Clone Sequence Records
BS17567.complete Sequence
1373 bp assembled on 2009-12-08
GenBank Submission: KX802617
> BS17567.complete
GAAGTTATCAGTCGACATGGAGTCGTGGCTGAAGATATCGTGCCTGCTAT
GCATATTCGGGTTTCTCCGGGAACTTCGACCCTCGGAGCCATACCACGCG
GAAATCCTGATGGGCGAGTGGTATCACGTCACCCAGGACGAGGTCAACCG
ATCCGTTTACCCGGTGGGCACATACTCCTACCTGGCGCTCCTAATCTTCG
TCTTCCTCATTACGGACCTGCTCAGATACAAGCCCGTGATCATCGCCAAT
GCCACTACAGGCATCTGCATCTGGGGCACACTGATTTGGACGACCACTTT
GAGCGGCCTGCAGGCGGTGGAGGTTTTCTATGGCTTCTACCAGGCGGGCG
AGGTGGCCTACTACTCGTACATCTACGCCAAGGTGGACAAACAGTACTAT
CCCAGGGTGACCTCGCACACCAGGGCAGCCATGTTCGTGGGCAAGCTAGT
TGCGGGAATCCTGGCTCAGATGGTCATTGGAATGAGGTGGATGAACTACA
AGCAACTGTTTTACATCACCGTCACCTCTCAAGTTGCTGCGCTGCTCTGG
GCATTCTTTTTGCCAAAGGTGGAGAAGAGTTTGTACTTTCACAATCGAAG
CGAGGCCATAGAAGGTGGAACCAAATCGGATGGTGGTAACCTGGAGAAGG
GTTCAGAGCAACCCAGTAACGAGGAAGCGAGCCAAGAAAAGAAGATACCA
GCGTTGCAGCTCCTTTGGTCCCACTTCCGTAGTGCCTACACTAATCCCTT
GGTGATACAATGGAGCTTGTGGTATGCCATCAGTTTGGCTGGATTTCTGC
AAATCACCACCTATATGCAGGTGGTATGGAAGTCCTTCGAGAACGAACCA
ACAATAGCCTGGAATGGAGCTGTGGACGTGGCCCTGACGCTTCTAAGCGC
TGTGTTCGCCCTTCTCGCCGGTTATTTCCATGCTGGACGTCTGAACACCA
GGAGCAGCCTGCTCTCGATGGCTCTGCTGTCGGTCCTGGAAGGAGGTTGT
GTTTTGCTTTCCTGCTGGACCGATGATATATATCTGTCCTATCTTGGCTA
TGTGCTGTATGGAGGCCTGTTTGCCTTCACCATAACAGTGGCCAGCTCGG
AGTTGGCCAGCAGCTTGGAGGAGGATAGCTTCGCTCTGGTGTTTGGTTTC
AACACGTTCGTGGGACTCCTCCTGCAGTGCATCCTCACATTTGTCGTCGT
CTCGGAAAAGGCCAATCTGAATTTGAATGTTTTTCAACAGTTTTCCGTCT
ACGCATTCTATTTTATAGTTATTGGAATAGTCTATTCTATTGCTGTTATA
TTGCAATATATATGGTCAATTTCGAAGAAACCAAAAGCAATTCAGGAGGC
GAATTAAAAGCTTTCTAGACCAT
BS17567.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:54:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14694-RA | 1341 | CG14694-PA | 1..1341 | 17..1357 | 6705 | 100 | Plus |
CG6574-RA | 1335 | CG6574-PA | 334..435 | 350..451 | 255 | 83.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:54:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14694-RA | 1369 | CG14694-RA | 11..1351 | 17..1357 | 6705 | 100 | Plus |
CG6574-RA | 1962 | CG6574-RA | 709..810 | 350..451 | 255 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:54:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10858840..10859165 | 853..528 | 1630 | 100 | Minus |
3R | 32079331 | 3R | 10859229..10859533 | 527..223 | 1525 | 100 | Minus |
3R | 32079331 | 3R | 10858220..10858483 | 1357..1094 | 1320 | 100 | Minus |
3R | 32079331 | 3R | 10858544..10858785 | 1095..854 | 1210 | 100 | Minus |
3R | 32079331 | 3R | 10859595..10859803 | 225..17 | 1045 | 100 | Minus |
3R | 32079331 | 3R | 10861801..10861902 | 451..350 | 255 | 83.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:54:15 has no hits.
