Clone Sequence Records
BS17581.complete Sequence
1307 bp assembled on 2009-12-07
GenBank Submission: KX802375
> BS17581.complete
GAAGTTATCAGTCGACATGGCACTTTCCGCAACGAAGGACACTAGTCCAT
GGACCAACATGGTGAAGAGGGTAACAGCGAGCAAATACGATGTAGTCTCG
GTCAAGACGCTGCTGATGTTTATCAACAGCAAACTGGATTGCGAATTGCG
AGGCTTTGAGGATCTGAAAACAGGAGCAGTATATTGCCAACTGATGCACA
GACTCTTTCCCAATTCGATACAAATTCATAAGGTCAAGTTTTATACGAAC
GACATCAGCGACTTTCAGTTAAATTTCCGGTTACTAAACAATTGCTTTCA
AAAACTAAGAGTAACCGTTTATATGCCAGTGCATGAGTTAACTCTGGGAC
ACAATCAAGTGGTCTTCTGCAATTGGATATACAAGTTCTATGAAGCAAAC
GACAAGGGGAACGAATACGATGCCAGAAAGGTGAGAAAAGGCTCGCCAAT
CGGTTTAGACAATAGTTATAAGGTAGCCTCCATCTCAACTGGCAGCACCT
GTTCAGTGCATAAATGCCAGTCGATGGTCTTTAATTATGCAAAAAAGCCC
GTCCGATTCGAGAGGCAAAACAGCCTCGATGCTCTATCATTCAGACCGGG
CATCTTTAAGAGTATTCGTAGGGAGAAGCCAACCGAACAGGCGAATCCAG
AACCACAGCAGACAAAGAATATCAAAAAGTCCTCACAATTCCTTGCCGAG
AGCAAGCACGTTTCTCTGCCATCGGATAGCGAAGATGAGTTGGAACTTAA
AGCCCAAAAACGTTATTTGCAAGATCAGTTTGTGAAAAAGCTCAATAGCA
GTAAGAATGATGAGAAGACTGGCACAGACGCAACGTCAAAAATCTCGGAA
ATTCCAAGACCAAATCCAGAAAACGAGCAACTAAACACTGTATGCGAAAA
GTATGAGCAGGAAACGAGTGATCTGCGATCCAATCTTAATTTGATCGACA
AACTAGAATTACAGCTACAAAACTTACAGATTGATAAGGAAAAGCTGACC
AACAAGTTGTCACGCGTGGAGTCAATATTAAACAAACACGATTTAAATCC
AGAAAAAGCTGTTCTAAAATTAAGAAAATTGCTATTGAACCAAGCACAAA
CGGCAAGAGTGCATCCGCGTAAAGCGGATACACTTATTGATGAAGATGAA
TTAACCAAGAAAGAAGAATTCAAGTCTTGCACGGAATTTTCTCGTCAGGA
AGACGTTAAGTTGACGCCAACTCAAATAAAAAATCAAAAATCAAATACTA
GGTGTTCGCAAACTAAGGTCAGAAAGAGCCTAAAGGTTTGAAAGCTTTCT
AGACCAT
BS17581.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:45:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-RB | 1275 | CG31907-PB | 1..1275 | 17..1291 | 6375 | 100 | Plus |
| CG31907-RA | 1275 | CG31907-PA | 1..1275 | 17..1291 | 6375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-RB | 1574 | CG31907-RB | 78..1353 | 16..1291 | 6380 | 100 | Plus |
| CG31907-RA | 1470 | CG31907-RA | 78..1353 | 16..1291 | 6380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7059435..7060710 | 1291..16 | 6380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:45:39 has no hits.
