Clone BS17572 Report

Search the DGRC for BS17572

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:175
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG15661-RA
Protein status:BS17572.pep: full length peptide match
Sequenced Size:1625

Clone Sequence Records

BS17572.complete Sequence

1625 bp assembled on 2009-12-08

GenBank Submission: KX805078

> BS17572.complete
GAAGTTATCACTCGACATGCAGTTTCCATTATTATTTGGCCTCCTTCTGA
CTGGAACATTATATTCCCAGTTGGAATTGGCCGAAGGATCAAAAATCCTG
GCTGTGTATGCCTTTCCGGGAAAATCACATTTTATGATGCACACTGCTTT
GATAAGGGAACTTGTCGAAAGTGGTCATCAGGTGACCATGGTAACAGCTT
TTAGTCTGGAGAAAGAGCAACTTGGCAGCAACTACACGGAGATCTTGATA
GAACCGGTCTACGATTTCTGGCACGATGTTAAGCTGAACTTTGGAGCCCA
ACACCTATTCGAGCTGACCCGCATGACCAACTATGATTTCCTCAAAATGC
TGGAGATTATCGGCCTCAAGACCACCGAACATGCCCTGCGGCAGCCCAAG
GTTCGGTCTCTCATTCATGCCGAGCAAAAGGAAGGAGTCTTCGATCTTCT
CCTGGCCGAGCAGTTCTATCAGGAGGCCTTCTTGGCACTGGCTCATCTGT
ACAAAATACCCGTGGTGACCACGAGCACTTTGGGCTATGAGAATCACATG
AGTCAGATGATGGGTCTGATTACACCTTGGTCCTTTGTACCACACGGTTT
TATGCCCTTCACCGATCGCATGAGTTTCCTGGAGAGGGTGAAGAACTCCT
ATGCATCCTTCTACGAAGACATGGACAGGCTGCTAAACTATTTTCCGAAA
ATGGATGCGGTGGCCAGGGAGTTCTTTGGACCCGTACTGACCGAGGTGCC
CAAGGTCAAGCACATGGAGCGTCAAATCTCAGTGATGCTACTAAACAGTC
ACGCACCGCTGACCACGGCACGTCCCACAGTGGACGCCATGGTGCCAGTG
GGCGGGATGCACATCTATCCACCCAAACCGCTGCCGGCTGACATGCAAGC
CCTCTTGGATGGCGCCACCGAGGGGGCCATCTTCTTCAGCCTGGGCAGCA
ATGTCCAGAGCAAGGACATGCCCGTGGAAATGCTGCGATTGTTCCTGCAG
GTATTCGGTTCGCTCAAGCAGCGGGTATTGTGGAAATTCGAGGATGAGAG
CATTAGCCAATTGCCAGATAACGTGATGGTCAGGAAGTGGCTGCCACAGG
CCGACATTCTGGCCCATCGTCATGTGAAGGTATTCATTACCCACGGTGGC
TTATTTGGCACCCAGGAGGGAGTGCATTATGCTGTGCCCATGCTGGGTAT
ACCCTTCTACTGTGATCAGCACCTTAATATGAACAAAGCGGTTTTGGGCG
GATATGCCATTAGTCTGCACTTCCAATCGATTACCGAGGAAATCCTGCGG
CACTCCTTGGACCAACTTATCCATAATGTGACCTACAAAGAGAACGTTCA
GAGGGTATCGGATATTTTCCGCGATCGTCCGCTGGAGCCGCGAAAAAGTG
CCGTCTATTGGATCGAATATGTCATCCGGCATCGAGGTGCTTCACATATG
AGATCCGCAGGCCTGGATCTCAACTGGTTCCAATTCTATTTGCTGGATGT
CATAGCATTTGTGGCTATCATTGCTTTAGCTGGCGTCATGGCTCTCTCAT
TGGCCATTCGATTACTGATGGGCAGTAATAAGAAACACAGGAAAGCTAAG
CAAAATTAAAAGCTTTCTAGACCAT

BS17572.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15661-RB 1593 CG15661-PB 1..1593 17..1609 7965 100 Plus
CG15661-RA 1593 CG15661-PA 1..1593 17..1609 7965 100 Plus
CG4302-RA 1599 CG4302-PA 1081..1205 1097..1221 205 77.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15661-RB 1899 CG15661-RB 223..1816 17..1610 7970 100 Plus
CG15661-RA 1824 CG15661-RA 148..1741 17..1610 7970 100 Plus
CG4302-RA 1754 CG4302-RA 1148..1272 1097..1221 205 77.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21215971..21216449 1219..741 2395 100 Minus
2R 25286936 2R 21216506..21216968 740..278 2315 100 Minus
2R 25286936 2R 21215518..21215911 1610..1217 1970 100 Minus
2R 25286936 2R 21217016..21217175 278..119 800 100 Minus
2R 25286936 2R 21217232..21217339 124..17 525 99.1 Minus
2R 25286936 2R 21213362..21213486 1221..1097 205 77.6 Minus
2L 23513712 2L 18512780..18512930 1073..1223 185 74.8 Plus
Blast to na_te.dros performed on 2014-11-28 02:00:32 has no hits.

