Clone BS17569 Report

Search the DGRC for BS17569

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:175
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG14606-RA
Protein status:BS17569.pep: full length peptide match
Sequenced Size:1349

Clone Sequence Records

BS17569.complete Sequence

1349 bp assembled on 2009-12-07

GenBank Submission: KX803981

> BS17569.complete
GAAGTTATCAGTCGACATGACACTGACCCATGGAATTGCCGTGGGATGGC
TGTCTCCCTCTCTTCGACTGCTCGCATCCGACGAAAGCCCTTTGGGGGAT
CCCCTGACCATTACCCAGGCATCCTGGGTTGGATCACTTATCGGCCTAGG
CTCGCTGACCGGCAATATAATCTTTGGACTGCTACTCGATCGATTGGGCC
GTAAAGTGTGCATGTATTTCCTGGCCATACCCAATATGATCTACTGGATC
CTTATCTACTCCGCCCAAGACGTTACGTATCTGTATGCTGGTCGATTCCT
GGCGGGAATGTCCGGAGGTGGCTGTTACGTCGTCTTGCCCATATTCATAG
CTGAAATAGCCGACAATAGCGTTCGGGGAGCGTTATCGTCCATGGCCATG
ATGTACGTTAGCATCGGCATGATGGTTGGCTTTACATTAGCCTCGTATCT
CCCGTACTATCTGATGCCGTGCATTATCGTTGCTCTGCCGGTGGTGTTTA
TGTTGTCAGTTATTGGCTTATCGGAGACACCGCAATATTTGTTGAGACGA
GGGCGCGATGACCAGGCCGAGAAGTCTTTCTACTTCTACAAGAACCTGAC
ACCACCCACTTCCTCCGACAAGGAAGCTTCTCAGCATGACGCAGCTAAAA
TTGAGTTTGACACATTTCGGCTTCAGGTGCTCAGTGGCGGCGTCACCGAG
AGCATTTCTTGGCGGGATTTCATTAACGTGCCTACACTAAAGATATTCGG
CCTCATCTTTGTACTGATCATCTGCAATCAGCTGTCAGGGAGCTTCGCCA
TCTTCAACTACACATCGCACATTTTTGCTGAGCTAGGCAACAATCTGGAT
CCAAACACCAGCACCATTGTGGTCGGAGCTGCACAGCTGGTGGGAATCTT
CAGTGCTGTCGTCCTAGTGGACAGACTGGGTCGTCGTGTTCTGCTCCTCA
CCTCAATGGGTGGAATGGGTTTGGGTGAGCTGGCAATTGCTCTGCTCAAG
TGCTTCGCATCGGATGAGTTTCTGAACCAGAATGGATGGCTTCCTTTGGT
GATCATGTGCCTTGTGGCCTGCATTGCTTCACTAGGAGTTATAGCCCTGA
TCTTCATCATCATTATTGAGCTGCTCCCAGCTAAGATCCGCTCCATTGGC
ACCTCCTTGAGCATGGCCACATTTAGCGGATTTATCTTCGTGGCTCTAAA
GATCTACCCCACAATGATCTACGATCAGGGCCTGGCTGCCACCATGTTCA
TGTCGGCGGGCATGTGCCTATTCGGATTCATTGTCTTGGGACTGTTTCTG
CCAGAGACCAAAGGAAAGCTGATGACGCACTGAAAGCTTTCTAGACCAT

BS17569.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:44:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14606-RB 1317 CG14606-PB 1..1317 17..1333 6585 100 Plus
CG14606-RA 1317 CG14606-PA 1..1317 17..1333 6585 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:44:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14606-RB 1863 CG14606-RB 150..1466 17..1333 6585 100 Plus
CG14606-RA 1925 CG14606-RA 212..1528 17..1333 6585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:44:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7215029..7215441 1135..723 2065 100 Minus
3R 32079331 3R 7215505..7215859 722..368 1775 100 Minus
3R 32079331 3R 7214736..7214935 1333..1134 1000 100 Minus
3R 32079331 3R 7216383..7216514 369..238 660 100 Minus
3R 32079331 3R 7216592..7216704 238..126 565 100 Minus
3R 32079331 3R 7216762..7216872 127..17 555 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:44:38 has no hits.