BS17581.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:27:19 Download gff for
BS17581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 1..1275 | 17..1291 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:39:18 Download gff for
BS17581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 79..1352 | 17..1290 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:56:58 Download gff for
BS17581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 79..1352 | 17..1290 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:27:19 Download gff for
BS17581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 56..1339 | 10..1295 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:11 Download gff for
BS17581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 79..1352 | 17..1290 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:11 Download gff for
BS17581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7059436..7060709 | 17..1290 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:56:58 Download gff for
BS17581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7059436..7060709 | 17..1290 | 100 | | Minus |
BS17581.3prime Sequence
873 bp (800 high quality bases) assembled on 2007-05-15
> BS17581.3prime
ATGGTCTAGAAAGCTTTCAAACCTTTAGGCTCTTTCTGACCTTAGTTTGC
GAACACCTAGTATTTGATTTTTGATTTTTTATTTGAGTTGGCGTCAACTT
AACGTCTTCCTGACGAGAAAATTCCGTGCAAGACTTGAATTCTTCTTTCT
TGGTTAATTCATCTTCATCAATAAGTGTATCCGCTTTACGCGGATGCACT
CTTGCCGTTTGTGCTTGGTTCAATAGCAATTTTCTTAATTTTAGAACAGC
TTTTTCTGGATTTAAATCGTGTTTGTTTAATATTGACTCCACGCGTGACA
ACTTGTTGGTCAGCTTTTCCTTATCAATCTGTAAGTTTTGTAGCTGTAAT
TCTAGTTTGTCGATCAAATTAAGATTGGATCGCAGATCACTCGTTTCCTG
CTCATACTTTTCGCATACAGTGTTTAGTTGCTCGTTTTCTGGATTTGGTC
TTGGAATTTCCGAGATTTTTGACGTTGCGTCTGTGCCAGTCTTCTCATCA
TTCTTACTGCTATTGAGCTTTTTCACAAACTGATCTTGCAAATAACGTTT
TTGGGCTTTAAGTTCCAACTCATCTTCGCTATCCGATGGCAGAGAAACGT
GCTTGCTCTCGGCAAGGAATTGTGAGGACTTTTTGATATTCTTTGTCTGC
TGTGGTTCTGGATTCGCCTGTTCGGTTGGCTTCTCCCTACGAATACTCTT
AAAGATGCCCGGTCTGAATGATAGAGCATCGAGGCTGTTTTGCCTCTCGA
ATCGGACGGGCTTTTTTGCATAATTAAAGACCATCGACTGGCATTTATGC
ACTGAACAGGTGCTGCCAGTTGAGATGGAGGCTACCTTATAACTATTGTC
TAAACCGATTGGCGAGCCTTTTC
BS17581.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:50:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-PA | 1275 | CG31907-RA | 419..1275 | 873..17 | 4285 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:20:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-RB | 1574 | CG31907-RB | 497..1353 | 873..17 | 4285 | 100 | Minus |
| CG31907-RA | 1470 | CG31907-RA | 497..1353 | 873..17 | 4285 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:20:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7059435..7060291 | 17..873 | 4285 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:20:47 has no hits.