BS17572.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:20 Download gff for BS17572.complete
Subject Subject Range Query Range Percent Splice Strand
CG15661-RB 197..1781 17..1601 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:29 Download gff for BS17572.complete
Subject Subject Range Query Range Percent Splice Strand
CG15661-RA 148..1732 17..1601 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:02:48 Download gff for BS17572.complete
Subject Subject Range Query Range Percent Splice Strand
CG15661-RB 197..1781 17..1601 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:50 Download gff for BS17572.complete
Subject Subject Range Query Range Percent Splice Strand
CG15661-RA 148..1732 17..1601 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:50 Download gff for BS17572.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21215527..21215908 1220..1601 100 <- Minus
2R 21215971..21216449 741..1219 100 <- Minus
2R 21216506..21216967 279..740 100 <- Minus
2R 21217016..21217174 120..278 100 <- Minus
2R 21217237..21217339 17..119 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:29 Download gff for BS17572.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17103032..17103413 1220..1601 100 <- Minus
arm_2R 17103476..17103954 741..1219 100 <- Minus
arm_2R 17104011..17104472 279..740 100 <- Minus
arm_2R 17104521..17104679 120..278 100 <- Minus
arm_2R 17104742..17104844 17..119 100   Minus

BS17572.3prime Sequence

846 bp (797 high quality bases) assembled on 2007-05-15

> BS17572.3prime
ATGGTCTAGAAAGCTTTTAATTTTGCTTAGCTTTCCTGTGTTTCTTATTA
CTGCCCATCAGTAATCGAATGGCCAATGAGAGAGCCATGACGCCAGCTAA
AGCAATGATAGCCACAAATGCTATGACATCCAGCAAATAGAATTGGAACC
AGTTGAGATCCAGGCCTGCGGATCTCATATGTGAAGCACCTCGATGCCGG
ATGACATATTCGATCCAATAGACGGCACTTTTTCGCGGCTCCAGCGGACG
ATCGCGGAAAATATCCGATACCCTCTGAACGTTCTCTTTGTAGGTCACAT
TATGGATAAGTTGGTCCAAGGAGTGCCGCAGGATTTCCTCGGTAATCGAT
TGGAAGTGCAGACTAATGGCATATCCGCCCAAAACCGCTTTGTTCATATT
AAGGTGCTGATCACAGTAGAAGGGTATACCCAGCATGGGCACAGCATAAT
GCACTCCCTCCTGGGTGCCAAATAAGCCACCGTGGGTAATGAATACCTTC
ACATGACGATGGGCCAGAATGTCGGCCTGTGGCAGCCACTTCCTGACCAT
CACGTTATCTGGCAATTGGCTAATGCTCTCATCCTCGAATTTCCACAATA
CCCGCTGCTTGAGCGAACCGAATACCTGCAGGAACAATCGCAGCATTTCC
ACGGGCATGTCCTTGCTCTGGACATTGCTGCCCAGGCTGAAGAAGATGGC
CCCCTCGGTGGCGCCATCCAAGAGGGCTTGCATGTCAGCCGGCAGCGGTT
TGGGTGGATAGATGTGCATCCCGCCCACTGGCACCATGGCGTCCACTGTG
GGACGTGCCGTGGTCAGCGGTGCGTGACTGTTTAGTAGCATCACTG

BS17572.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG15661-PA 1593 CG15661-RA 764..1593 846..17 4150 100 Minus
CG15661-PB 1593 CG15661-RB 764..1593 846..17 4150 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15661-RB 1899 CG15661-RB 986..1816 846..16 4155 100 Minus
CG15661-RA 1824 CG15661-RA 911..1741 846..16 4155 100 Minus
CG4302-RA 1754 CG4302-RA 1082..1272 595..405 215 75.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21215971..21216410 407..846 2200 100 Plus
2R 25286936 2R 21215518..21215911 16..409 1970 100 Plus
2R 25286936 2R 21213362..21213486 405..529 205 77.6 Plus
2L 23513712 2L 18512780..18512930 553..403 185 74.8 Minus
Blast to na_te.dros performed on 2015-02-12 00:20:13 has no hits.

BS17572.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:53:14 Download gff for BS17572.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15661-PB 764..1593 17..846 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:31:36 Download gff for BS17572.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15661-RA 911..1749 7..846 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:00:30 Download gff for BS17572.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15661-RA 911..1749 7..846 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:00:30 Download gff for BS17572.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21215510..21215908 7..406 99 <- Plus
2R 21215971..21216410 407..846 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:31:36 Download gff for BS17572.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17103015..17103413 7..406 99 <- Plus
arm_2R 17103476..17103915 407..846 100   Plus