BS17567.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:58 Download gff for
BS17567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 11..1349 | 17..1355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:01:01 Download gff for
BS17567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 11..1349 | 17..1355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:30 Download gff for
BS17567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 11..1349 | 17..1355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:35 Download gff for
BS17567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 11..1349 | 17..1355 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:35 Download gff for
BS17567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10858222..10858481 | 1096..1355 | 100 | <- | Minus |
3R | 10858544..10858785 | 854..1095 | 100 | <- | Minus |
3R | 10858840..10859165 | 528..853 | 100 | <- | Minus |
3R | 10859229..10859530 | 226..527 | 100 | <- | Minus |
3R | 10859595..10859803 | 17..225 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:01:01 Download gff for
BS17567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6683944..6684203 | 1096..1355 | 100 | <- | Minus |
arm_3R | 6684266..6684507 | 854..1095 | 100 | <- | Minus |
arm_3R | 6684562..6684887 | 528..853 | 100 | <- | Minus |
arm_3R | 6684951..6685252 | 226..527 | 100 | <- | Minus |
arm_3R | 6685317..6685525 | 17..225 | 100 | | Minus |
BS17567.3prime Sequence
809 bp (808 high quality bases) assembled on 2007-05-15
> BS17567.3prime
ATGGTCTAGAAAGCTTTTAATTCTCCTCCTGAATTGCTTTTGGTTTCTTC
GAAATTGACCATATATATTGCAATATAACAGCAATAGAATAGACTATTCC
AATAACTATAAAATAGAATGCGTAGACGGAAAACTGTTGAAAAACATTCA
AATTCAGATTGGCCTTTTCCGAGACGACGACAAATGTGAGGATGCACTGC
AGGAGGAGTCCCACGAACGTGTTGAAACCAAACACCAGAGCGAAGCTATC
CTCCTCCAAGCTGCTGGCCAACTCCGAGCTGGCCACTGTTATGGTGAAGG
CAAACAGGCCTCCATACAGCACATAGCCAAGATAGGACAGATATATATCA
TCGGTCCAGCAGGAAAGCAAAACACAACCTCCTTCCAGGACCGACAGCAG
AGCCATCGAGAGCAGGCTGCTCCTGGTGTTCAGACGTCCAGCATGGAAAT
AACCGGCGAGAAGGGCGAACACAGCGCTTAGAAGCGTCAGGGCCACGTCC
ACAGCTCCATTCCAGGCTATTGTTGGTTCGTTCTCGAAGGACTTCCATAC
CACCTGCATATAGGTGGTGATTTGCAGAAATCCAGCCAAACTGATGGCAT
ACCACAAGCTCCATTGTATCACCAAGGGATTAGTGTAGGCACTACGGAAG
TGGGACCAAAGGAGCTGCAACGCTGGTATCTTCTTTTCTTGGCTCGCTTC
CTCGTTACTGGGTTGCTCTGAACCCTTCTCCAGGTTACCACCATCCGATT
TGGTTCCACCTTCTATGGCCTCGCTTCGATTGTGAAAGTACAAACTCTTC
TCCACCTTT
BS17567.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:49:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14694-PA | 1341 | CG14694-RA | 549..1341 | 809..17 | 3940 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:27:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14694-RA | 1369 | CG14694-RA | 559..1351 | 809..17 | 3950 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10858840..10859128 | 521..809 | 1445 | 100 | Plus |
3R | 32079331 | 3R | 10858220..10858483 | 17..280 | 1305 | 99.6 | Plus |
3R | 32079331 | 3R | 10858544..10858785 | 279..520 | 1210 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:27:52 has no hits.