BS17581.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:50:15 Download gff for
BS17581.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-PA | 419..1275 | 17..873 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:13:19 Download gff for
BS17581.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 497..1356 | 13..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:57:49 Download gff for
BS17581.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 497..1356 | 13..873 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:57:49 Download gff for
BS17581.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7059432..7060291 | 13..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:13:19 Download gff for
BS17581.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7059432..7060291 | 13..873 | 99 | | Plus |
BS17581.5prime Sequence
844 bp (745 high quality bases) assembled on 2007-05-15
> BS17581.5prime
GAAGTTATCAGTCGACATGGCACTTTCCGCAACGAAGGACACTAGTCCAT
GGACCAACATGGTGAAGAGGGTAACAGCGAGCAAATACGATGTAGTCTCG
GTCAAGACGCTGCTGATGTTTATCAACAGCAAACTGGATTGCGAATTGCG
AGGCTTTGAGGATCTGAAAACAGGAGCAGTATATTGCCAACTGATGCACA
GACTCTTTCCCAATTCGATACAAATTCATAAGGTCAAGTTTTATACGAAC
GACATCAGCGACTTTCAGTTAAATTTCCGGTTACTAAACAATTGCTTTCA
AAAACTAAGAGTAACCGTTTATATGCCAGTGCATGAGTTAACTCTGGGAC
ACAATCAAGTGGTCTTCTGCAATTGGATATACAAGTTCTATGAAGCAAAC
GACAAGGGGAACGAATACGATGCCAGAAAGGTGAGAAAAGGCTCGCCAAT
CGGTTTAGACAATAGTTATAAGGTAGCCTCCATCTCAACTGGCAGCACCT
GTTCAGTGCATAAATGCCAGTCGATGGTCTTTAATTATGCAAAAAAGCCC
GTCCGATTCGAGAGGCAAAACAGCCTCGATGCTCTATCATTCAGACCGGG
CATCTTTAAGAGTATTCGTAGGGAGAAGCCAACCGAACAGGCGAATCCAG
AACCACAGCAGACAAAGAATATCAAAAAGTCCTCACAATTCCTTGCCGAG
AGCAAGCACGTTTCTCTGCCATCGGATAGCGAAGATGAGTTGGAACTTAA
AGCCCAAAAACGTTATTTGCAAGATCAGTTTGTGAAAAAGCTCAATAGCA
GTAAGAATGATGAGAAGACTGGCACAGACGCAACGTCAAAAATC
BS17581.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:44:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-PA | 1275 | CG31907-RA | 1..828 | 17..844 | 4140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:44:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-RB | 1574 | CG31907-RB | 78..906 | 16..844 | 4145 | 100 | Plus |
| CG31907-RA | 1470 | CG31907-RA | 78..906 | 16..844 | 4145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:44:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7059882..7060710 | 844..16 | 4145 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:44:23 has no hits.
BS17581.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:44:12 Download gff for
BS17581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-PA | 1..828 | 17..844 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:17:14 Download gff for
BS17581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 73..906 | 10..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:41:19 Download gff for
BS17581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 73..906 | 10..844 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:41:19 Download gff for
BS17581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7059882..7060713 | 11..844 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:17:14 Download gff for
BS17581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7059882..7060713 | 11..844 | 99 | <- | Minus |
BS17581.pep Sequence
Translation from 16 to 1290
> BS17581.pep
MALSATKDTSPWTNMVKRVTASKYDVVSVKTLLMFINSKLDCELRGFEDL
KTGAVYCQLMHRLFPNSIQIHKVKFYTNDISDFQLNFRLLNNCFQKLRVT
VYMPVHELTLGHNQVVFCNWIYKFYEANDKGNEYDARKVRKGSPIGLDNS
YKVASISTGSTCSVHKCQSMVFNYAKKPVRFERQNSLDALSFRPGIFKSI
RREKPTEQANPEPQQTKNIKKSSQFLAESKHVSLPSDSEDELELKAQKRY
LQDQFVKKLNSSKNDEKTGTDATSKISEIPRPNPENEQLNTVCEKYEQET
SDLRSNLNLIDKLELQLQNLQIDKEKLTNKLSRVESILNKHDLNPEKAVL
KLRKLLLNQAQTARVHPRKADTLIDEDELTKKEEFKSCTEFSRQEDVKLT
PTQIKNQKSNTRCSQTKVRKSLKV*
BS17581.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:59:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-PB | 424 | CG31907-PB | 1..424 | 1..424 | 2185 | 100 | Plus |
| CG31907-PA | 424 | CG31907-PA | 1..424 | 1..424 | 2185 | 100 | Plus |
| Eb1-PE | 290 | CG3265-PE | 20..205 | 32..222 | 236 | 31.1 | Plus |
| Eb1-PG | 291 | CG3265-PG | 20..206 | 32..222 | 236 | 32.1 | Plus |
| Eb1-PA | 291 | CG3265-PA | 20..206 | 32..222 | 236 | 32.1 | Plus |