BS17569.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:27:38 Download gff for BS17569.complete
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 1..1317 17..1333 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:39:10 Download gff for BS17569.complete
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 1..1316 17..1332 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:56:29 Download gff for BS17569.complete
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 212..1527 17..1332 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:27:38 Download gff for BS17569.complete
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 1..1317 17..1333 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:47 Download gff for BS17569.complete
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 212..1527 17..1332 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:47 Download gff for BS17569.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7214737..7214933 1136..1332 100 <- Minus
3R 7215029..7215441 723..1135 100 <- Minus
3R 7215505..7215857 370..722 100 <- Minus
3R 7216383..7216513 239..369 100 <- Minus
3R 7216592..7216703 127..238 100 <- Minus
3R 7216763..7216872 17..126 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:56:29 Download gff for BS17569.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3040459..3040655 1136..1332 100 <- Minus
arm_3R 3040751..3041163 723..1135 100 <- Minus
arm_3R 3041227..3041579 370..722 100 <- Minus
arm_3R 3042105..3042235 239..369 100 <- Minus
arm_3R 3042314..3042425 127..238 100 <- Minus
arm_3R 3042485..3042594 17..126 100   Minus

BS17569.3prime Sequence

828 bp (761 high quality bases) assembled on 2007-05-15

> BS17569.3prime
ATGGTCTAGAAAGCTTTCAGTGCGTCATCAGCTTTCCTTTGGTCTCTGGC
AGAAACAGTCCCAAGACAATGAATCCGAATAGGCACATGCCCGCCGACAT
GAACATGGTGGCAGCCAGGCCCTGATCGTAGATCATTGTGGGGTAGATCT
TTAGAGCCACGAAGATAAATCCGCTAAATGTGGCCATGCTCAAGGAGGTG
CCAATGGAGCGGATCTTAGCTGGGAGCAGCTCAATAATGATGATGAAGAT
CAGGGCTATAACTCCTAGTGAAGCAATGCAGGCCACAAGGCACATGATCA
CCAAAGGAAGCCATCCATTCTGGTTCAGAAACTCATCCGATGCGAAGCAC
TTGAGCAGAGCAATTGCCAGCTCACCCAAACCCATTCCACCCATTGAGGT
GAGGAGCAGAACACGACGACCCAGTCTGTCCACTAGGACGACAGCACTGA
AGATTCCCACCAGCTGTGCAGCTCCGACCACAATGGTGCTGGTGTTTGGA
TCCAGATTGTTGCCTAGCTCAGCAAAAATGTGCGATGTGTAGTTGAAGAT
GGCGAAGCTCCCTGACAGCTGATTGCAGATGATCAGTACAAAGATGAGGC
CGAATATCTTTAGTGTAGGCACGTTAATGAAATCCCGCCAAGAAATGCTC
TCGGTGACGCCGCCACTGAGCACCTGAAGCCGAAATGTGTCAAACTCAAT
TTTAGCTGCGTCATGCTGAGAAGCTTCCTTGTCGGAGGAAGTGGGTGGTG
TCAGGTTCTTGTAGAAGTAGAAAGACTTCTCGGCCTGGTCATCGCGCCCT
CGTCTCAACAAATATTGCGGTGTCTCCG

BS17569.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:49:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14606-PA 1317 CG14606-RA 506..1317 828..17 4060 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14606-RB 1863 CG14606-RB 655..1466 828..17 4060 100 Minus
CG14606-RA 1925 CG14606-RA 717..1528 828..17 4060 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7215029..7215441 215..627 2065 100 Plus
3R 32079331 3R 7215505..7215705 628..828 1005 100 Plus
3R 32079331 3R 7214736..7214935 17..216 1000 100 Plus
Blast to na_te.dros performed on 2015-02-13 00:06:29 has no hits.

BS17569.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:49:48 Download gff for BS17569.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14606-PA 506..1317 17..828 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:53:16 Download gff for BS17569.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 717..1528 17..828 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:38:28 Download gff for BS17569.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 717..1528 17..828 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:38:28 Download gff for BS17569.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 7214736..7214933 17..214 100 <- Plus
3R 7215029..7215441 215..627 100 <- Plus
3R 7215505..7215705 628..828 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:53:16 Download gff for BS17569.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3040458..3040655 17..214 100 <- Plus
arm_3R 3040751..3041163 215..627 100 <- Plus
arm_3R 3041227..3041427 628..828 100   Plus