BS17572.5prime Sequence

869 bp (740 high quality bases) assembled on 2007-05-15

> BS17572.5prime
GAAGTTATCACTCGACATGCAGTTTCCATTATTATTTGGCCTCCTTCTGA
CTGGAACATTATATTCCCAGTTGGAATTGGCCGAAGGATCAAAAATCCTG
GCTGTGTATGCCTTTCCGGGAAAATCACATTTTATGATGCACACTGCTTT
GATAAGGGAACTTGTCGAAAGTGGTCATCAGGTGACCATGGTAACAGCTT
TTAGTCTGGAGAAAGAGCAACTTGGCAGCAACTACACGGAGATCTTGATA
GAACCGGTCTACGATTTCTGGCACGATGTTAAGCTGAACTTTGGAGCCCA
ACACCTATTCGAGCTGACCCGCATGACCAACTATGATTTCCTCAAAATGC
TGGAGATTATCGGCCTCAAGACCACCGAACATGCCCTGCGGCAGCCCAAG
GTTCGGTCTCTCATTCATGCCGAGCAAAAGGAAGGAGTCTTCGATCTTCT
CCTGGCCGAGCAGTTCTATCAGGAGGCCTTCTTGGCACTGGCTCATCTGT
ACAAAATACCCGTGGTGACCACGAGCACTTTGGGCTATGAGAATCACATG
AGTCAGATGATGGGTCTGATTACACCTTGGTCCTTTGTACCACACGGTTT
TATGCCCTTCACCGATCGCATGAGTTTCCTGGAGAGGGTGAAGAACTCCT
ATGCATCCTTCTACGAAGACATGGACAGGCTGCTAAACTATTTTCCGAAN
ATGGATGCGGTGGCCAGGGAGTTCTTTGGACCCGTACTGACCGAGGTGCC
CAAGGTCAAGCACATGGAGCGTCAAATCTCAGTGATGCTACTAAACAGTC
ACGCACCGCTGACCACGGCACGTCCCACAGTGGACGCCATGGTGCCAGTG
GGCGGGATGCACATCTATC

BS17572.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG15661-PA 1593 CG15661-RA 1..853 17..869 4246 99.8 Plus
CG15661-PB 1593 CG15661-RB 1..853 17..869 4246 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG15661-RB 1899 CG15661-RB 223..1075 17..869 4254 99.9 Plus
CG15661-RA 1824 CG15661-RA 148..1000 17..869 4254 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:15:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21216506..21216968 740..278 2304 99.8 Minus
2R 25286936 2R 21217016..21217175 278..119 800 100 Minus
2R 25286936 2R 21216321..21216449 869..741 645 100 Minus
2R 25286936 2R 21217232..21217339 124..17 525 99.1 Minus
Blast to na_te.dros performed on 2015-02-11 16:15:29 has no hits.

BS17572.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:46:51 Download gff for BS17572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15661-PB 1..853 17..869 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:49:36 Download gff for BS17572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15661-RA 142..1000 11..869 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:41:07 Download gff for BS17572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15661-RA 142..1000 11..869 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:41:07 Download gff for BS17572.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21216321..21216449 741..869 100 <- Minus
2R 21216506..21216967 279..740 99 <- Minus
2R 21217016..21217174 120..278 100 <- Minus
2R 21217237..21217345 11..119 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:49:36 Download gff for BS17572.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17103826..17103954 741..869 100 <- Minus
arm_2R 17104011..17104472 279..740 99 <- Minus
arm_2R 17104521..17104679 120..278 100 <- Minus
arm_2R 17104742..17104850 11..119 97   Minus

BS17572.pep Sequence

Translation from 16 to 1608

> BS17572.pep
MQFPLLFGLLLTGTLYSQLELAEGSKILAVYAFPGKSHFMMHTALIRELV
ESGHQVTMVTAFSLEKEQLGSNYTEILIEPVYDFWHDVKLNFGAQHLFEL
TRMTNYDFLKMLEIIGLKTTEHALRQPKVRSLIHAEQKEGVFDLLLAEQF
YQEAFLALAHLYKIPVVTTSTLGYENHMSQMMGLITPWSFVPHGFMPFTD
RMSFLERVKNSYASFYEDMDRLLNYFPKMDAVAREFFGPVLTEVPKVKHM
ERQISVMLLNSHAPLTTARPTVDAMVPVGGMHIYPPKPLPADMQALLDGA
TEGAIFFSLGSNVQSKDMPVEMLRLFLQVFGSLKQRVLWKFEDESISQLP
DNVMVRKWLPQADILAHRHVKVFITHGGLFGTQEGVHYAVPMLGIPFYCD
QHLNMNKAVLGGYAISLHFQSITEEILRHSLDQLIHNVTYKENVQRVSDI
FRDRPLEPRKSAVYWIEYVIRHRGASHMRSAGLDLNWFQFYLLDVIAFVA
IIALAGVMALSLAIRLLMGSNKKHRKAKQN*

BS17572.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:54:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG15661-PB 530 CG15661-PB 1..530 1..530 2750 100 Plus
CG15661-PA 530 CG15661-PA 1..530 1..530 2750 100 Plus
CG4302-PA 532 CG4302-PA 11..515 10..515 1449 53.4 Plus
CG6475-PD 526 CG6475-PD 13..503 19..510 1306 50.6 Plus
CG10178-PB 530 CG10178-PB 15..512 15..522 1088 42.8 Plus