTTGTCGTCGT
CTCGGAAAAGGCCAATCTGAATTTGAATGTTTTTCAACAGTTTTCCGTCT
ACGCATTCTATTTTATAGTTATTGGAATAGTCTATTCTATTGCTGTTATA
TTGCAATATATATGGTCAATTTCGAAGAAACCAAAAGCAATTCAGGAGGC
GAATTAAAAGCTTTCTAGACCAT

BS17567.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:54:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1341 CG14694-PA 1..1341 17..1357 6705 100 Plus
CG6574-RA 1335 CG6574-PA 334..435 350..451 255 83.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1369 CG14694-RA 11..1351 17..1357 6705 100 Plus
CG6574-RA 1962 CG6574-RA 709..810 350..451 255 83.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10858840..10859165 853..528 1630 100 Minus
3R 32079331 3R 10859229..10859533 527..223 1525 100 Minus
3R 32079331 3R 10858220..10858483 1357..1094 1320 100 Minus
3R 32079331 3R 10858544..10858785 1095..854 1210 100 Minus
3R 32079331 3R 10859595..10859803 225..17 1045 100 Minus
3R 32079331 3R 10861801..10861902 451..350 255 83.3 Minus
Blast to na_te.dros performed on 2014-11-28 01:54:15 has no hits.

BS17567.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:58 Download gff for BS17567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 11..1349 17..1355 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:01:01 Download gff for BS17567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 11..1349 17..1355 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:30 Download gff for BS17567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 11..1349 17..1355 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:35 Download gff for BS17567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 11..1349 17..1355 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:35 Download gff for BS17567.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10858222..10858481 1096..1355 100 <- Minus
3R 10858544..10858785 854..1095 100 <- Minus
3R 10858840..10859165 528..853 100 <- Minus
3R 10859229..10859530 226..527 100 <- Minus
3R 10859595..10859803 17..225 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:01:01 Download gff for BS17567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6683944..6684203 1096..1355 100 <- Minus
arm_3R 6684266..6684507 854..1095 100 <- Minus
arm_3R 6684562..6684887 528..853 100 <- Minus
arm_3R 6684951..6685252 226..527 100 <- Minus
arm_3R 6685317..6685525 17..225 100   Minus

BS17567.3prime Sequence

809 bp (808 high quality bases) assembled on 2007-05-15

> BS17567.3prime
ATGGTCTAGAAAGCTTTTAATTCTCCTCCTGAATTGCTTTTGGTTTCTTC
GAAATTGACCATATATATTGCAATATAACAGCAATAGAATAGACTATTCC
AATAACTATAAAATAGAATGCGTAGACGGAAAACTGTTGAAAAACATTCA
AATTCAGATTGGCCTTTTCCGAGACGACGACAAATGTGAGGATGCACTGC
AGGAGGAGTCCCACGAACGTGTTGAAACCAAACACCAGAGCGAAGCTATC
CTCCTCCAAGCTGCTGGCCAACTCCGAGCTGGCCACTGTTATGGTGAAGG
CAAACAGGCCTCCATACAGCACATAGCCAAGATAGGACAGATATATATCA
TCGGTCCAGCAGGAAAGCAAAACACAACCTCCTTCCAGGACCGACAGCAG
AGCCATCGAGAGCAGGCTGCTCCTGGTGTTCAGACGTCCAGCATGGAAAT
AACCGGCGAGAAGGGCGAACACAGCGCTTAGAAGCGTCAGGGCCACGTCC
ACAGCTCCATTCCAGGCTATTGTTGGTTCGTTCTCGAAGGACTTCCATAC
CACCTGCATATAGGTGGTGATTTGCAGAAATCCAGCCAAACTGATGGCAT
ACCACAAGCTCCATTGTATCACCAAGGGATTAGTGTAGGCACTACGGAAG
TGGGACCAAAGGAGCTGCAACGCTGGTATCTTCTTTTCTTGGCTCGCTTC
CTCGTTACTGGGTTGCTCTGAACCCTTCTCCAGGTTACCACCATCCGATT
TGGTTCCACCTTCTATGGCCTCGCTTCGATTGTGAAAGTACAAACTCTTC
TCCACCTTT

BS17567.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-PA 1341 CG14694-RA 549..1341 809..17 3940 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1369 CG14694-RA 559..1351 809..17 3950 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:27:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10858840..10859128 521..809 1445 100 Plus
3R 32079331 3R 10858220..10858483 17..280 1305 99.6 Plus
3R 32079331 3R 10858544..10858785 279..520 1210 100 Plus
Blast to na_te.dros performed on 2015-02-11 16:27:52 has no hits.