BS17569.5prime Sequence

897 bp (771 high quality bases) assembled on 2007-05-15

> BS17569.5prime
GAAGTTATCAGTCGACATGACACTGACCCATGGAATTGCCGTGGGATGGC
TGTCTCCCTCTCTTCGACTGCTCGCATCCGACGAAAGCCCTTTGGGGGAT
CCCCTGACCATTACCCAGGCATCCTGGGTTGGATCACTTATCGGCCTAGG
CTCGCTGACCGGCAATATAATCTTTGGACTGCTACTCGATCGATTGGGCC
GTAAAGTGTGCATGTATTTCCTGGCCATACCCAATATGATCTACTGGATC
CTTATCTACTCCGCCCAAGACGTTACGTATCTGTATGCTGGTCGATTCCT
GGCGGGAATGTCCGGAGGTGGCTGTTACGTCGTCTTGCCCATATTCATAG
CTGAAATAGCCGACAATAGCGTTCGGGGAGCGTTATCGTCCATGGCCATG
ATGTACGTTAGCATCGGCATGATGGTTGGCTTTACATTAGCCTCGTATCT
CCCGTACTATCTGATGCCGTGCATTATCGTTGCTCTGCCGGTGGTGTTTA
TGTTGTCAGTTATTGGCTTATCGGAGACACCGCAATATTTGTTGAGACGA
GGGCGCGATGACCAGGCCGAGAAGTCTTTCTACTTCTACAAGAACCTGAC
ACCACCCACTTCCTCCGACAAGGAAGCTTCTCAGCATGACGCAGCTAAAA
TTGAGTTTGACACATTTCGGCTTCAGGTGCTCAGTGGCGGCGTCACCGAG
AGCATTTCTTGGCGGGATTTCATTAACGTGCCTACACTAAAGATATTCGG
CCTCATCTTTGTACTGATCATCTGNCATCAGCTGTCAGGGAGCTTCGCCA
TCTTCAACTACACATCGCACATTTTTGCTGAGCTAGGCAACAATCTGGAT
CCAAACACCCAGCACATTGTGGTCGGAGCTGCACAGCTGGTGGGAAT

BS17569.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14606-PA 1317 CG14606-RA 1..843 17..859 4171 99.7 Plus
CG14606-PA 1317 CG14606-RA 849..881 865..897 165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:47:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14606-RB 1863 CG14606-RB 150..1030 17..897 4334 99.5 Plus
CG14606-RA 1925 CG14606-RA 212..1092 17..897 4334 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7215505..7215859 722..368 1775 100 Minus
3R 32079331 3R 7215267..7215441 897..723 774 96 Minus
3R 32079331 3R 7216383..7216514 369..238 660 100 Minus
3R 32079331 3R 7216592..7216704 238..126 565 100 Minus
3R 32079331 3R 7216762..7216872 127..17 555 100 Minus
Blast to na_te.dros performed on 2015-02-11 03:47:39 has no hits.

BS17569.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:43:45 Download gff for BS17569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14606-PA 1..881 17..897 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:26:51 Download gff for BS17569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 212..1092 17..897 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:29:58 Download gff for BS17569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14606-RA 212..1092 17..897 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:29:58 Download gff for BS17569.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 7215267..7215441 723..897 97 <- Minus
3R 7215505..7215857 370..722 100 <- Minus
3R 7216383..7216513 239..369 100 <- Minus
3R 7216592..7216703 127..238 100 <- Minus
3R 7216763..7216872 17..126 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:26:51 Download gff for BS17569.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3041227..3041579 370..722 100 <- Minus
arm_3R 3040989..3041163 723..897 97 <- Minus
arm_3R 3042105..3042235 239..369 100 <- Minus
arm_3R 3042314..3042425 127..238 100 <- Minus
arm_3R 3042485..3042594 17..126 100   Minus

BS17569.pep Sequence

Translation from 16 to 1332

> BS17569.pep
MTLTHGIAVGWLSPSLRLLASDESPLGDPLTITQASWVGSLIGLGSLTGN
IIFGLLLDRLGRKVCMYFLAIPNMIYWILIYSAQDVTYLYAGRFLAGMSG
GGCYVVLPIFIAEIADNSVRGALSSMAMMYVSIGMMVGFTLASYLPYYLM
PCIIVALPVVFMLSVIGLSETPQYLLRRGRDDQAEKSFYFYKNLTPPTSS
DKEASQHDAAKIEFDTFRLQVLSGGVTESISWRDFINVPTLKIFGLIFVL
IICNQLSGSFAIFNYTSHIFAELGNNLDPNTSTIVVGAAQLVGIFSAVVL
VDRLGRRVLLLTSMGGMGLGELAIALLKCFASDEFLNQNGWLPLVIMCLV
ACIASLGVIALIFIIIIELLPAKIRSIGTSLSMATFSGFIFVALKIYPTM
IYDQGLAATMFMSAGMCLFGFIVLGLFLPETKGKLMTH*

BS17569.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:59:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14606-PB 438 CG14606-PB 1..438 1..438 2220 100 Plus
CG14606-PA 438 CG14606-PA 1..438 1..438 2220 100 Plus
CG14605-PD 432 CG14605-PD 1..431 1..437 1139 49.7 Plus
CG14605-PB 432 CG14605-PB 1..431 1..437 1139 49.7 Plus
CG33282-PB 460 CG33282-PB 27..457 1..436 932 41.8 Plus