BS17567.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:49:29 Download gff for
BS17567.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-PA | 549..1341 | 17..809 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:50:10 Download gff for
BS17567.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 559..1360 | 8..809 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:51:04 Download gff for
BS17567.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 559..1360 | 8..809 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:51:04 Download gff for
BS17567.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10858211..10858481 | 8..278 | 98 | <- | Plus |
3R | 10858544..10858785 | 279..520 | 100 | <- | Plus |
3R | 10858840..10859128 | 521..809 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:50:10 Download gff for
BS17567.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6683933..6684203 | 8..278 | 98 | <- | Plus |
arm_3R | 6684266..6684507 | 279..520 | 100 | <- | Plus |
arm_3R | 6684562..6684850 | 521..809 | 100 | | Plus |
BS17567.5prime Sequence
840 bp (798 high quality bases) assembled on 2007-05-15
> BS17567.5prime
GAAGTTATCAGTCGACATGGAGTCGTGGCTGAAGATATCGTGCCTGCTAT
GCATATTCGGGTTTCTCCGGGAACTTCGACCCTCGGAGCCATACCACGCG
GAAATCCTGATGGGCGAGTGGTATCACGTCACCCAGGACGAGGTCAACCG
ATCCGTTTACCCGGTGGGCACATACTCCTACCTGGCGCTCCTAATCTTCG
TCTTCCTCATTACGGACCTGCTCAGATACAAGCCCGTGATCATCGCCAAT
GCCACTACAGGCATCTGCATCTGGGGCACACTGATTTGGACGACCACTTT
GAGCGGCCTGCAGGCGGTGGAGGTTTTCTATGGCTTCTACCAGGCGGGCG
AGGTGGCCTACTACTCGTACATCTACGCCAAGGTGGACAAACAGTACTAT
CCCAGGGTGACCTCGCACACCAGGGCAGCCATGTTCGTGGGCAAGCTAGT
TGCGGGAATCCTGGCTCAGATGGTCATTGGAATGAGGTGGATGAACTACA
AGCAACTGTTTTACATCACCGTCACCTCTCAAGTTGCTGCGCTGCTCTGG
GCATTCTTTTTGCCAAAGGTGGAGAAGAGTTTGTACTTTCACAATCGAAG
CGAGGCCATAGAAGGTGGAACCAAATCGGATGGTGGTAACCTGGAGAAGG
GTTCAGAGCAACCCAGTAACGAGGAAGCGAGCCAAGAAAAGAAGATACCA
GCGTTGCAGCTCCTTTGGTCCCACTTCCGTAGTGCCTACACTAATCCCTT
GGTGATACAATGGAGCTTGTGGTATGCCATCAGTTTGGCTGGATTTCTGC
AAATCACCACCTATATGCANGTGGTATGGAAGTCCTTCGA
BS17567.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:43:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14694-PA | 1341 | CG14694-RA | 1..824 | 17..840 | 4101 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:14:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14694-RA | 1369 | CG14694-RA | 11..834 | 17..840 | 4109 | 99.9 | Plus |
CG6574-RA | 1962 | CG6574-RA | 709..810 | 350..451 | 255 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:14:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10858853..10859165 | 840..528 | 1554 | 99.7 | Minus |
3R | 32079331 | 3R | 10859229..10859533 | 527..223 | 1525 | 100 | Minus |
3R | 32079331 | 3R | 10859595..10859803 | 225..17 | 1045 | 100 | Minus |
3R | 32079331 | 3R | 10861801..10861902 | 451..350 | 255 | 83.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:14:46 has no hits.
BS17567.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:43:32 Download gff for
BS17567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-PA | 1..823 | 17..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:17:42 Download gff for
BS17567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 7..833 | 13..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:28:04 Download gff for
BS17567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14694-RA | 7..833 | 13..839 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:28:04 Download gff for
BS17567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10858854..10859165 | 528..839 | 99 | <- | Minus |
3R | 10859229..10859530 | 226..527 | 100 | <- | Minus |
3R | 10859595..10859807 | 13..225 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:17:42 Download gff for
BS17567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6684576..6684887 | 528..839 | 99 | <- | Minus |
arm_3R | 6684951..6685252 | 226..527 | 100 | <- | Minus |
arm_3R | 6685317..6685529 | 13..225 | 99 | | Minus |
BS17567.pep Sequence
Translation from 16 to 1356
> BS17567.pep
MESWLKISCLLCIFGFLRELRPSEPYHAEILMGEWYHVTQDEVNRSVYPV
GTYSYLALLIFVFLITDLLRYKPVIIANATTGICIWGTLIWTTTLSGLQA
VEVFYGFYQAGEVAYYSYIYAKVDKQYYPRVTSHTRAAMFVGKLVAGILA
QMVIGMRWMNYKQLFYITVTSQVAALLWAFFLPKVEKSLYFHNRSEAIEG
GTKSDGGNLEKGSEQPSNEEASQEKKIPALQLLWSHFRSAYTNPLVIQWS
LWYAISLAGFLQITTYMQVVWKSFENEPTIAWNGAVDVALTLLSAVFALL
AGYFHAGRLNTRSSLLSMALLSVLEGGCVLLSCWTDDIYLSYLGYVLYGG
LFAFTITVASSELASSLEEDSFALVFGFNTFVGLLLQCILTFVVVSEKAN
LNLNVFQQFSVYAFYFIVIGIVYSIAVILQYIWSISKKPKAIQEAN*
BS17567.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:54:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14694-PA | 446 | CG14694-PA | 1..446 | 1..446 | 2308 | 100 | Plus |
CG6574-PA | 444 | CG6574-PA | 1..429 | 1..432 | 1354 | 58.3 | Plus |
CG17036-PB | 432 | CG17036-PB | 1..416 | 1..429 | 915 | 44.1 | Plus |
CG17036-PA | 432 | CG17036-PA | 1..416 | 1..429 | 915 | 44.1 | Plus |