BS17567.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:49:29 Download gff for BS17567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-PA 549..1341 17..809 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:50:10 Download gff for BS17567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 559..1360 8..809 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:51:04 Download gff for BS17567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 559..1360 8..809 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:51:04 Download gff for BS17567.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10858211..10858481 8..278 98 <- Plus
3R 10858544..10858785 279..520 100 <- Plus
3R 10858840..10859128 521..809 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:50:10 Download gff for BS17567.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6683933..6684203 8..278 98 <- Plus
arm_3R 6684266..6684507 279..520 100 <- Plus
arm_3R 6684562..6684850 521..809 100   Plus

BS17567.5prime Sequence

840 bp (798 high quality bases) assembled on 2007-05-15

> BS17567.5prime
GAAGTTATCAGTCGACATGGAGTCGTGGCTGAAGATATCGTGCCTGCTAT
GCATATTCGGGTTTCTCCGGGAACTTCGACCCTCGGAGCCATACCACGCG
GAAATCCTGATGGGCGAGTGGTATCACGTCACCCAGGACGAGGTCAACCG
ATCCGTTTACCCGGTGGGCACATACTCCTACCTGGCGCTCCTAATCTTCG
TCTTCCTCATTACGGACCTGCTCAGATACAAGCCCGTGATCATCGCCAAT
GCCACTACAGGCATCTGCATCTGGGGCACACTGATTTGGACGACCACTTT
GAGCGGCCTGCAGGCGGTGGAGGTTTTCTATGGCTTCTACCAGGCGGGCG
AGGTGGCCTACTACTCGTACATCTACGCCAAGGTGGACAAACAGTACTAT
CCCAGGGTGACCTCGCACACCAGGGCAGCCATGTTCGTGGGCAAGCTAGT
TGCGGGAATCCTGGCTCAGATGGTCATTGGAATGAGGTGGATGAACTACA
AGCAACTGTTTTACATCACCGTCACCTCTCAAGTTGCTGCGCTGCTCTGG
GCATTCTTTTTGCCAAAGGTGGAGAAGAGTTTGTACTTTCACAATCGAAG
CGAGGCCATAGAAGGTGGAACCAAATCGGATGGTGGTAACCTGGAGAAGG
GTTCAGAGCAACCCAGTAACGAGGAAGCGAGCCAAGAAAAGAAGATACCA
GCGTTGCAGCTCCTTTGGTCCCACTTCCGTAGTGCCTACACTAATCCCTT
GGTGATACAATGGAGCTTGTGGTATGCCATCAGTTTGGCTGGATTTCTGC
AAATCACCACCTATATGCANGTGGTATGGAAGTCCTTCGA

BS17567.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-PA 1341 CG14694-RA 1..824 17..840 4101 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:14:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1369 CG14694-RA 11..834 17..840 4109 99.9 Plus
CG6574-RA 1962 CG6574-RA 709..810 350..451 255 83.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10858853..10859165 840..528 1554 99.7 Minus
3R 32079331 3R 10859229..10859533 527..223 1525 100 Minus
3R 32079331 3R 10859595..10859803 225..17 1045 100 Minus
3R 32079331 3R 10861801..10861902 451..350 255 83.3 Minus
Blast to na_te.dros performed on 2015-02-12 16:14:46 has no hits.

BS17567.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:43:32 Download gff for BS17567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-PA 1..823 17..839 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:17:42 Download gff for BS17567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..833 13..839 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:28:04 Download gff for BS17567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..833 13..839 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:28:04 Download gff for BS17567.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10858854..10859165 528..839 99 <- Minus
3R 10859229..10859530 226..527 100 <- Minus
3R 10859595..10859807 13..225 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:17:42 Download gff for BS17567.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6684576..6684887 528..839 99 <- Minus
arm_3R 6684951..6685252 226..527 100 <- Minus
arm_3R 6685317..6685529 13..225 99   Minus

BS17567.pep Sequence

Translation from 16 to 1356

> BS17567.pep
MESWLKISCLLCIFGFLRELRPSEPYHAEILMGEWYHVTQDEVNRSVYPV
GTYSYLALLIFVFLITDLLRYKPVIIANATTGICIWGTLIWTTTLSGLQA
VEVFYGFYQAGEVAYYSYIYAKVDKQYYPRVTSHTRAAMFVGKLVAGILA
QMVIGMRWMNYKQLFYITVTSQVAALLWAFFLPKVEKSLYFHNRSEAIEG
GTKSDGGNLEKGSEQPSNEEASQEKKIPALQLLWSHFRSAYTNPLVIQWS
LWYAISLAGFLQITTYMQVVWKSFENEPTIAWNGAVDVALTLLSAVFALL
AGYFHAGRLNTRSSLLSMALLSVLEGGCVLLSCWTDDIYLSYLGYVLYGG
LFAFTITVASSELASSLEEDSFALVFGFNTFVGLLLQCILTFVVVSEKAN
LNLNVFQQFSVYAFYFIVIGIVYSIAVILQYIWSISKKPKAIQEAN*

BS17567.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-PA 446 CG14694-PA 1..446 1..446 2308 100 Plus
CG6574-PA 444 CG6574-PA 1..429 1..432 1354 58.3 Plus
CG17036-PB 432 CG17036-PB 1..416 1..429 915 44.1 Plus
CG17036-PA 432 CG17036-PA 1..416 1..429 915 44.1 Plus